AOT-biomaps 2.9.381__tar.gz → 2.9.383__tar.gz

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Files changed (53) hide show
  1. {aot_biomaps-2.9.381 → aot_biomaps-2.9.383}/AOT_biomaps/AOT_Acoustic/_mainAcoustic.py +4 -2
  2. {aot_biomaps-2.9.381 → aot_biomaps-2.9.383}/AOT_biomaps/__init__.py +3 -1
  3. {aot_biomaps-2.9.381 → aot_biomaps-2.9.383}/AOT_biomaps.egg-info/PKG-INFO +1 -1
  4. {aot_biomaps-2.9.381 → aot_biomaps-2.9.383}/PKG-INFO +1 -1
  5. {aot_biomaps-2.9.381 → aot_biomaps-2.9.383}/setup.py +3 -1
  6. {aot_biomaps-2.9.381 → aot_biomaps-2.9.383}/AOT_biomaps/AOT_Acoustic/AcousticEnums.py +0 -0
  7. {aot_biomaps-2.9.381 → aot_biomaps-2.9.383}/AOT_biomaps/AOT_Acoustic/AcousticTools.py +0 -0
  8. {aot_biomaps-2.9.381 → aot_biomaps-2.9.383}/AOT_biomaps/AOT_Acoustic/FocusedWave.py +0 -0
  9. {aot_biomaps-2.9.381 → aot_biomaps-2.9.383}/AOT_biomaps/AOT_Acoustic/IrregularWave.py +0 -0
  10. {aot_biomaps-2.9.381 → aot_biomaps-2.9.383}/AOT_biomaps/AOT_Acoustic/PlaneWave.py +0 -0
  11. {aot_biomaps-2.9.381 → aot_biomaps-2.9.383}/AOT_biomaps/AOT_Acoustic/StructuredWave.py +0 -0
  12. {aot_biomaps-2.9.381 → aot_biomaps-2.9.383}/AOT_biomaps/AOT_Acoustic/__init__.py +0 -0
  13. {aot_biomaps-2.9.381 → aot_biomaps-2.9.383}/AOT_biomaps/AOT_Experiment/ExperimentTools.py +0 -0
  14. {aot_biomaps-2.9.381 → aot_biomaps-2.9.383}/AOT_biomaps/AOT_Experiment/Focus.py +0 -0
  15. {aot_biomaps-2.9.381 → aot_biomaps-2.9.383}/AOT_biomaps/AOT_Experiment/Tomography.py +0 -0
  16. {aot_biomaps-2.9.381 → aot_biomaps-2.9.383}/AOT_biomaps/AOT_Experiment/__init__.py +0 -0
  17. {aot_biomaps-2.9.381 → aot_biomaps-2.9.383}/AOT_biomaps/AOT_Experiment/_mainExperiment.py +0 -0
  18. {aot_biomaps-2.9.381 → aot_biomaps-2.9.383}/AOT_biomaps/AOT_Optic/Absorber.py +0 -0
  19. {aot_biomaps-2.9.381 → aot_biomaps-2.9.383}/AOT_biomaps/AOT_Optic/Laser.py +0 -0
  20. {aot_biomaps-2.9.381 → aot_biomaps-2.9.383}/AOT_biomaps/AOT_Optic/OpticEnums.py +0 -0
  21. {aot_biomaps-2.9.381 → aot_biomaps-2.9.383}/AOT_biomaps/AOT_Optic/__init__.py +0 -0
  22. {aot_biomaps-2.9.381 → aot_biomaps-2.9.383}/AOT_biomaps/AOT_Optic/_mainOptic.py +0 -0
  23. {aot_biomaps-2.9.381 → aot_biomaps-2.9.383}/AOT_biomaps/AOT_Recon/AOT_Optimizers/DEPIERRO.py +0 -0
  24. {aot_biomaps-2.9.381 → aot_biomaps-2.9.383}/AOT_biomaps/AOT_Recon/AOT_Optimizers/LS.py +0 -0
  25. {aot_biomaps-2.9.381 → aot_biomaps-2.9.383}/AOT_biomaps/AOT_Recon/AOT_Optimizers/MAPEM.py +0 -0
  26. {aot_biomaps-2.9.381 → aot_biomaps-2.9.383}/AOT_biomaps/AOT_Recon/AOT_Optimizers/MLEM.py +0 -0
  27. {aot_biomaps-2.9.381 → aot_biomaps-2.9.383}/AOT_biomaps/AOT_Recon/AOT_Optimizers/PDHG.py +0 -0
  28. {aot_biomaps-2.9.381 → aot_biomaps-2.9.383}/AOT_biomaps/AOT_Recon/AOT_Optimizers/__init__.py +0 -0
  29. {aot_biomaps-2.9.381 → aot_biomaps-2.9.383}/AOT_biomaps/AOT_Recon/AOT_PotentialFunctions/Huber.py +0 -0
  30. {aot_biomaps-2.9.381 → aot_biomaps-2.9.383}/AOT_biomaps/AOT_Recon/AOT_PotentialFunctions/Quadratic.py +0 -0
  31. {aot_biomaps-2.9.381 → aot_biomaps-2.9.383}/AOT_biomaps/AOT_Recon/AOT_PotentialFunctions/RelativeDifferences.py +0 -0
  32. {aot_biomaps-2.9.381 → aot_biomaps-2.9.383}/AOT_biomaps/AOT_Recon/AOT_PotentialFunctions/__init__.py +0 -0
  33. {aot_biomaps-2.9.381 → aot_biomaps-2.9.383}/AOT_biomaps/AOT_Recon/AOT_SparseSMatrix/SparseSMatrix_CSR.py +0 -0
