AOT-biomaps 2.9.374__tar.gz → 2.9.376__tar.gz

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Files changed (53) hide show
  1. {aot_biomaps-2.9.374 → aot_biomaps-2.9.376}/AOT_biomaps/AOT_Acoustic/_mainAcoustic.py +2 -1
  2. {aot_biomaps-2.9.374 → aot_biomaps-2.9.376}/AOT_biomaps/__init__.py +3 -1
  3. {aot_biomaps-2.9.374 → aot_biomaps-2.9.376}/AOT_biomaps.egg-info/PKG-INFO +1 -1
  4. {aot_biomaps-2.9.374 → aot_biomaps-2.9.376}/PKG-INFO +1 -1
  5. {aot_biomaps-2.9.374 → aot_biomaps-2.9.376}/setup.py +3 -1
  6. {aot_biomaps-2.9.374 → aot_biomaps-2.9.376}/AOT_biomaps/AOT_Acoustic/AcousticEnums.py +0 -0
  7. {aot_biomaps-2.9.374 → aot_biomaps-2.9.376}/AOT_biomaps/AOT_Acoustic/AcousticTools.py +0 -0
  8. {aot_biomaps-2.9.374 → aot_biomaps-2.9.376}/AOT_biomaps/AOT_Acoustic/FocusedWave.py +0 -0
  9. {aot_biomaps-2.9.374 → aot_biomaps-2.9.376}/AOT_biomaps/AOT_Acoustic/IrregularWave.py +0 -0
  10. {aot_biomaps-2.9.374 → aot_biomaps-2.9.376}/AOT_biomaps/AOT_Acoustic/PlaneWave.py +0 -0
  11. {aot_biomaps-2.9.374 → aot_biomaps-2.9.376}/AOT_biomaps/AOT_Acoustic/StructuredWave.py +0 -0
  12. {aot_biomaps-2.9.374 → aot_biomaps-2.9.376}/AOT_biomaps/AOT_Acoustic/__init__.py +0 -0
  13. {aot_biomaps-2.9.374 → aot_biomaps-2.9.376}/AOT_biomaps/AOT_Experiment/ExperimentTools.py +0 -0
  14. {aot_biomaps-2.9.374 → aot_biomaps-2.9.376}/AOT_biomaps/AOT_Experiment/Focus.py +0 -0
  15. {aot_biomaps-2.9.374 → aot_biomaps-2.9.376}/AOT_biomaps/AOT_Experiment/Tomography.py +0 -0
  16. {aot_biomaps-2.9.374 → aot_biomaps-2.9.376}/AOT_biomaps/AOT_Experiment/__init__.py +0 -0
  17. {aot_biomaps-2.9.374 → aot_biomaps-2.9.376}/AOT_biomaps/AOT_Experiment/_mainExperiment.py +0 -0
  18. {aot_biomaps-2.9.374 → aot_biomaps-2.9.376}/AOT_biomaps/AOT_Optic/Absorber.py +0 -0
  19. {aot_biomaps-2.9.374 → aot_biomaps-2.9.376}/AOT_biomaps/AOT_Optic/Laser.py +0 -0
  20. {aot_biomaps-2.9.374 → aot_biomaps-2.9.376}/AOT_biomaps/AOT_Optic/OpticEnums.py +0 -0
  21. {aot_biomaps-2.9.374 → aot_biomaps-2.9.376}/AOT_biomaps/AOT_Optic/__init__.py +0 -0
  22. {aot_biomaps-2.9.374 → aot_biomaps-2.9.376}/AOT_biomaps/AOT_Optic/_mainOptic.py +0 -0
  23. {aot_biomaps-2.9.374 → aot_biomaps-2.9.376}/AOT_biomaps/AOT_Recon/AOT_Optimizers/DEPIERRO.py +0 -0
  24. {aot_biomaps-2.9.374 → aot_biomaps-2.9.376}/AOT_biomaps/AOT_Recon/AOT_Optimizers/LS.py +0 -0
  25. {aot_biomaps-2.9.374 → aot_biomaps-2.9.376}/AOT_biomaps/AOT_Recon/AOT_Optimizers/MAPEM.py +0 -0
  26. {aot_biomaps-2.9.374 → aot_biomaps-2.9.376}/AOT_biomaps/AOT_Recon/AOT_Optimizers/MLEM.py +0 -0
  27. {aot_biomaps-2.9.374 → aot_biomaps-2.9.376}/AOT_biomaps/AOT_Recon/AOT_Optimizers/PDHG.py +0 -0
  28. {aot_biomaps-2.9.374 → aot_biomaps-2.9.376}/AOT_biomaps/AOT_Recon/AOT_Optimizers/__init__.py +0 -0
  29. {aot_biomaps-2.9.374 → aot_biomaps-2.9.376}/AOT_biomaps/AOT_Recon/AOT_PotentialFunctions/Huber.py +0 -0
  30. {aot_biomaps-2.9.374 → aot_biomaps-2.9.376}/AOT_biomaps/AOT_Recon/AOT_PotentialFunctions/Quadratic.py +0 -0
  31. {aot_biomaps-2.9.374 → aot_biomaps-2.9.376}/AOT_biomaps/AOT_Recon/AOT_PotentialFunctions/RelativeDifferences.py +0 -0
  32. {aot_biomaps-2.9.374 → aot_biomaps-2.9.376}/AOT_biomaps/AOT_Recon/AOT_PotentialFunctions/__init__.py +0 -0
  33. {aot_biomaps-2.9.374 → aot_biomaps-2.9.376}/AOT_biomaps/AOT_Recon/AOT_SparseSMatrix/SparseSMatrix_CSR.py +0 -0
