ARCtrl 2.2.1__tar.gz → 2.2.2__tar.gz

{arctrl-2.2.1 → arctrl-2.2.2}/PKG-INFO

@@ -1,6 +1,6 @@
 Metadata-Version: 2.1
 Name: ARCtrl
-Version: 2.2.1
+Version: 2.2.2
 Summary: Library for management of Annotated Research Contexts (ARCs) using an in-memory representation and runtimer agnostic contract systems.
 Home-page: https://github.com/nfdi4plants/ARCtrl
 Keywords: arc,annotated research context,isa,research data,multi platform

{arctrl-2.2.1 → arctrl-2.2.2}/arctrl/CWL/cwltypes.py

@@ -6,7 +6,7 @@ from ..fable_modules.dynamic_obj.dyn_obj import set_property
 from ..fable_modules.fable_library.reflection import (TypeInfo, class_type, string_type, option_type, bool_type, record_type, union_type, array_type)
 from ..fable_modules.fable_library.types import (Record, Array, Union, FSharpRef)
 
-def _expr447() -> TypeInfo:
+def _expr431() -> TypeInfo:
     return class_type("ARCtrl.CWL.FileInstance", None, FileInstance, DynamicObj_reflection())
 
 
@@ -16,13 +16,13 @@ class FileInstance(DynamicObj):
         pass
 
 
-FileInstance_reflection = _expr447
+FileInstance_reflection = _expr431
 
 def FileInstance__ctor(__unit: None=None) -> FileInstance:
     return FileInstance(__unit)
 
 
-def _expr449() -> TypeInfo:
+def _expr433() -> TypeInfo:
     return class_type("ARCtrl.CWL.DirectoryInstance", None, DirectoryInstance, DynamicObj_reflection())
 
 
@@ -32,13 +32,13 @@ class DirectoryInstance(DynamicObj):
         pass
 
 
-DirectoryInstance_reflection = _expr449
+DirectoryInstance_reflection = _expr433
 
 def DirectoryInstance__ctor(__unit: None=None) -> DirectoryInstance:
     return DirectoryInstance(__unit)
 
 
-def _expr452() -> TypeInfo:
+def _expr434() -> TypeInfo:
     return record_type("ARCtrl.CWL.DirentInstance", [], DirentInstance, lambda: [("Entry", string_type), ("Entryname", option_type(string_type)), ("Writable", option_type(bool_type))])
 
 
@@ -48,9 +48,9 @@ class DirentInstance(Record):
     Entryname: str | None
     Writable: bool | None
 
-DirentInstance_reflection = _expr452
+DirentInstance_reflection = _expr434
 
-def _expr458() -> TypeInfo:
+def _expr435() -> TypeInfo:
     return union_type("ARCtrl.CWL.CWLType", [], CWLType, lambda: [[("Item", FileInstance_reflection())], [("Item", DirectoryInstance_reflection())], [("Item", DirentInstance_reflection())], [], [], [], [], [], [], [], [], [("Item", CWLType_reflection())]])
 
 
@@ -65,9 +65,9 @@ class CWLType(Union):
         return ["File", "Directory", "Dirent", "String", "Int", "Long", "Float", "Double", "Boolean", "Stdout", "Null", "Array"]
 
 
-CWLType_reflection = _expr458
+CWLType_reflection = _expr435
 
-def _expr460() -> TypeInfo:
+def _expr438() -> TypeInfo:
     return class_type("ARCtrl.CWL.InputRecordSchema", None, InputRecordSchema, DynamicObj_reflection())
 
 
@@ -77,13 +77,13 @@ class InputRecordSchema(DynamicObj):
         pass
 
 
-InputRecordSchema_reflection = _expr460
+InputRecordSchema_reflection = _expr438
 
 def InputRecordSchema__ctor(__unit: None=None) -> InputRecordSchema:
     return InputRecordSchema(__unit)
 
 
-def _expr461() -> TypeInfo:
+def _expr441() -> TypeInfo:
     return class_type("ARCtrl.CWL.InputEnumSchema", None, InputEnumSchema, DynamicObj_reflection())
 
 
@@ -93,13 +93,13 @@ class InputEnumSchema(DynamicObj):
         pass
 
 
-InputEnumSchema_reflection = _expr461
+InputEnumSchema_reflection = _expr441
 
 def InputEnumSchema__ctor(__unit: None=None) -> InputEnumSchema:
     return InputEnumSchema(__unit)
 
 
-def _expr462() -> TypeInfo:
+def _expr445() -> TypeInfo:
     return class_type("ARCtrl.CWL.InputArraySchema", None, InputArraySchema, DynamicObj_reflection())
 
 
@@ -109,13 +109,13 @@ class InputArraySchema(DynamicObj):
         pass
 
 
-InputArraySchema_reflection = _expr462
+InputArraySchema_reflection = _expr445
 
 def InputArraySchema__ctor(__unit: None=None) -> InputArraySchema:
     return InputArraySchema(__unit)
 
