AOT-biomaps 2.9.375__tar.gz → 2.9.377__tar.gz

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (53) hide show
  1. {aot_biomaps-2.9.375 → aot_biomaps-2.9.377}/AOT_biomaps/AOT_Acoustic/StructuredWave.py +2 -1
  2. {aot_biomaps-2.9.375 → aot_biomaps-2.9.377}/AOT_biomaps/AOT_Acoustic/_mainAcoustic.py +1 -1
  3. {aot_biomaps-2.9.375 → aot_biomaps-2.9.377}/AOT_biomaps/__init__.py +3 -1
  4. {aot_biomaps-2.9.375 → aot_biomaps-2.9.377}/AOT_biomaps.egg-info/PKG-INFO +1 -1
  5. {aot_biomaps-2.9.375 → aot_biomaps-2.9.377}/PKG-INFO +1 -1
  6. {aot_biomaps-2.9.375 → aot_biomaps-2.9.377}/setup.py +3 -1
  7. {aot_biomaps-2.9.375 → aot_biomaps-2.9.377}/AOT_biomaps/AOT_Acoustic/AcousticEnums.py +0 -0
  8. {aot_biomaps-2.9.375 → aot_biomaps-2.9.377}/AOT_biomaps/AOT_Acoustic/AcousticTools.py +0 -0
  9. {aot_biomaps-2.9.375 → aot_biomaps-2.9.377}/AOT_biomaps/AOT_Acoustic/FocusedWave.py +0 -0
  10. {aot_biomaps-2.9.375 → aot_biomaps-2.9.377}/AOT_biomaps/AOT_Acoustic/IrregularWave.py +0 -0
  11. {aot_biomaps-2.9.375 → aot_biomaps-2.9.377}/AOT_biomaps/AOT_Acoustic/PlaneWave.py +0 -0
  12. {aot_biomaps-2.9.375 → aot_biomaps-2.9.377}/AOT_biomaps/AOT_Acoustic/__init__.py +0 -0
  13. {aot_biomaps-2.9.375 → aot_biomaps-2.9.377}/AOT_biomaps/AOT_Experiment/ExperimentTools.py +0 -0
  14. {aot_biomaps-2.9.375 → aot_biomaps-2.9.377}/AOT_biomaps/AOT_Experiment/Focus.py +0 -0
  15. {aot_biomaps-2.9.375 → aot_biomaps-2.9.377}/AOT_biomaps/AOT_Experiment/Tomography.py +0 -0
  16. {aot_biomaps-2.9.375 → aot_biomaps-2.9.377}/AOT_biomaps/AOT_Experiment/__init__.py +0 -0
  17. {aot_biomaps-2.9.375 → aot_biomaps-2.9.377}/AOT_biomaps/AOT_Experiment/_mainExperiment.py +0 -0
  18. {aot_biomaps-2.9.375 → aot_biomaps-2.9.377}/AOT_biomaps/AOT_Optic/Absorber.py +0 -0
  19. {aot_biomaps-2.9.375 → aot_biomaps-2.9.377}/AOT_biomaps/AOT_Optic/Laser.py +0 -0
  20. {aot_biomaps-2.9.375 → aot_biomaps-2.9.377}/AOT_biomaps/AOT_Optic/OpticEnums.py +0 -0
  21. {aot_biomaps-2.9.375 → aot_biomaps-2.9.377}/AOT_biomaps/AOT_Optic/__init__.py +0 -0
  22. {aot_biomaps-2.9.375 → aot_biomaps-2.9.377}/AOT_biomaps/AOT_Optic/_mainOptic.py +0 -0
  23. {aot_biomaps-2.9.375 → aot_biomaps-2.9.377}/AOT_biomaps/AOT_Recon/AOT_Optimizers/DEPIERRO.py +0 -0
  24. {aot_biomaps-2.9.375 → aot_biomaps-2.9.377}/AOT_biomaps/AOT_Recon/AOT_Optimizers/LS.py +0 -0
  25. {aot_biomaps-2.9.375 → aot_biomaps-2.9.377}/AOT_biomaps/AOT_Recon/AOT_Optimizers/MAPEM.py +0 -0
  26. {aot_biomaps-2.9.375 → aot_biomaps-2.9.377}/AOT_biomaps/AOT_Recon/AOT_Optimizers/MLEM.py +0 -0
  27. {aot_biomaps-2.9.375 → aot_biomaps-2.9.377}/AOT_biomaps/AOT_Recon/AOT_Optimizers/PDHG.py +0 -0
  28. {aot_biomaps-2.9.375 → aot_biomaps-2.9.377}/AOT_biomaps/AOT_Recon/AOT_Optimizers/__init__.py +0 -0
  29. {aot_biomaps-2.9.375 → aot_biomaps-2.9.377}/AOT_biomaps/AOT_Recon/AOT_PotentialFunctions/Huber.py +0 -0
  30. {aot_biomaps-2.9.375 → aot_biomaps-2.9.377}/AOT_biomaps/AOT_Recon/AOT_PotentialFunctions/Quadratic.py +0 -0
  31. {aot_biomaps-2.9.375 → aot_biomaps-2.9.377}/AOT_biomaps/AOT_Recon/AOT_PotentialFunctions/RelativeDifferences.py +0 -0
