AOT-biomaps 2.9.360__tar.gz → 2.9.362__tar.gz

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (53) hide show
  1. {aot_biomaps-2.9.360 → aot_biomaps-2.9.362}/AOT_biomaps/AOT_Experiment/Tomography.py +2 -2
  2. {aot_biomaps-2.9.360 → aot_biomaps-2.9.362}/AOT_biomaps/__init__.py +3 -1
  3. {aot_biomaps-2.9.360 → aot_biomaps-2.9.362}/AOT_biomaps.egg-info/PKG-INFO +1 -1
  4. {aot_biomaps-2.9.360 → aot_biomaps-2.9.362}/PKG-INFO +1 -1
  5. {aot_biomaps-2.9.360 → aot_biomaps-2.9.362}/setup.py +3 -1
  6. {aot_biomaps-2.9.360 → aot_biomaps-2.9.362}/AOT_biomaps/AOT_Acoustic/AcousticEnums.py +0 -0
  7. {aot_biomaps-2.9.360 → aot_biomaps-2.9.362}/AOT_biomaps/AOT_Acoustic/AcousticTools.py +0 -0
  8. {aot_biomaps-2.9.360 → aot_biomaps-2.9.362}/AOT_biomaps/AOT_Acoustic/FocusedWave.py +0 -0
  9. {aot_biomaps-2.9.360 → aot_biomaps-2.9.362}/AOT_biomaps/AOT_Acoustic/IrregularWave.py +0 -0
  10. {aot_biomaps-2.9.360 → aot_biomaps-2.9.362}/AOT_biomaps/AOT_Acoustic/PlaneWave.py +0 -0
  11. {aot_biomaps-2.9.360 → aot_biomaps-2.9.362}/AOT_biomaps/AOT_Acoustic/StructuredWave.py +0 -0
  12. {aot_biomaps-2.9.360 → aot_biomaps-2.9.362}/AOT_biomaps/AOT_Acoustic/__init__.py +0 -0
  13. {aot_biomaps-2.9.360 → aot_biomaps-2.9.362}/AOT_biomaps/AOT_Acoustic/_mainAcoustic.py +0 -0
  14. {aot_biomaps-2.9.360 → aot_biomaps-2.9.362}/AOT_biomaps/AOT_Experiment/ExperimentTools.py +0 -0
  15. {aot_biomaps-2.9.360 → aot_biomaps-2.9.362}/AOT_biomaps/AOT_Experiment/Focus.py +0 -0
  16. {aot_biomaps-2.9.360 → aot_biomaps-2.9.362}/AOT_biomaps/AOT_Experiment/__init__.py +0 -0
  17. {aot_biomaps-2.9.360 → aot_biomaps-2.9.362}/AOT_biomaps/AOT_Experiment/_mainExperiment.py +0 -0
  18. {aot_biomaps-2.9.360 → aot_biomaps-2.9.362}/AOT_biomaps/AOT_Optic/Absorber.py +0 -0
  19. {aot_biomaps-2.9.360 → aot_biomaps-2.9.362}/AOT_biomaps/AOT_Optic/Laser.py +0 -0
  20. {aot_biomaps-2.9.360 → aot_biomaps-2.9.362}/AOT_biomaps/AOT_Optic/OpticEnums.py +0 -0
  21. {aot_biomaps-2.9.360 → aot_biomaps-2.9.362}/AOT_biomaps/AOT_Optic/__init__.py +0 -0
  22. {aot_biomaps-2.9.360 → aot_biomaps-2.9.362}/AOT_biomaps/AOT_Optic/_mainOptic.py +0 -0
  23. {aot_biomaps-2.9.360 → aot_biomaps-2.9.362}/AOT_biomaps/AOT_Recon/AOT_Optimizers/DEPIERRO.py +0 -0
  24. {aot_biomaps-2.9.360 → aot_biomaps-2.9.362}/AOT_biomaps/AOT_Recon/AOT_Optimizers/LS.py +0 -0
  25. {aot_biomaps-2.9.360 → aot_biomaps-2.9.362}/AOT_biomaps/AOT_Recon/AOT_Optimizers/MAPEM.py +0 -0
  26. {aot_biomaps-2.9.360 → aot_biomaps-2.9.362}/AOT_biomaps/AOT_Recon/AOT_Optimizers/MLEM.py +0 -0
  27. {aot_biomaps-2.9.360 → aot_biomaps-2.9.362}/AOT_biomaps/AOT_Recon/AOT_Optimizers/PDHG.py +0 -0
  28. {aot_biomaps-2.9.360 → aot_biomaps-2.9.362}/AOT_biomaps/AOT_Recon/AOT_Optimizers/__init__.py +0 -0
  29. {aot_biomaps-2.9.360 → aot_biomaps-2.9.362}/AOT_biomaps/AOT_Recon/AOT_PotentialFunctions/Huber.py +0 -0
  30. {aot_biomaps-2.9.360 → aot_biomaps-2.9.362}/AOT_biomaps/AOT_Recon/AOT_PotentialFunctions/Quadratic.py +0 -0
  31. {aot_biomaps-2.9.360 → aot_biomaps-2.9.362}/AOT_biomaps/AOT_Recon/AOT_PotentialFunctions/RelativeDifferences.py +0 -0
  32. {aot_biomaps-2.9.360 → aot_biomaps-2.9.362}/AOT_biomaps/AOT_Recon/AOT_PotentialFunctions/__init__.py +0 -0