  34. {aot_biomaps-2.9.381 → aot_biomaps-2.9.383}/AOT_biomaps/AOT_Recon/AOT_SparseSMatrix/SparseSMatrix_SELL.py +0 -0
  35. {aot_biomaps-2.9.381 → aot_biomaps-2.9.383}/AOT_biomaps/AOT_Recon/AOT_SparseSMatrix/__init__.py +0 -0
  36. {aot_biomaps-2.9.381 → aot_biomaps-2.9.383}/AOT_biomaps/AOT_Recon/AOT_biomaps_kernels.cubin +0 -0
  37. {aot_biomaps-2.9.381 → aot_biomaps-2.9.383}/AOT_biomaps/AOT_Recon/AlgebraicRecon.py +0 -0
  38. {aot_biomaps-2.9.381 → aot_biomaps-2.9.383}/AOT_biomaps/AOT_Recon/AnalyticRecon.py +0 -0
  39. {aot_biomaps-2.9.381 → aot_biomaps-2.9.383}/AOT_biomaps/AOT_Recon/BayesianRecon.py +0 -0
  40. {aot_biomaps-2.9.381 → aot_biomaps-2.9.383}/AOT_biomaps/AOT_Recon/DeepLearningRecon.py +0 -0
  41. {aot_biomaps-2.9.381 → aot_biomaps-2.9.383}/AOT_biomaps/AOT_Recon/PrimalDualRecon.py +0 -0
  42. {aot_biomaps-2.9.381 → aot_biomaps-2.9.383}/AOT_biomaps/AOT_Recon/ReconEnums.py +0 -0
  43. {aot_biomaps-2.9.381 → aot_biomaps-2.9.383}/AOT_biomaps/AOT_Recon/ReconTools.py +0 -0
  44. {aot_biomaps-2.9.381 → aot_biomaps-2.9.383}/AOT_biomaps/AOT_Recon/__init__.py +0 -0
  45. {aot_biomaps-2.9.381 → aot_biomaps-2.9.383}/AOT_biomaps/AOT_Recon/_mainRecon.py +0 -0
  46. {aot_biomaps-2.9.381 → aot_biomaps-2.9.383}/AOT_biomaps/Config.py +0 -0
  47. {aot_biomaps-2.9.381 → aot_biomaps-2.9.383}/AOT_biomaps/Settings.py +0 -0
  48. {aot_biomaps-2.9.381 → aot_biomaps-2.9.383}/AOT_biomaps.egg-info/SOURCES.txt +0 -0
  49. {aot_biomaps-2.9.381 → aot_biomaps-2.9.383}/AOT_biomaps.egg-info/dependency_links.txt +0 -0
  50. {aot_biomaps-2.9.381 → aot_biomaps-2.9.383}/AOT_biomaps.egg-info/requires.txt +0 -0
  51. {aot_biomaps-2.9.381 → aot_biomaps-2.9.383}/AOT_biomaps.egg-info/top_level.txt +0 -0
  52. {aot_biomaps-2.9.381 → aot_biomaps-2.9.383}/README.md +0 -0
  53. {aot_biomaps-2.9.381 → aot_biomaps-2.9.383}/setup.cfg +0 -0
{aot_biomaps-2.9.381 → aot_biomaps-2.9.383}/AOT_biomaps/AOT_Acoustic/_mainAcoustic.py RENAMED
@@ -536,8 +536,7 @@ class AcousticField(ABC):
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  Nx_final = int(round((self.params['Xrange'][1] - self.params['Xrange'][0]) / self.params['dx']))
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  Nz_final = int(round((self.params['Zrange'][1] - self.params['Zrange'][0]) / self.params['dx']))
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- # --- 2. Time and space factors ---
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- factorT = int(np.ceil(self.params['f_AQ'] / self.params['f_saving']))
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+ # --- 2. space factors ---
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  factorX = int(np.ceil(self.params['dx'] / dx))
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  factorZ = factorX
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@@ -565,6 +564,9 @@ class AcousticField(ABC):
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  dt = cfl * dx / c_max
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  kgrid.setTime(self.kgrid.Nt, dt)
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+ factorT = int(np.ceil((1/dt) / (self.params['f_saving'])))
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+ print(f"factorT: {factorT}")