 
-def _expr463() -> TypeInfo:
+def _expr446() -> TypeInfo:
     return class_type("ARCtrl.CWL.SchemaDefRequirementType", None, SchemaDefRequirementType, DynamicObj_reflection())
 
 
@@ -128,13 +128,13 @@ class SchemaDefRequirementType(DynamicObj):
         set_property("types", definitions, this.contents)
 
 
-SchemaDefRequirementType_reflection = _expr463
+SchemaDefRequirementType_reflection = _expr446
 
 def SchemaDefRequirementType__ctor_541DA560(types: Any=None, definitions: Any=None) -> SchemaDefRequirementType:
     return SchemaDefRequirementType(types, definitions)
 
 
-def _expr464() -> TypeInfo:
+def _expr448() -> TypeInfo:
     return record_type("ARCtrl.CWL.SoftwarePackage", [], SoftwarePackage, lambda: [("Package", string_type), ("Version", option_type(array_type(string_type))), ("Specs", option_type(array_type(string_type)))])
 
 
@@ -144,7 +144,7 @@ class SoftwarePackage(Record):
     Version: Array[str] | None
     Specs: Array[str] | None
 
-SoftwarePackage_reflection = _expr464
+SoftwarePackage_reflection = _expr448
 
 __all__ = ["FileInstance_reflection", "DirectoryInstance_reflection", "DirentInstance_reflection", "CWLType_reflection", "InputRecordSchema_reflection", "InputEnumSchema_reflection", "InputArraySchema_reflection", "SchemaDefRequirementType_reflection", "SoftwarePackage_reflection"]
 

{arctrl-2.2.1 → arctrl-2.2.2}/arctrl/Core/Helper/hash_codes.py

@@ -31,15 +31,15 @@ def hash_1(obj: Any | None=None) -> int:
 
 
 def box_hash_option(a: Any | None=None) -> Any:
-    def _arrow529(__unit: None=None, a: Any=a) -> int:
+    def _arrow528(__unit: None=None, a: Any=a) -> int:
         copy_of_struct: _A = value_1(a)
         return identity_hash(copy_of_struct)
 
-    def _arrow530(__unit: None=None, a: Any=a) -> int:
+    def _arrow529(__unit: None=None, a: Any=a) -> int:
         copy_of_struct_1: int = 0
         return number_hash(copy_of_struct_1)
 
-    return _arrow529() if (a is not None) else _arrow530()
+    return _arrow528() if (a is not None) else _arrow529()
 
 
 def box_hash_array(a: Array[Any]) -> Any:

{arctrl-2.2.1 → arctrl-2.2.2}/arctrl/Core/Helper/identifier.py

@@ -23,11 +23,11 @@ def check_valid_characters(identifier: str) -> None:
 
 
 def create_missing_identifier(__unit: None=None) -> str:
-    def _arrow528(__unit: None=None) -> str:
+    def _arrow530(__unit: None=None) -> str:
         copy_of_struct: str = new_guid()
         return str(copy_of_struct)
 
-    return "MISSING_IDENTIFIER_" + _arrow528()
+    return "MISSING_IDENTIFIER_" + _arrow530()
 
 
 def is_missing_identifier(str_1: str) -> bool:

{arctrl-2.2.1 → arctrl-2.2.2}/arctrl/Core/Process/component.py

@@ -13,7 +13,7 @@ from ..Helper.regex import ActivePatterns__007CRegex_007C__007C
 from ..ontology_annotation import (OntologyAnnotation, OntologyAnnotation_reflection)
 from ..value import (Value, Value_reflection)
 
-def _expr660() -> TypeInfo:
+def _expr659() -> TypeInfo:
     return record_type("ARCtrl.Process.Component", [], Component, lambda: [("ComponentValue", option_type(Value_reflection())), ("ComponentUnit", option_type(OntologyAnnotation_reflection())), ("ComponentType", option_type(OntologyAnnotation_reflection()))])
 
 
@@ -48,7 +48,7 @@ class Component(Record):
         return this.ComponentUnit
 
 
-Component_reflection = _expr660
+Component_reflection = _expr659
 
 def Component__get_ComponentName(this: Component) -> str | None:
     def mapping(v: Value, this: Any=this) -> str:

{arctrl-2.2.1 → arctrl-2.2.2}/arctrl/Core/Process/protocol_parameter.py

@@ -9,7 +9,7 @@ from ..comment import Comment
 from ..Helper.collections_ import Option_fromValueWithDefault
 from ..ontology_annotation import (OntologyAnnotation, OntologyAnnotation_reflection)
 
-def _expr659() -> TypeInfo:
+def _expr660() -> TypeInfo:
     return record_type("ARCtrl.Process.ProtocolParameter", [], ProtocolParameter, lambda: [("ID", option_type(string_type)), ("ParameterName", option_type(OntologyAnnotation_reflection()))])
 
