ARCtrl 2.2.2__tar.gz → 2.2.3__tar.gz
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- {arctrl-2.2.2 → arctrl-2.2.3}/PKG-INFO +2 -2
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/CWL/cwltypes.py +18 -18
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/CWL/decode.py +52 -52
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/Core/Helper/hash_codes.py +3 -3
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/Core/Helper/identifier.py +2 -2
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/Core/Process/component.py +2 -2
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/Core/Process/protocol_parameter.py +2 -2
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/Core/Table/composite_column.py +6 -6
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/Core/Table/composite_header.py +6 -6
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/Core/arc_types.py +96 -96
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/Core/conversion.py +86 -86
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/FileSystem/file_system_tree.py +29 -29
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/Json/DataMap/data_context.py +24 -24
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/Json/DataMap/data_map.py +6 -6
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/Json/Process/factor.py +19 -19
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/Json/Process/factor_value.py +18 -18
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/Json/Process/material.py +46 -46
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/Json/Process/material_type.py +6 -6
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/Json/Process/process.py +30 -30
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/Json/Process/process_output.py +8 -8
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/Json/Process/protocol.py +75 -75
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/Json/Process/protocol_parameter.py +13 -13
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/Json/Process/sample.py +28 -28
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/Json/Process/study_materials.py +6 -6
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/Json/Table/arc_table.py +104 -104
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/Json/Table/oatable.py +10 -10
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/Json/Table/templates.py +65 -65
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/Json/context/rocrate/isa_assay_context.py +19 -19
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/Json/context/rocrate/isa_comment_context.py +11 -11
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/Json/context/rocrate/isa_component_context.py +15 -15
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/Json/context/rocrate/isa_data_context.py +14 -14
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/Json/context/rocrate/isa_factor_context.py +14 -14
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/Json/context/rocrate/isa_factor_value_context.py +17 -17
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/Json/context/rocrate/isa_investigation_context.py +12 -12
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/Json/context/rocrate/isa_material_attribute_context.py +12 -12
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/Json/context/rocrate/isa_material_attribute_value_context.py +12 -12
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/Json/context/rocrate/isa_material_context.py +4 -4
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/Json/context/rocrate/isa_protocol_context.py +7 -7
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/Json/context/rocrate/isa_protocol_parameter_context.py +5 -5
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/Json/context/rocrate/property_value_context.py +17 -17
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/Json/context/rocrate/rocrate_context.py +13 -13
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/Json/converter_options.py +2 -2
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/Json/data_file.py +8 -8
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/Json/decode.py +8 -8
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/Json/encode.py +8 -8
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/Json/idtable.py +4 -4
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/Json/investigation.py +188 -188
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/Json/ldobject.py +54 -54
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/Json/ontology_annotation.py +38 -38
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/Json/person.py +106 -106
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/Json/property_value.py +50 -50
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/Json/publication.py +37 -37
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/JsonIO/Process/process_sequence.py +6 -6
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/JsonIO/Process/study_materials.py +6 -6
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/ROCrate/ISAProfile/assay.py +4 -4
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/ROCrate/ISAProfile/investigation.py +4 -4
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/ROCrate/ISAProfile/lab_process.py +4 -4
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/ROCrate/ISAProfile/lab_protocol.py +2 -2
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/ROCrate/ISAProfile/scholarly_article.py +6 -6
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/ROCrate/ISAProfile/study.py +4 -4
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/ROCrate/arc_rocrate_metadata.py +2 -2
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/Spreadsheet/AnnotationTable/composite_cell.py +8 -7
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/Spreadsheet/AnnotationTable/composite_column.py +21 -38
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/Spreadsheet/DataMapTable/data_map_column.py +25 -25
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/Spreadsheet/DataMapTable/data_map_header.py +42 -42
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/Spreadsheet/Metadata/contacts.py +10 -10
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/Spreadsheet/Metadata/conversions.py +6 -6
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/Spreadsheet/Metadata/ontology_annotation.py +8 -8
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/Spreadsheet/Metadata/protocols.py +9 -9
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/Spreadsheet/Metadata/publication.py +10 -10
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/Spreadsheet/Metadata/sparse_table.py +34 -34
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/Spreadsheet/template.py +37 -33
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/ValidationPackages/validation_package.py +10 -10