  33. {aot_biomaps-2.9.360 → aot_biomaps-2.9.362}/AOT_biomaps/AOT_Recon/AOT_SparseSMatrix/SparseSMatrix_CSR.py +0 -0
  34. {aot_biomaps-2.9.360 → aot_biomaps-2.9.362}/AOT_biomaps/AOT_Recon/AOT_SparseSMatrix/SparseSMatrix_SELL.py +0 -0
  35. {aot_biomaps-2.9.360 → aot_biomaps-2.9.362}/AOT_biomaps/AOT_Recon/AOT_SparseSMatrix/__init__.py +0 -0
  36. {aot_biomaps-2.9.360 → aot_biomaps-2.9.362}/AOT_biomaps/AOT_Recon/AOT_biomaps_kernels.cubin +0 -0
  37. {aot_biomaps-2.9.360 → aot_biomaps-2.9.362}/AOT_biomaps/AOT_Recon/AlgebraicRecon.py +0 -0
  38. {aot_biomaps-2.9.360 → aot_biomaps-2.9.362}/AOT_biomaps/AOT_Recon/AnalyticRecon.py +0 -0
  39. {aot_biomaps-2.9.360 → aot_biomaps-2.9.362}/AOT_biomaps/AOT_Recon/BayesianRecon.py +0 -0
  40. {aot_biomaps-2.9.360 → aot_biomaps-2.9.362}/AOT_biomaps/AOT_Recon/DeepLearningRecon.py +0 -0
  41. {aot_biomaps-2.9.360 → aot_biomaps-2.9.362}/AOT_biomaps/AOT_Recon/PrimalDualRecon.py +0 -0
  42. {aot_biomaps-2.9.360 → aot_biomaps-2.9.362}/AOT_biomaps/AOT_Recon/ReconEnums.py +0 -0
  43. {aot_biomaps-2.9.360 → aot_biomaps-2.9.362}/AOT_biomaps/AOT_Recon/ReconTools.py +0 -0
  44. {aot_biomaps-2.9.360 → aot_biomaps-2.9.362}/AOT_biomaps/AOT_Recon/__init__.py +0 -0
  45. {aot_biomaps-2.9.360 → aot_biomaps-2.9.362}/AOT_biomaps/AOT_Recon/_mainRecon.py +0 -0
  46. {aot_biomaps-2.9.360 → aot_biomaps-2.9.362}/AOT_biomaps/Config.py +0 -0
  47. {aot_biomaps-2.9.360 → aot_biomaps-2.9.362}/AOT_biomaps/Settings.py +0 -0
  48. {aot_biomaps-2.9.360 → aot_biomaps-2.9.362}/AOT_biomaps.egg-info/SOURCES.txt +0 -0
  49. {aot_biomaps-2.9.360 → aot_biomaps-2.9.362}/AOT_biomaps.egg-info/dependency_links.txt +0 -0
  50. {aot_biomaps-2.9.360 → aot_biomaps-2.9.362}/AOT_biomaps.egg-info/requires.txt +0 -0
  51. {aot_biomaps-2.9.360 → aot_biomaps-2.9.362}/AOT_biomaps.egg-info/top_level.txt +0 -0
  52. {aot_biomaps-2.9.360 → aot_biomaps-2.9.362}/README.md +0 -0
  53. {aot_biomaps-2.9.360 → aot_biomaps-2.9.362}/setup.cfg +0 -0
{aot_biomaps-2.9.360 → aot_biomaps-2.9.362}/AOT_biomaps/AOT_Experiment/Tomography.py RENAMED
@@ -340,6 +340,7 @@ class Tomography(Experiment):
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  if self.AOsignal_withoutTumor is not None:
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  self.AOsignal_withoutTumor = self.AOsignal_withoutTumor[:, index]
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  self.AcousticFields = newAcousticFields
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+ self.theta = [field.angle for field in newAcousticFields]
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  def selectPatterns(self, pattern_names):
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  if self.AOsignal_withTumor is None and self.AOsignal_withoutTumor is None:
@@ -440,8 +441,7 @@ class Tomography(Experiment):
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  patterns.append({"fileName": pair})
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  return patterns
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+
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  def _generate_patterns(self, N,angles = None):