  34. {aot_biomaps-2.9.374 → aot_biomaps-2.9.376}/AOT_biomaps/AOT_Recon/AOT_SparseSMatrix/SparseSMatrix_SELL.py +0 -0
  35. {aot_biomaps-2.9.374 → aot_biomaps-2.9.376}/AOT_biomaps/AOT_Recon/AOT_SparseSMatrix/__init__.py +0 -0
  36. {aot_biomaps-2.9.374 → aot_biomaps-2.9.376}/AOT_biomaps/AOT_Recon/AOT_biomaps_kernels.cubin +0 -0
  37. {aot_biomaps-2.9.374 → aot_biomaps-2.9.376}/AOT_biomaps/AOT_Recon/AlgebraicRecon.py +0 -0
  38. {aot_biomaps-2.9.374 → aot_biomaps-2.9.376}/AOT_biomaps/AOT_Recon/AnalyticRecon.py +0 -0
  39. {aot_biomaps-2.9.374 → aot_biomaps-2.9.376}/AOT_biomaps/AOT_Recon/BayesianRecon.py +0 -0
  40. {aot_biomaps-2.9.374 → aot_biomaps-2.9.376}/AOT_biomaps/AOT_Recon/DeepLearningRecon.py +0 -0
  41. {aot_biomaps-2.9.374 → aot_biomaps-2.9.376}/AOT_biomaps/AOT_Recon/PrimalDualRecon.py +0 -0
  42. {aot_biomaps-2.9.374 → aot_biomaps-2.9.376}/AOT_biomaps/AOT_Recon/ReconEnums.py +0 -0
  43. {aot_biomaps-2.9.374 → aot_biomaps-2.9.376}/AOT_biomaps/AOT_Recon/ReconTools.py +0 -0
  44. {aot_biomaps-2.9.374 → aot_biomaps-2.9.376}/AOT_biomaps/AOT_Recon/__init__.py +0 -0
  45. {aot_biomaps-2.9.374 → aot_biomaps-2.9.376}/AOT_biomaps/AOT_Recon/_mainRecon.py +0 -0
  46. {aot_biomaps-2.9.374 → aot_biomaps-2.9.376}/AOT_biomaps/Config.py +0 -0
  47. {aot_biomaps-2.9.374 → aot_biomaps-2.9.376}/AOT_biomaps/Settings.py +0 -0
  48. {aot_biomaps-2.9.374 → aot_biomaps-2.9.376}/AOT_biomaps.egg-info/SOURCES.txt +0 -0
  49. {aot_biomaps-2.9.374 → aot_biomaps-2.9.376}/AOT_biomaps.egg-info/dependency_links.txt +0 -0
  50. {aot_biomaps-2.9.374 → aot_biomaps-2.9.376}/AOT_biomaps.egg-info/requires.txt +0 -0
  51. {aot_biomaps-2.9.374 → aot_biomaps-2.9.376}/AOT_biomaps.egg-info/top_level.txt +0 -0
  52. {aot_biomaps-2.9.374 → aot_biomaps-2.9.376}/README.md +0 -0
  53. {aot_biomaps-2.9.374 → aot_biomaps-2.9.376}/setup.cfg +0 -0
{aot_biomaps-2.9.374 → aot_biomaps-2.9.376}/AOT_biomaps/AOT_Acoustic/_mainAcoustic.py RENAMED
@@ -106,7 +106,7 @@ class AcousticField(ABC):
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  'Nx': int(np.round((params.general['Xrange'][1] - params.general['Xrange'][0])/params.general['dx'])),
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  'Ny': int(np.round((params.general['Yrange'][1] - params.general['Yrange'][0])/params.general['dy'])) if params.general['Yrange'] is not None else 1,
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  'Nz': int(np.round((params.general['Zrange'][1] - params.general['Zrange'][0])/params.general['dz'])),
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- 'Nt': (params.general['Nt'])*int(float(params.acoustic['f_AQ']))/int(float(params.acoustic['f_saving'])) if 'Nt' in params.general else None,
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+ 'Nt': int((params.general['Nt'])*int(float(params.acoustic['f_AQ']))/int(float(params.acoustic['f_saving']))) if 'Nt' in params.general else None,
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  'probeWidth': params.acoustic['num_elements'] * params.acoustic['element_width'],
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  'IsAbsorbingMedium': params.acoustic['isAbsorbingMedium'],
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  }
@@ -123,6 +123,7 @@ class AcousticField(ABC):
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  else:
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  Nt = self.params['Nt']