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/ValidationPackages/validation_packages_config.py +20 -20
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/Yaml/validation_package.py +15 -15
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/Yaml/validation_packages_config.py +16 -16
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/fable_modules/fs_spreadsheet/Cells/fs_cells_collection.py +31 -31
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/fable_modules/fs_spreadsheet/Json/cell.py +20 -20
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/fable_modules/fs_spreadsheet/Json/column.py +2 -2
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/fable_modules/fs_spreadsheet/Json/row.py +12 -12
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/fable_modules/fs_spreadsheet/Json/table.py +4 -4
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/fable_modules/fs_spreadsheet/Json/worksheet.py +4 -4
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/fable_modules/fs_spreadsheet/Ranges/fs_range_address.py +2 -2
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/fable_modules/fs_spreadsheet/Ranges/fs_range_column.py +2 -2
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/fable_modules/fs_spreadsheet/Ranges/fs_range_row.py +2 -2
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/fable_modules/fs_spreadsheet/Tables/fs_table_row.py +2 -2
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/fable_modules/fs_spreadsheet/fs_column.py +16 -16
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/fable_modules/fs_spreadsheet/fs_row.py +16 -16
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/fable_modules/thoth_json_python/encode.py +2 -2
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/fable_modules/yamlicious/decode.py +20 -20
- {arctrl-2.2.2 → arctrl-2.2.3}/pyproject.toml +2 -2
- {arctrl-2.2.2 → arctrl-2.2.3}/README.md +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/CWL/__init__.py +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/CWL/encode.py +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/CWL/inputs.py +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/CWL/outputs.py +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/CWL/requirements.py +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/CWL/tool_description.py +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/CWL/workflow_description.py +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/CWL/workflow_steps.py +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/Contract/__init__.py +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/Contract/arc.py +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/Contract/arc_assay.py +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/Contract/arc_investigation.py +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/Contract/arc_study.py +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/Contract/contract.py +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/Contract/datamap.py +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/Contract/git.py +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/Contract/validation_packages_config.py +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/Core/Helper/__init__.py +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/Core/Helper/collections_.py +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/Core/Helper/printer.py +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/Core/Helper/regex.py +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/Core/Helper/sem_ver.py +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/Core/Helper/url.py +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/Core/Process/__init__.py +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/Core/Process/column_index.py +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/Core/Process/factor.py +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/Core/Process/factor_value.py +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/Core/Process/material.py +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/Core/Process/material_attribute.py +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/Core/Process/material_attribute_value.py +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/Core/Process/material_type.py +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/Core/Process/process.py +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/Core/Process/process_input.py +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/Core/Process/process_output.py +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/Core/Process/process_parameter_value.py +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/Core/Process/process_sequence.py +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/Core/Process/protocol.py +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/Core/Process/sample.py +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/Core/Process/source.py +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/Core/Table/__init__.py +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/Core/Table/arc_table.py +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/Core/Table/arc_table_aux.py +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/Core/Table/arc_tables.py +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/Core/Table/composite_cell.py +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/Core/__init__.py +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/Core/comment.py +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/Core/comment_list.py +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/Core/data.py +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/Core/data_context.py +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/Core/data_file.py +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/Core/data_map.py +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/Core/identifier_setters.py +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/Core/iproperty_value.py +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/Core/ontology_annotation.py +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/Core/ontology_source_reference.py +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/Core/person.py +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/Core/publication.py +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/Core/template.py +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/Core/templates.py +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/Core/uri.py +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/Core/value.py +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/FileSystem/__init__.py +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/FileSystem/commit.py +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/FileSystem/default_gitattributes.py +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/FileSystem/default_gitignore.py +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/FileSystem/file_system.py +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/FileSystem/path.py +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/Json/DataMap/__init__.py +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/Json/Process/__init__.py +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/Json/Process/assay_materials.py +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/Json/Process/component.py +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/Json/Process/material_attribute.py +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/Json/Process/material_attribute_value.py +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/Json/Process/process_input.py +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/Json/Process/process_parameter_value.py +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/Json/Process/source.py +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/Json/Process/value.py +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/Json/Table/__init__.py +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/Json/Table/cell_table.py +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/Json/Table/composite_cell.py +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/Json/Table/composite_header.py +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/Json/Table/iotype.py +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/Json/__init__.py +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/Json/arc.py +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/Json/assay.py +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/Json/comment.py +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/Json/context/rocrate/__init__.py +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/Json/context/rocrate/isa_ontology_annotation_context.py +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/Json/context/rocrate/isa_ontology_source_reference_context.py +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/Json/context/rocrate/isa_organization_context.py +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/Json/context/rocrate/isa_person_context.py +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/Json/context/rocrate/isa_process_context.py +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/Json/context/rocrate/isa_process_parameter_value_context.py +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/Json/context/rocrate/isa_publication_context.py +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/Json/context/rocrate/isa_sample_context.py +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/Json/context/rocrate/isa_source_context.py +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/Json/context/rocrate/isa_study_context.py +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/Json/data.py +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/Json/ontology_source_reference.py +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/Json/string_table.py +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/Json/study.py +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/JsonIO/DataMap/__init__.py +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/JsonIO/DataMap/data_map.py +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/JsonIO/Process/__init__.py +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/JsonIO/Process/component.py +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/JsonIO/Process/factor.py +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/JsonIO/Process/factor_value.py +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/JsonIO/Process/material.py +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/JsonIO/Process/material_attribute.py +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/JsonIO/Process/material_attribute_value.py +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/JsonIO/Process/material_type.py +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/JsonIO/Process/process.py +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/JsonIO/Process/process_input.py +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/JsonIO/Process/process_output.py +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/JsonIO/Process/process_parameter_value.py +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/JsonIO/Process/protocol.py +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/JsonIO/Process/protocol_parameter.py +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/JsonIO/Process/sample.py +0 -0
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- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/fable_modules/fs_spreadsheet/DSL/RowBuilder.fs +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/fable_modules/fs_spreadsheet/DSL/SheetBuilder.fs +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/fable_modules/fs_spreadsheet/DSL/TableBuilder.fs +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/fable_modules/fs_spreadsheet/DSL/Transform.fs +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/fable_modules/fs_spreadsheet/DSL/Types.fs +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/fable_modules/fs_spreadsheet/DSL/WorkbookBuilder.fs +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/fable_modules/fs_spreadsheet/DSL/__init__.py +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/fable_modules/fs_spreadsheet/DSL/cell_builder.py +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/fable_modules/fs_spreadsheet/DSL/column_builder.py +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/fable_modules/fs_spreadsheet/DSL/dsl.py +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/fable_modules/fs_spreadsheet/DSL/expression.py +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/fable_modules/fs_spreadsheet/DSL/operators.py +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/fable_modules/fs_spreadsheet/DSL/row_builder.py +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/fable_modules/fs_spreadsheet/DSL/sheet_builder.py +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/fable_modules/fs_spreadsheet/DSL/table_builder.py +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/fable_modules/fs_spreadsheet/DSL/transform.py +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/fable_modules/fs_spreadsheet/DSL/types.py +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/fable_modules/fs_spreadsheet/DSL/workbook_builder.py +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/fable_modules/fs_spreadsheet/FsAddress.fs +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/fable_modules/fs_spreadsheet/FsColumn.fs +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/fable_modules/fs_spreadsheet/FsRow.fs +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/fable_modules/fs_spreadsheet/FsSpreadsheet.fsproj +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/fable_modules/fs_spreadsheet/FsWorkbook.fs +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/fable_modules/fs_spreadsheet/FsWorksheet.fs +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/fable_modules/fs_spreadsheet/Json/Cell.fs +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/fable_modules/fs_spreadsheet/Json/Column.fs +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/fable_modules/fs_spreadsheet/Json/Row.fs +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/fable_modules/fs_spreadsheet/Json/Table.fs +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/fable_modules/fs_spreadsheet/Json/Value.fs +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/fable_modules/fs_spreadsheet/Json/Workbook.fs +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/fable_modules/fs_spreadsheet/Json/Worksheet.fs +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/fable_modules/fs_spreadsheet/Json/__init__.py +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/fable_modules/fs_spreadsheet/Json/value.py +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/fable_modules/fs_spreadsheet/Json/workbook.py +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/fable_modules/fs_spreadsheet/Ranges/FsRange.fs +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/fable_modules/fs_spreadsheet/Ranges/FsRangeAddress.fs +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/fable_modules/fs_spreadsheet/Ranges/FsRangeBase.fs +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/fable_modules/fs_spreadsheet/Ranges/FsRangeColumn.fs +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/fable_modules/fs_spreadsheet/Ranges/FsRangeRow.fs +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/fable_modules/fs_spreadsheet/Ranges/__init__.py +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/fable_modules/fs_spreadsheet/Ranges/fs_range.py +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/fable_modules/fs_spreadsheet/Ranges/fs_range_base.py +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/fable_modules/fs_spreadsheet/SheetBuilder.fs +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/fable_modules/fs_spreadsheet/Tables/FsTable.fs +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/fable_modules/fs_spreadsheet/Tables/FsTableField.fs +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/fable_modules/fs_spreadsheet/Tables/FsTableRow.fs +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/fable_modules/fs_spreadsheet/Tables/__init__.py +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/fable_modules/fs_spreadsheet/Tables/fs_table.py +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/fable_modules/fs_spreadsheet/Tables/fs_table_field.py +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/fable_modules/fs_spreadsheet/__init__.py +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/fable_modules/fs_spreadsheet/fs_address.py +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/fable_modules/fs_spreadsheet/fs_workbook.py +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/fable_modules/fs_spreadsheet/fs_worksheet.py +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/fable_modules/fs_spreadsheet/obj/Debug/netstandard2.0/.NETStandard,Version=v2.0.AssemblyAttributes.fs +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/fable_modules/fs_spreadsheet/obj/Debug/netstandard2.0/FsSpreadsheet.AssemblyInfo.fs +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/fable_modules/fs_spreadsheet/obj/Release/netstandard2.0/.NETStandard,Version=v2.0.AssemblyAttributes.fs +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/fable_modules/fs_spreadsheet/obj/Release/netstandard2.0/FsSpreadsheet.AssemblyInfo.fs +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/fable_modules/fs_spreadsheet/sheet_builder.py +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/fable_modules/project_cracked.json +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/fable_modules/thoth_json_core/Decode.fs +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/fable_modules/thoth_json_core/Encode.fs +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/fable_modules/thoth_json_core/Thoth.Json.Core.fsproj +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/fable_modules/thoth_json_core/Types.fs +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/fable_modules/thoth_json_core/__init__.py +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/fable_modules/thoth_json_core/decode.py +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/fable_modules/thoth_json_core/encode.py +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/fable_modules/thoth_json_core/types.py +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/fable_modules/thoth_json_python/Decode.fs +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/fable_modules/thoth_json_python/Encode.fs +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/fable_modules/thoth_json_python/Python.fs +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/fable_modules/thoth_json_python/Thoth.Json.Python.fsproj +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/fable_modules/thoth_json_python/__init__.py +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/fable_modules/thoth_json_python/decode.py +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/fable_modules/thoth_json_python/python.py +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/fable_modules/yamlicious/Decode.fs +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/fable_modules/yamlicious/Encode.fs +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/fable_modules/yamlicious/Interop/JsInterop.fs +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/fable_modules/yamlicious/Interop/PyInterop.fs +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/fable_modules/yamlicious/Interop/__init__.py +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/fable_modules/yamlicious/Interop/js_interop.py +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/fable_modules/yamlicious/Interop/py_interop.py +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/fable_modules/yamlicious/Library.fs +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/fable_modules/yamlicious/Persil.fs +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/fable_modules/yamlicious/Preprocessing.fs +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/fable_modules/yamlicious/Reader.fs +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/fable_modules/yamlicious/Regex.fs +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/fable_modules/yamlicious/RegexActivePatterns.fs +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/fable_modules/yamlicious/Writer.fs +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/fable_modules/yamlicious/YAMLicious.fsproj +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/fable_modules/yamlicious/YAMLiciousTypes.fs +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/fable_modules/yamlicious/__init__.py +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/fable_modules/yamlicious/encode.py +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/fable_modules/yamlicious/library.py +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/fable_modules/yamlicious/obj/Debug/netstandard2.0/.NETStandard,Version=v2.0.AssemblyAttributes.fs +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/fable_modules/yamlicious/obj/Debug/netstandard2.0/YAMLicious.AssemblyInfo.fs +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/fable_modules/yamlicious/obj/Release/netstandard2.0/.NETStandard,Version=v2.0.AssemblyAttributes.fs +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/fable_modules/yamlicious/obj/Release/netstandard2.0/YAMLicious.AssemblyInfo.fs +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/fable_modules/yamlicious/persil.py +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/fable_modules/yamlicious/preprocessing.py +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/fable_modules/yamlicious/reader.py +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/fable_modules/yamlicious/regex.py +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/fable_modules/yamlicious/regex_active_patterns.py +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/fable_modules/yamlicious/writer.py +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/fable_modules/yamlicious/yamlicious_types.py +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/json.py +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/template_web.py +0 -0
- {arctrl-2.2.2 → arctrl-2.2.3}/arctrl/xlsx.py +0 -0
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Metadata-Version: 2.1
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Name: ARCtrl
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Summary: Library for management of Annotated Research Contexts (ARCs) using an in-memory representation and runtimer agnostic contract systems.
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Home-page: https://github.com/nfdi4plants/ARCtrl
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set_property("types", definitions, this.contents)
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return record_type("ARCtrl.CWL.SoftwarePackage", [], SoftwarePackage, lambda: [("Package", string_type), ("Version", option_type(array_type(string_type))), ("Specs", option_type(array_type(string_type)))])
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Specs: Array[str] | None
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__all__ = ["FileInstance_reflection", "DirectoryInstance_reflection", "DirentInstance_reflection", "CWLType_reflection", "InputRecordSchema_reflection", "InputEnumSchema_reflection", "InputArraySchema_reflection", "SchemaDefRequirementType_reflection", "SoftwarePackage_reflection"]
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output: CWLOutput = CWLOutput(key, (((Decode_cwlTypeStringMatcher(head(value.fields[0]).fields[0].Value, get)[0] if is_empty(tail(value.fields[0])) else Decode_cwlTypeDecoder(value)[0]) if (head(value.fields[0]).tag == 1) else Decode_cwlTypeDecoder(value)[0]) if (not is_empty(value.fields[0])) else Decode_cwlTypeDecoder(value)[0]) if (value.tag == 3) else Decode_cwlTypeDecoder(value)[0])
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return object(getter, value_2)
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Decode_outputArrayDecoder: Callable[[YAMLElement], Array[CWLOutput]] =
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return object_arg.Field("outputs", Decode_outputArrayDecoder)
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Decode_outputsDecoder: Callable[[YAMLElement], Array[CWLOutput]] =
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def Decode_dockerRequirementDecoder(get: IGetters) -> DockerRequirement:
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def
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return object_arg.Field("dockerPull", string)
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def arg_3(value_1: YAMLElement) -> Any:
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def key_decoder(x: str, value_1: Any=value_1) -> str:
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def
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def _arrow537(value_2: YAMLElement, value_1: Any=value_1) -> str:
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return map_1(key_decoder,
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return map_1(key_decoder, _arrow537, value_1)
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return object_arg_1.Field("dockerFile", arg_3)
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def
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def _arrow539(__unit: None=None, get: Any=get) -> str | None:
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object_arg_2: IOptionalGetter = get.Optional
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return object_arg_2.Field("dockerImageId", string)
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return DockerRequirement(
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return DockerRequirement(_arrow536(), _arrow538(), _arrow539())
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def Decode_envVarRequirementDecoder(get: IGetters) -> Array[EnvironmentDef]:
|
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@@ -416,15 +416,15 @@ def Decode_envVarRequirementDecoder(get: IGetters) -> Array[EnvironmentDef]:
|
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def arg_1(value_3: YAMLElement, get: Any=get) -> Array[EnvironmentDef]:
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def decoder(value_2: YAMLElement, value_3: Any=value_3) -> EnvironmentDef:
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def getter(get2: IGetters, value_2: Any=value_2) -> EnvironmentDef:
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def
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def _arrow540(__unit: None=None, get2: Any=get2) -> str:
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object_arg_1: IRequiredGetter = get2.Required
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return object_arg_1.Field("envName", string)
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def
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def _arrow541(__unit: None=None, get2: Any=get2) -> str:
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return object_arg_2.Field("envValue", string)
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return EnvironmentDef(
|
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+
return EnvironmentDef(_arrow540(), _arrow541())
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return object(getter, value_2)
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|
|
@@ -438,31 +438,31 @@ def Decode_softwareRequirementDecoder(get: IGetters) -> Array[SoftwarePackage]:
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def arg_1(value_6: YAMLElement, get: Any=get) -> Array[SoftwarePackage]:
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def decoder(value_5: YAMLElement, value_6: Any=value_6) -> SoftwarePackage:
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def
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def _arrow542(__unit: None=None, get2: Any=get2) -> str:
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return object_arg_1.Field("package", string)
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def
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+
def _arrow544(__unit: None=None, get2: Any=get2) -> Array[str] | None:
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def arg_5(value_1: YAMLElement) -> Array[str]:
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def
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+
def _arrow543(value_2: YAMLElement, value_1: Any=value_1) -> str:
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return string(value_2)
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|
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|
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return resizearray(
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|
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|
+
return resizearray(_arrow543, value_1)
|
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|
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|
return object_arg_2.Field("version", arg_5)
|
|
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|
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|
-
def
|
|
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|
+
def _arrow547(__unit: None=None, get2: Any=get2) -> Array[str] | None:
|
|
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|
object_arg_3: IOptionalGetter = get2.Optional
|
|
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|
def arg_7(value_3: YAMLElement) -> Array[str]:
|
|
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|
-
def
|
|
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|
+
def _arrow546(value_4: YAMLElement, value_3: Any=value_3) -> str:
|
|
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|
return string(value_4)
|
|
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|
|
|
461
|
-
return resizearray(
|
|
461
|
+
return resizearray(_arrow546, value_3)
|
|
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462
|
|
|
463
463
|
return object_arg_3.Field("specs", arg_7)
|
|
464
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|
|
|
465
|
-
return SoftwarePackage(
|
|
465
|
+
return SoftwarePackage(_arrow542(), _arrow544(), _arrow547())
|
|
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|
|
|
467
467
|
return object(getter, value_5)
|
|
468
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|
|
|
@@ -480,86 +480,86 @@ def Decode_initialWorkDirRequirementDecoder(get: IGetters) -> Array[CWLType]:
|
|
|
480
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|
|
|
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481
|
|
|
482
482
|
def Decode_resourceRequirementDecoder(get: IGetters) -> ResourceRequirementInstance:
|
|
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|
-
def
|
|
483
|
+
def _arrow548(__unit: None=None, get: Any=get) -> YAMLElement | None:
|
|
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484
|
object_arg: IOptionalGetter = get.Optional
|
|
485
485
|
def arg_1(x: YAMLElement) -> YAMLElement:
|
|
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|
return x
|
|
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487
|
|
|
488
488
|
return object_arg.Field("coresMin", arg_1)
|
|
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|
|
|
490
|
-
def
|
|
490
|
+
def _arrow549(__unit: None=None, get: Any=get) -> YAMLElement | None:
|
|
491
491
|
object_arg_1: IOptionalGetter = get.Optional
|
|
492
492
|
def arg_3(x_1: YAMLElement) -> YAMLElement:
|
|
493
493
|
return x_1
|
|
494
494
|
|
|
495
495
|
return object_arg_1.Field("coresMax", arg_3)
|
|
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496
|
|
|
497
|
-
def
|
|
497
|
+
def _arrow550(__unit: None=None, get: Any=get) -> YAMLElement | None:
|
|
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498
|
object_arg_2: IOptionalGetter = get.Optional
|
|
499
499
|
def arg_5(x_2: YAMLElement) -> YAMLElement:
|
|
500
500
|
return x_2
|
|
501
501
|
|
|
502
502
|
return object_arg_2.Field("ramMin", arg_5)
|
|
503
503
|
|
|
504
|
-
def
|
|
504
|
+
def _arrow551(__unit: None=None, get: Any=get) -> YAMLElement | None:
|
|
505
505
|
object_arg_3: IOptionalGetter = get.Optional
|
|
506
506
|
def arg_7(x_3: YAMLElement) -> YAMLElement:
|
|
507
507
|
return x_3
|
|
508
508
|
|
|
509
509
|
return object_arg_3.Field("ramMax", arg_7)
|
|
510
510
|
|
|
511
|
-
def
|
|
511
|
+
def _arrow552(__unit: None=None, get: Any=get) -> YAMLElement | None:
|
|
512
512
|
object_arg_4: IOptionalGetter = get.Optional
|
|
513
513
|
def arg_9(x_4: YAMLElement) -> YAMLElement:
|
|
514
514
|
return x_4
|
|
515
515
|
|
|
516
516
|
return object_arg_4.Field("tmpdirMin", arg_9)
|
|
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517
|
|
|
518
|
-
def
|
|
518
|
+
def _arrow553(__unit: None=None, get: Any=get) -> YAMLElement | None:
|
|
519
519
|
object_arg_5: IOptionalGetter = get.Optional
|
|
520
520
|
def arg_11(x_5: YAMLElement) -> YAMLElement:
|
|
521
521
|
return x_5
|
|
522
522
|
|
|
523
523
|
return object_arg_5.Field("tmpdirMax", arg_11)
|
|
524
524
|
|
|
525
|
-
def
|
|
525
|
+
def _arrow554(__unit: None=None, get: Any=get) -> YAMLElement | None:
|
|
526
526
|
object_arg_6: IOptionalGetter = get.Optional
|
|
527
527
|
def arg_13(x_6: YAMLElement) -> YAMLElement:
|
|
528
528
|
return x_6
|
|
529
529
|
|
|
530
530
|
return object_arg_6.Field("outdirMin", arg_13)
|
|
531
531
|
|
|
532
|
-
def
|
|
532
|
+
def _arrow555(__unit: None=None, get: Any=get) -> YAMLElement | None:
|
|
533
533
|
object_arg_7: IOptionalGetter = get.Optional
|
|
534
534
|
def arg_15(x_7: YAMLElement) -> YAMLElement:
|
|
535
535
|
return x_7
|
|
536
536
|
|
|
537
537
|
return object_arg_7.Field("outdirMax", arg_15)
|
|
538
538
|
|
|
539
|
-
return ResourceRequirementInstance__ctor_D76FC00(some(
|
|
539
|
+