  32. {aot_biomaps-2.9.375 → aot_biomaps-2.9.377}/AOT_biomaps/AOT_Recon/AOT_PotentialFunctions/__init__.py +0 -0
  33. {aot_biomaps-2.9.375 → aot_biomaps-2.9.377}/AOT_biomaps/AOT_Recon/AOT_SparseSMatrix/SparseSMatrix_CSR.py +0 -0
  34. {aot_biomaps-2.9.375 → aot_biomaps-2.9.377}/AOT_biomaps/AOT_Recon/AOT_SparseSMatrix/SparseSMatrix_SELL.py +0 -0
  35. {aot_biomaps-2.9.375 → aot_biomaps-2.9.377}/AOT_biomaps/AOT_Recon/AOT_SparseSMatrix/__init__.py +0 -0
  36. {aot_biomaps-2.9.375 → aot_biomaps-2.9.377}/AOT_biomaps/AOT_Recon/AOT_biomaps_kernels.cubin +0 -0
  37. {aot_biomaps-2.9.375 → aot_biomaps-2.9.377}/AOT_biomaps/AOT_Recon/AlgebraicRecon.py +0 -0
  38. {aot_biomaps-2.9.375 → aot_biomaps-2.9.377}/AOT_biomaps/AOT_Recon/AnalyticRecon.py +0 -0
  39. {aot_biomaps-2.9.375 → aot_biomaps-2.9.377}/AOT_biomaps/AOT_Recon/BayesianRecon.py +0 -0
  40. {aot_biomaps-2.9.375 → aot_biomaps-2.9.377}/AOT_biomaps/AOT_Recon/DeepLearningRecon.py +0 -0
  41. {aot_biomaps-2.9.375 → aot_biomaps-2.9.377}/AOT_biomaps/AOT_Recon/PrimalDualRecon.py +0 -0
  42. {aot_biomaps-2.9.375 → aot_biomaps-2.9.377}/AOT_biomaps/AOT_Recon/ReconEnums.py +0 -0
  43. {aot_biomaps-2.9.375 → aot_biomaps-2.9.377}/AOT_biomaps/AOT_Recon/ReconTools.py +0 -0
  44. {aot_biomaps-2.9.375 → aot_biomaps-2.9.377}/AOT_biomaps/AOT_Recon/__init__.py +0 -0
  45. {aot_biomaps-2.9.375 → aot_biomaps-2.9.377}/AOT_biomaps/AOT_Recon/_mainRecon.py +0 -0
  46. {aot_biomaps-2.9.375 → aot_biomaps-2.9.377}/AOT_biomaps/Config.py +0 -0
  47. {aot_biomaps-2.9.375 → aot_biomaps-2.9.377}/AOT_biomaps/Settings.py +0 -0
  48. {aot_biomaps-2.9.375 → aot_biomaps-2.9.377}/AOT_biomaps.egg-info/SOURCES.txt +0 -0
  49. {aot_biomaps-2.9.375 → aot_biomaps-2.9.377}/AOT_biomaps.egg-info/dependency_links.txt +0 -0
  50. {aot_biomaps-2.9.375 → aot_biomaps-2.9.377}/AOT_biomaps.egg-info/requires.txt +0 -0
  51. {aot_biomaps-2.9.375 → aot_biomaps-2.9.377}/AOT_biomaps.egg-info/top_level.txt +0 -0
  52. {aot_biomaps-2.9.375 → aot_biomaps-2.9.377}/README.md +0 -0
  53. {aot_biomaps-2.9.375 → aot_biomaps-2.9.377}/setup.cfg +0 -0
{aot_biomaps-2.9.375 → aot_biomaps-2.9.377}/AOT_biomaps/AOT_Acoustic/StructuredWave.py RENAMED
@@ -109,7 +109,8 @@ class StructuredWave(AcousticField):
109
109
  try:
110
110
  super().__init__(**kwargs)
111
111
  self.waveType = WaveType.StructuredWave
112
- self.kgrid.setTime(int(self.kgrid.Nt*1.5),self.kgrid.dt) # Extend the time grid to allow for delays
112
+ if self.params['Nt'] is None:
113
+ self.kgrid.setTime(int(self.kgrid.Nt*1.5),self.kgrid.dt) # Extend the time grid to allow for delays
113
114
  if space_0 is not None and space_1 is not None and move_head_0_2tail is not None and move_tail_1_2head is not None and angle_deg is not None:
114
115
  self.pattern = self.PatternParams(space_0, space_1, move_head_0_2tail, move_tail_1_2head, self.params['num_elements'] // 4)
115
116
  self.angle = angle_deg
{aot_biomaps-2.9.375 → aot_biomaps-2.9.377}/AOT_biomaps/AOT_Acoustic/_mainAcoustic.py RENAMED
@@ -145,7 +145,7 @@ class AcousticField(ABC):
145
145
  self.medium = None
146
146
 