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+ print(f"dt: {dt}")
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  source = kSource()
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  source.p_mask = np.zeros((Nx, Nz))
{aot_biomaps-2.9.381 → aot_biomaps-2.9.383}/AOT_biomaps/__init__.py RENAMED
@@ -85,7 +85,7 @@ from .AOT_Recon.AOT_PotentialFunctions.RelativeDifferences import *
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  from .Config import config
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  from .Settings import *
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- __version__ = '2.9.381'
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+ __version__ = '2.9.383'
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  __process__ = config.get_process()
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  def initialize(process=None):
@@ -242,6 +242,8 @@ def initialize(process=None):
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{aot_biomaps-2.9.381 → aot_biomaps-2.9.383}/AOT_biomaps.egg-info/PKG-INFO RENAMED
@@ -1,6 +1,6 @@
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  Metadata-Version: 2.4
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  Name: AOT_biomaps
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- Version: 2.9.381
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+ Version: 2.9.383
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  Summary: Acousto-Optic Tomography
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  Home-page: https://github.com/LucasDuclos/AcoustoOpticTomography
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  Author: Lucas Duclos
{aot_biomaps-2.9.381 → aot_biomaps-2.9.383}/PKG-INFO RENAMED
@@ -1,6 +1,6 @@
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  Metadata-Version: 2.4
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  Name: AOT_biomaps
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- Version: 2.9.381
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+ Version: 2.9.383
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  Summary: Acousto-Optic Tomography
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  Home-page: https://github.com/LucasDuclos/AcoustoOpticTomography
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  Author: Lucas Duclos
{aot_biomaps-2.9.381 → aot_biomaps-2.9.383}/setup.py RENAMED
@@ -2,7 +2,7 @@ from setuptools import setup, find_packages
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  setup(
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  name='AOT_biomaps',
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- version='2.9.381',
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+ version='2.9.383',
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  packages=find_packages(),
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  include_package_data=True,
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@@ -400,6 +400,8 @@ setup(
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{aot_biomaps-2.9.381 → aot_biomaps-2.9.383}/README.md RENAMED
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{aot_biomaps-2.9.381 → aot_biomaps-2.9.383}/setup.cfg RENAMED
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