return ResourceRequirementInstance__ctor_D76FC00(some(_arrow548()), some(_arrow549()), some(_arrow550()), some(_arrow551()), some(_arrow552()), some(_arrow553()), some(_arrow554()), some(_arrow555()))
|
|
540
540
|
|
|
541
541
|
|
|
542
542
|
def Decode_schemaDefRequirementDecoder(get: IGetters) -> Array[SchemaDefRequirementType]:
|
|
543
543
|
def f(m: Any, get: Any=get) -> SchemaDefRequirementType:
|
|
544
544
|
return SchemaDefRequirementType__ctor_541DA560(item(0, FSharpMap__get_Keys(m)), item(0, FSharpMap__get_Values(m)))
|
|
545
545
|
|
|
546
|
-
def
|
|
546
|
+
def _arrow557(__unit: None=None, get: Any=get) -> Array[Any]:
|
|
547
547
|
object_arg: IRequiredGetter = get.Required
|
|
548
548
|
def arg_1(value_2: YAMLElement) -> Array[Any]:
|
|
549
549
|
def decoder(value: YAMLElement, value_2: Any=value_2) -> Any:
|
|
550
550
|
def key_decoder(x: str, value: Any=value) -> str:
|
|
551
551
|
return x
|
|
552
552
|
|
|
553
|
-
def
|
|
553
|
+
def _arrow556(value_1: YAMLElement, value: Any=value) -> str:
|
|
554
554
|
return string(value_1)
|
|
555
555
|
|
|
556
|
-
return map_1(key_decoder,
|
|
556
|
+
return map_1(key_decoder, _arrow556, value)
|
|
557
557
|
|
|
558
558
|
return resizearray(decoder, value_2)
|
|
559
559
|
|
|
560
560
|
return object_arg.Field("types", arg_1)
|
|
561
561
|
|
|
562
|
-
return ResizeArray_map(f,
|
|
562
|
+
return ResizeArray_map(f, _arrow557())
|
|
563
563
|
|
|
564
564
|
|
|
565
565
|
def Decode_toolTimeLimitRequirementDecoder(get: IGetters) -> float:
|
|
@@ -570,7 +570,7 @@ def Decode_toolTimeLimitRequirementDecoder(get: IGetters) -> float:
|
|
|
570
570
|
return object_arg.Field("timelimit", arg_1)
|
|
571
571
|
|
|
572
572
|
|
|
573
|
-
def
|
|
573
|
+
def _arrow558(value_2: YAMLElement) -> Array[Requirement]:
|
|
574
574
|
def decoder(value_1: YAMLElement) -> Requirement:
|
|
575
575
|
def getter(get: IGetters, value_1: Any=value_1) -> Requirement:
|
|
576
576
|
cls: str
|
|
@@ -636,9 +636,9 @@ def _arrow560(value_2: YAMLElement) -> Array[Requirement]:
|
|
|
636
636
|
return resizearray(decoder, value_2)
|
|
637
637
|
|
|
638
638
|
|
|
639
|
-
Decode_requirementArrayDecoder: Callable[[YAMLElement], Array[Requirement]] =
|
|
639
|
+
Decode_requirementArrayDecoder: Callable[[YAMLElement], Array[Requirement]] = _arrow558
|
|
640
640
|
|
|
641
|
-
def
|
|
641
|
+
def _arrow559(value: YAMLElement) -> Array[Requirement] | None:
|
|
642
642
|
def getter(get: IGetters) -> Array[Requirement] | None:
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object_arg: IOptionalGetter = get.Optional
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return object_arg.Field("requirements", Decode_requirementArrayDecoder)
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@@ -646,9 +646,9 @@ def _arrow561(value: YAMLElement) -> Array[Requirement] | None:
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return object(getter, value)
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-
Decode_requirementsDecoder: Callable[[YAMLElement], Array[Requirement] | None] =
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+
Decode_requirementsDecoder: Callable[[YAMLElement], Array[Requirement] | None] = _arrow559
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def
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+
def _arrow560(value: YAMLElement) -> Array[Requirement] | None:
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def getter(get: IGetters) -> Array[Requirement] | None:
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object_arg: IOptionalGetter = get.Optional
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return object_arg.Field("hints", Decode_requirementArrayDecoder)
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@@ -656,14 +656,14 @@ def _arrow562(value: YAMLElement) -> Array[Requirement] | None:
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return object(getter, value)
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-
Decode_hintsDecoder: Callable[[YAMLElement], Array[Requirement] | None] =
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+
Decode_hintsDecoder: Callable[[YAMLElement], Array[Requirement] | None] = _arrow560
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def _arrow567(value_5: YAMLElement) -> InputBinding | None:
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def getter_1(get: IGetters) -> InputBinding | None:
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object_arg: IOptionalGetter = get.Optional
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def arg_1(value_4: YAMLElement, get: Any=get) -> InputBinding:
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def getter(get_0027: IGetters, value_4: Any=value_4) -> InputBinding:
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def
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+
def _arrow561(__unit: None=None, get_0027: Any=get_0027) -> str | None:
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object_arg_1: IOptionalGetter = get_0027.Optional
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return object_arg_1.Field("prefix", string)
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@@ -679,7 +679,7 @@ def _arrow567(value_5: YAMLElement) -> InputBinding | None:
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object_arg_4: IOptionalGetter = get_0027.Optional
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return object_arg_4.Field("separate", bool_1)
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return InputBinding(
|
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+
return InputBinding(_arrow561(), _arrow564(), _arrow565(), _arrow566())
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return object(getter, value_4)
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@@ -31,15 +31,15 @@ def hash_1(obj: Any | None=None) -> int:
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def box_hash_option(a: Any | None=None) -> Any:
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def
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+
def _arrow562(__unit: None=None, a: Any=a) -> int:
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copy_of_struct: _A = value_1(a)
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return identity_hash(copy_of_struct)
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def
|
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+
def _arrow563(__unit: None=None, a: Any=a) -> int:
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copy_of_struct_1: int = 0
|
|
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|
return number_hash(copy_of_struct_1)
|
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|
42
|
-
return
|
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|
+
return _arrow562() if (a is not None) else _arrow563()
|
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|