 
@@ -92,7 +92,7 @@ class ProtocolParameter(Record):
         return "OA " + this.NameText
 
 
-ProtocolParameter_reflection = _expr659
+ProtocolParameter_reflection = _expr660
 
 __all__ = ["ProtocolParameter_reflection"]
 

{arctrl-2.2.1 → arctrl-2.2.2}/arctrl/Core/Table/composite_column.py

@@ -9,7 +9,7 @@ from ..ontology_annotation import OntologyAnnotation
 from .composite_cell import (CompositeCell, CompositeCell_reflection)
 from .composite_header import (CompositeHeader, CompositeHeader_reflection)
 
-def _expr716() -> TypeInfo:
+def _expr714() -> TypeInfo:
     return record_type("ARCtrl.CompositeColumn", [], CompositeColumn, lambda: [("Header", CompositeHeader_reflection()), ("Cells", array_type(CompositeCell_reflection()))])
 
 
@@ -30,13 +30,13 @@ class CompositeColumn(Record):
 
     def TryGetColumnUnits(self, __unit: None=None) -> Array[OntologyAnnotation] | None:
         this: CompositeColumn = self
-        def _arrow715(__unit: None=None) -> IEnumerable_1[OntologyAnnotation]:
-            def _arrow714(cell: CompositeCell) -> IEnumerable_1[OntologyAnnotation]:
+        def _arrow712(__unit: None=None) -> IEnumerable_1[OntologyAnnotation]:
+            def _arrow711(cell: CompositeCell) -> IEnumerable_1[OntologyAnnotation]:
                 return singleton(cell.AsUnitized[1]) if cell.is_unitized else empty()
 
-            return collect(_arrow714, this.Cells)
+            return collect(_arrow711, this.Cells)
 
-        arr: Array[OntologyAnnotation] = to_array(delay(_arrow715))
+        arr: Array[OntologyAnnotation] = to_array(delay(_arrow712))
         return None if (len(arr) == 0) else arr
 
     def GetDefaultEmptyCell(self, __unit: None=None) -> CompositeCell:
@@ -67,7 +67,7 @@ class CompositeColumn(Record):
         return this.Header.IsUnique
 
 
-CompositeColumn_reflection = _expr716
+CompositeColumn_reflection = _expr714
 
 __all__ = ["CompositeColumn_reflection"]
 

{arctrl-2.2.1 → arctrl-2.2.2}/arctrl/Core/Table/composite_header.py

@@ -11,7 +11,7 @@ from ..ontology_annotation import (OntologyAnnotation, OntologyAnnotation_reflec
 
 __A = TypeVar("__A")
 
-def _expr713() -> TypeInfo:
+def _expr716() -> TypeInfo:
     return union_type("ARCtrl.IOType", [], IOType, lambda: [[], [], [], [], [("Item", string_type)]])
 
 
@@ -40,11 +40,11 @@ class IOType(Union):
     def as_input(self, __unit: None=None) -> str:
         this: IOType = self
         def string_create(x: Any | None=None) -> str:
-            def _arrow711(__unit: None=None, x: Any=x) -> str:
+            def _arrow713(__unit: None=None, x: Any=x) -> str:
                 copy_of_struct: __A = x
                 return to_string(copy_of_struct)
 
-            return ("Input [" + _arrow711()) + "]"
+            return ("Input [" + _arrow713()) + "]"
 
         return string_create(this.fields[0]) if (this.tag == 4) else string_create(this)
 
@@ -52,11 +52,11 @@ class IOType(Union):
     def as_output(self, __unit: None=None) -> str:
         this: IOType = self
         def string_create(x: Any | None=None) -> str:
-            def _arrow712(__unit: None=None, x: Any=x) -> str:
+            def _arrow715(__unit: None=None, x: Any=x) -> str:
                 copy_of_struct: __A = x
                 return to_string(copy_of_struct)
 
-            return ("Output [" + _arrow712()) + "]"
+            return ("Output [" + _arrow715()) + "]"
 
         return string_create(this.fields[0]) if (this.tag == 4) else string_create(this)
 
@@ -161,7 +161,7 @@ class IOType(Union):
         return IOType(4, s)
 
 
-IOType_reflection = _expr713
+IOType_reflection = _expr716
 
 def _expr717() -> TypeInfo:
     return union_type("ARCtrl.CompositeHeader", [], CompositeHeader, lambda: [[("Item", OntologyAnnotation_reflection())], [("Item", OntologyAnnotation_reflection())], [("Item", OntologyAnnotation_reflection())], [("Item", OntologyAnnotation_reflection())], [], [], [], [], [], [], [], [("Item", IOType_reflection())], [("Item", IOType_reflection())], [("Item", string_type)], [("Item", string_type)]])