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  def format_angle(a):
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  return f"{'1' if a < 0 else '0'}{abs(a):02d}"
{aot_biomaps-2.9.360 → aot_biomaps-2.9.362}/AOT_biomaps/__init__.py RENAMED
@@ -85,7 +85,7 @@ from .AOT_Recon.AOT_PotentialFunctions.RelativeDifferences import *
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  from .Config import config
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  from .Settings import *
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- __version__ = '2.9.360'
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+ __version__ = '2.9.362'
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  __process__ = config.get_process()
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  def initialize(process=None):
@@ -221,6 +221,8 @@ def initialize(process=None):
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{aot_biomaps-2.9.360 → aot_biomaps-2.9.362}/AOT_biomaps.egg-info/PKG-INFO RENAMED
@@ -1,6 +1,6 @@
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  Metadata-Version: 2.4
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  Name: AOT_biomaps
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- Version: 2.9.360
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+ Version: 2.9.362
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  Summary: Acousto-Optic Tomography
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  Home-page: https://github.com/LucasDuclos/AcoustoOpticTomography
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  Author: Lucas Duclos
{aot_biomaps-2.9.360 → aot_biomaps-2.9.362}/PKG-INFO RENAMED
@@ -1,6 +1,6 @@
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  Metadata-Version: 2.4
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  Name: AOT_biomaps
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- Version: 2.9.360
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+ Version: 2.9.362
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  Summary: Acousto-Optic Tomography
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  Home-page: https://github.com/LucasDuclos/AcoustoOpticTomography
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  Author: Lucas Duclos
{aot_biomaps-2.9.360 → aot_biomaps-2.9.362}/setup.py RENAMED
@@ -2,7 +2,7 @@ from setuptools import setup, find_packages
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  setup(
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  name='AOT_biomaps',
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- version='2.9.360',
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+ version='2.9.362',
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  packages=find_packages(),
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  include_package_data=True,
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@@ -379,6 +379,8 @@ setup(
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{aot_biomaps-2.9.360 → aot_biomaps-2.9.362}/README.md RENAMED
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{aot_biomaps-2.9.360 → aot_biomaps-2.9.362}/setup.cfg RENAMED
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