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45
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|
def box_hash_array(a: Array[Any]) -> Any:
|
|
@@ -23,11 +23,11 @@ def check_valid_characters(identifier: str) -> None:
|
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|
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25
|
def create_missing_identifier(__unit: None=None) -> str:
|
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|
-
def
|
|
26
|
+
def _arrow545(__unit: None=None) -> str:
|
|
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|
copy_of_struct: str = new_guid()
|
|
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|
return str(copy_of_struct)
|
|
29
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|
|
|
30
|
-
return "MISSING_IDENTIFIER_" +
|
|
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|
+
return "MISSING_IDENTIFIER_" + _arrow545()
|
|
31
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|
32
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|
|
|
33
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|
def is_missing_identifier(str_1: str) -> bool:
|
|
@@ -13,7 +13,7 @@ from ..Helper.regex import ActivePatterns__007CRegex_007C__007C
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|
13
13
|
from ..ontology_annotation import (OntologyAnnotation, OntologyAnnotation_reflection)
|
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14
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|
from ..value import (Value, Value_reflection)
|
|
15
15
|
|
|
16
|
-
def
|
|
16
|
+
def _expr660() -> TypeInfo:
|
|
17
17
|
return record_type("ARCtrl.Process.Component", [], Component, lambda: [("ComponentValue", option_type(Value_reflection())), ("ComponentUnit", option_type(OntologyAnnotation_reflection())), ("ComponentType", option_type(OntologyAnnotation_reflection()))])
|
|
18
18
|
|
|
19
19
|
|
|
@@ -48,7 +48,7 @@ class Component(Record):
|
|
|
48
48
|
return this.ComponentUnit
|
|
49
49
|
|
|
50
50
|
|
|
51
|
-
Component_reflection =
|
|
51
|
+
Component_reflection = _expr660
|
|
52
52
|
|
|
53
53
|
def Component__get_ComponentName(this: Component) -> str | None:
|
|
54
54
|
def mapping(v: Value, this: Any=this) -> str:
|
|
@@ -9,7 +9,7 @@ from ..comment import Comment
|
|
|
9
9
|
from ..Helper.collections_ import Option_fromValueWithDefault
|
|
10
10
|
from ..ontology_annotation import (OntologyAnnotation, OntologyAnnotation_reflection)
|
|
11
11
|
|
|
12
|
-
def
|
|
12
|
+
def _expr659() -> TypeInfo:
|
|
13
13
|
return record_type("ARCtrl.Process.ProtocolParameter", [], ProtocolParameter, lambda: [("ID", option_type(string_type)), ("ParameterName", option_type(OntologyAnnotation_reflection()))])
|
|
14
14
|
|
|
15
15
|
|
|
@@ -92,7 +92,7 @@ class ProtocolParameter(Record):
|
|
|
92
92
|
return "OA " + this.NameText
|
|
93
93
|
|
|
94
94
|
|
|
95
|
-
ProtocolParameter_reflection =
|
|
95
|
+
ProtocolParameter_reflection = _expr659
|
|
96
96
|
|
|
97
97
|
__all__ = ["ProtocolParameter_reflection"]
|
|
98
98
|
|
|
@@ -9,7 +9,7 @@ from ..ontology_annotation import OntologyAnnotation
|
|
|
9
9
|
from .composite_cell import (CompositeCell, CompositeCell_reflection)
|
|
10
10
|
from .composite_header import (CompositeHeader, CompositeHeader_reflection)
|
|
11
11
|
|
|
12
|
-
def
|
|
12
|
+
def _expr716() -> TypeInfo:
|
|
13
13
|
return record_type("ARCtrl.CompositeColumn", [], CompositeColumn, lambda: [("Header", CompositeHeader_reflection()), ("Cells", array_type(CompositeCell_reflection()))])
|
|
14
14
|
|
|
15
15
|
|
|
@@ -30,13 +30,13 @@ class CompositeColumn(Record):
|
|
|
30
30
|
|
|
31
31
|
def TryGetColumnUnits(self, __unit: None=None) -> Array[OntologyAnnotation] | None:
|
|
32
32
|
this: CompositeColumn = self
|
|
33
|
-
def
|
|
34
|
-
def
|
|
33
|
+
def _arrow715(__unit: None=None) -> IEnumerable_1[OntologyAnnotation]:
|
|
34
|
+
def _arrow714(cell: CompositeCell) -> IEnumerable_1[OntologyAnnotation]:
|
|
35
35
|
return singleton(cell.AsUnitized[1]) if cell.is_unitized else empty()
|
|
36
36
|
|
|
37
|
-
return collect(
|
|
37
|
+
return collect(_arrow714, this.Cells)
|
|
38
38
|
|
|
39
|
-
arr: Array[OntologyAnnotation] = to_array(delay(
|
|
39
|
+
arr: Array[OntologyAnnotation] = to_array(delay(_arrow715))
|
|
40
40
|
return None if (len(arr) == 0) else arr
|
|
41
41
|
|
|
42
42
|
def GetDefaultEmptyCell(self, __unit: None=None) -> CompositeCell:
|
|
@@ -67,7 +67,7 @@ class CompositeColumn(Record):
|
|
|
67
67
|
return this.Header.IsUnique
|
|
68
68
|
|
|
69
69
|
|
|
70
|
-
CompositeColumn_reflection =
|
|
70
|
+
CompositeColumn_reflection = _expr716
|
|
71
71
|
|
|
72
72
|
__all__ = ["CompositeColumn_reflection"]
|
|
73
73
|
|
|
@@ -11,7 +11,7 @@ from ..ontology_annotation import (OntologyAnnotation, OntologyAnnotation_reflec
|
|
|
11
11
|
|
|
12
12
|
__A = TypeVar("__A")
|
|
13
13
|
|
|
14
|
-
def
|
|
14
|
+
def _expr713() -> TypeInfo:
|
|
15
15
|
return union_type("ARCtrl.IOType", [], IOType, lambda: [[], [], [], [], [("Item", string_type)]])
|
|
16
16
|
|
|
17
17
|
|
|
@@ -40,11 +40,11 @@ class IOType(Union):
|
|
|
40
40
|
def as_input(self, __unit: None=None) -> str:
|
|
41
41
|
this: IOType = self
|
|
42
42
|
def string_create(x: Any | None=None) -> str:
|
|
43
|
-
def
|
|
43
|
+
def _arrow711(__unit: None=None, x: Any=x) -> str:
|
|
44
44
|
copy_of_struct: __A = x
|
|
45
45
|
return to_string(copy_of_struct)
|
|
46
46
|
|
|
47
|
-
return ("Input [" +
|
|
47
|
+
return ("Input [" + _arrow711()) + "]"
|
|
48
48
|
|
|
49
49
|
return string_create(this.fields[0]) if (this.tag == 4) else string_create(this)
|
|
50
50
|
|
|
@@ -52,11 +52,11 @@ class IOType(Union):
|
|
|
52
52
|
def as_output(self, __unit: None=None) -> str:
|
|
53
53
|
this: IOType = self
|
|
54
54
|
def string_create(x: Any | None=None) -> str:
|
|
55
|
-
def
|
|
55
|
+
def _arrow712(__unit: None=None, x: Any=x) -> str:
|
|
56
56
|
copy_of_struct: __A = x
|
|
57
57
|
return to_string(copy_of_struct)
|
|
58
58
|
|
|
59
|
-
return ("Output [" +
|
|
59
|
+
return ("Output [" + _arrow712()) + "]"
|
|
60
60
|
|
|
61
61
|
return string_create(this.fields[0]) if (this.tag == 4) else string_create(this)
|
|
62
62
|
|
|
@@ -161,7 +161,7 @@ class IOType(Union):
|
|
|
161
161
|
return IOType(4, s)
|
|
162
162
|
|
|
163
163
|
|
|
164
|
-
IOType_reflection =
|
|
164
|
+
IOType_reflection = _expr713
|
|
165
165
|
|
|
166
166
|
def _expr717() -> TypeInfo:
|
|
167
167
|
return union_type("ARCtrl.CompositeHeader", [], CompositeHeader, lambda: [[("Item", OntologyAnnotation_reflection())], [("Item", OntologyAnnotation_reflection())], [("Item", OntologyAnnotation_reflection())], [("Item", OntologyAnnotation_reflection())], [], [], [], [], [], [], [], [("Item", IOType_reflection())], [("Item", IOType_reflection())], [("Item", string_type)], [("Item", string_type)]])
|