147
147
  self.waveType = None
148
- self.field = None
148
+ self.field = None
149
149
 
150
150
  def __str__(self):
151
151
  """
{aot_biomaps-2.9.375 → aot_biomaps-2.9.377}/AOT_biomaps/__init__.py RENAMED
@@ -85,7 +85,7 @@ from .AOT_Recon.AOT_PotentialFunctions.RelativeDifferences import *
85
85
  from .Config import config
86
86
  from .Settings import *
87
87
 
88
- __version__ = '2.9.375'
88
+ __version__ = '2.9.377'
89
89
  __process__ = config.get_process()
90
90
 
91
91
  def initialize(process=None):
@@ -236,6 +236,8 @@ def initialize(process=None):
236
236
 
237
237
 
238
238
 
239
+
240
+
239
241
 
240
242
 
241
243
 
{aot_biomaps-2.9.375 → aot_biomaps-2.9.377}/AOT_biomaps.egg-info/PKG-INFO RENAMED
@@ -1,6 +1,6 @@
1
1
  Metadata-Version: 2.4
2
2
  Name: AOT_biomaps
3
- Version: 2.9.375
3
+ Version: 2.9.377
4
4
  Summary: Acousto-Optic Tomography
5
5
  Home-page: https://github.com/LucasDuclos/AcoustoOpticTomography
6
6
  Author: Lucas Duclos
{aot_biomaps-2.9.375 → aot_biomaps-2.9.377}/PKG-INFO RENAMED
@@ -1,6 +1,6 @@
1
1
  Metadata-Version: 2.4
2
2
  Name: AOT_biomaps
3
- Version: 2.9.375
3
+ Version: 2.9.377
4
4
  Summary: Acousto-Optic Tomography
5
5
  Home-page: https://github.com/LucasDuclos/AcoustoOpticTomography
6
6
  Author: Lucas Duclos
{aot_biomaps-2.9.375 → aot_biomaps-2.9.377}/setup.py RENAMED
@@ -2,7 +2,7 @@ from setuptools import setup, find_packages
2
2
 
3
3
  setup(
4
4
  name='AOT_biomaps',
5
- version='2.9.375',
5
+ version='2.9.377',
6
6
  packages=find_packages(),
7
7
  include_package_data=True,
8
8
 
@@ -394,6 +394,8 @@ setup(
394
394
 
395
395
 
396
396
 
397
+
398
+
397
399
 
398
400
 
399
401
 
{aot_biomaps-2.9.375 → aot_biomaps-2.9.377}/README.md RENAMED
File without changes
{aot_biomaps-2.9.375 → aot_biomaps-2.9.377}/setup.cfg RENAMED
File without changes