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  self.kgrid.setTime(Nt,1/float(params.acoustic['f_AQ']))
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+ print(f" NT kgrid : {self.kgrid.Nt} ")
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  self.params['f_AQ'] = int(float(params.acoustic['f_AQ']))
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  self._generate_burst_signal()
{aot_biomaps-2.9.374 → aot_biomaps-2.9.376}/AOT_biomaps/__init__.py RENAMED
@@ -85,7 +85,7 @@ from .AOT_Recon.AOT_PotentialFunctions.RelativeDifferences import *
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  from .Config import config
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  from .Settings import *
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- __version__ = '2.9.374'
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+ __version__ = '2.9.376'
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  __process__ = config.get_process()
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  def initialize(process=None):
@@ -235,6 +235,8 @@ def initialize(process=None):
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{aot_biomaps-2.9.374 → aot_biomaps-2.9.376}/AOT_biomaps.egg-info/PKG-INFO RENAMED
@@ -1,6 +1,6 @@
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  Metadata-Version: 2.4
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  Name: AOT_biomaps
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- Version: 2.9.374
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+ Version: 2.9.376
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  Summary: Acousto-Optic Tomography
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  Home-page: https://github.com/LucasDuclos/AcoustoOpticTomography
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  Author: Lucas Duclos
{aot_biomaps-2.9.374 → aot_biomaps-2.9.376}/PKG-INFO RENAMED
@@ -1,6 +1,6 @@
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  Metadata-Version: 2.4
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  Name: AOT_biomaps
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- Version: 2.9.374
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+ Version: 2.9.376
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  Summary: Acousto-Optic Tomography
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  Home-page: https://github.com/LucasDuclos/AcoustoOpticTomography
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  Author: Lucas Duclos
{aot_biomaps-2.9.374 → aot_biomaps-2.9.376}/setup.py RENAMED
@@ -2,7 +2,7 @@ from setuptools import setup, find_packages
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  setup(
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  name='AOT_biomaps',
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- version='2.9.374',
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+ version='2.9.376',
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  packages=find_packages(),
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  include_package_data=True,
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@@ -393,6 +393,8 @@ setup(
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{aot_biomaps-2.9.374 → aot_biomaps-2.9.376}/README.md RENAMED
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{aot_biomaps-2.9.374 → aot_biomaps-2.9.376}/setup.cfg RENAMED
File without changes