AMS-BP 0.4.40__tar.gz → 0.4.41__tar.gz

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (179) hide show
  1. {ams_bp-0.4.40 → ams_bp-0.4.41}/PKG-INFO +2 -1
  2. {ams_bp-0.4.40 → ams_bp-0.4.41}/README.md +1 -0
  3. ams_bp-0.4.41/docs/API_Documentation/core/groundtruth_generators/nuclearporecomplexes.md +1 -0
  4. ams_bp-0.4.41/examples/QuantitativeExperiments/FRAP/FRAP_methods.ipynb +1026 -0
  5. ams_bp-0.4.41/examples/QuantitativeExperiments/PALM/fPALM/npc_palm.ipynb +1084 -0
  6. {ams_bp-0.4.40 → ams_bp-0.4.41}/examples/QuantitativeExperiments/PALM/sptPALM/motionmodels_sptmmaple.ipynb +47 -41
  7. ams_bp-0.4.41/examples/QuantitativeExperiments/TwoColor/Confocal/confocal_twocolor.ipynb +1395 -0
  8. ams_bp-0.4.41/examples/QuantitativeExperiments/TwoColor/Widefield/widefield_twocolor.ipynb +1424 -0
  9. ams_bp-0.4.41/examples/VisualizingIndividualModules/laser_modulation.ipynb +1085 -0
  10. ams_bp-0.4.41/examples/VisualizingIndividualModules/modules_explained.ipynb +1456 -0
  11. {ams_bp-0.4.40 → ams_bp-0.4.41}/src/AMS_BP/__init__.py +1 -1
  12. {ams_bp-0.4.40 → ams_bp-0.4.41}/src/AMS_BP/gui/widgets/laser_config_widget.py +56 -11
  13. {ams_bp-0.4.40 → ams_bp-0.4.41}/uv.lock +1 -1
  14. ams_bp-0.4.40/docs/API_Documentation/core/groundtruth_generators/nuclearporecomplexes.md +0 -1
  15. ams_bp-0.4.40/examples/QuantitativeExperiments/FRAP/FRAP_methods.ipynb +0 -1028
  16. ams_bp-0.4.40/examples/QuantitativeExperiments/PALM/fPALM/npc_palm.ipynb +0 -1084
  17. ams_bp-0.4.40/examples/QuantitativeExperiments/TwoColor/Confocal/confocal_twocolor.ipynb +0 -1407
  18. ams_bp-0.4.40/examples/QuantitativeExperiments/TwoColor/Widefield/widefield_twocolor.ipynb +0 -1436
  19. ams_bp-0.4.40/examples/VisualizingIndividualModules/laser_modulation.ipynb +0 -1087
  20. ams_bp-0.4.40/examples/VisualizingIndividualModules/modules_explained.ipynb +0 -1468
  21. {ams_bp-0.4.40 → ams_bp-0.4.41}/.github/workflows/lint.yml +0 -0
  22. {ams_bp-0.4.40 → ams_bp-0.4.41}/.github/workflows/pages.yml +0 -0
  23. {ams_bp-0.4.40 → ams_bp-0.4.41}/.github/workflows/publish_pypi.yml +0 -0
  24. {ams_bp-0.4.40 → ams_bp-0.4.41}/.gitignore +0 -0
  25. {ams_bp-0.4.40 → ams_bp-0.4.41}/LICENSE +0 -0
  26. {ams_bp-0.4.40 → ams_bp-0.4.41}/docs/API_Documentation/core/configio/configmodels.md +0 -0
  27. {ams_bp-0.4.40 → ams_bp-0.4.41}/docs/API_Documentation/core/configio/convertconfig.md +0 -0
  28. {ams_bp-0.4.40 → ams_bp-0.4.41}/docs/API_Documentation/core/configio/experiments.md +0 -0
  29. {ams_bp-0.4.40 → ams_bp-0.4.41}/docs/API_Documentation/core/configio/saving.md +0 -0
  30. {ams_bp-0.4.40 → ams_bp-0.4.41}/docs/API_Documentation/core/metadata/metadata.md +0 -0
  31. {ams_bp-0.4.40 → ams_bp-0.4.41}/docs/API_Documentation/core/motion/condensate_movement.md +0 -0
  32. {ams_bp-0.4.40 → ams_bp-0.4.41}/docs/API_Documentation/core/motion/movement/boundary_conditions.md +0 -0
  33. {ams_bp-0.4.40 → ams_bp-0.4.41}/docs/API_Documentation/core/motion/movement/fbm_BP.md +0 -0
  34. {ams_bp-0.4.40 → ams_bp-0.4.41}/docs/API_Documentation/core/motion/track_gen.md +0 -0
  35. {ams_bp-0.4.40 → ams_bp-0.4.41}/docs/API_Documentation/core/optics/camera/detectors.md +0 -0
  36. {ams_bp-0.4.40 → ams_bp-0.4.41}/docs/API_Documentation/core/optics/camera/quantum_eff.md +0 -0
  37. {ams_bp-0.4.40 → ams_bp-0.4.41}/docs/API_Documentation/core/optics/filters/channels/channelschema.md +0 -0
  38. {ams_bp-0.4.40 → ams_bp-0.4.41}/docs/API_Documentation/core/optics/filters/filters.md +0 -0
  39. {ams_bp-0.4.40 → ams_bp-0.4.41}/docs/API_Documentation/core/optics/lasers/laser_profiles.md +0 -0
  40. {ams_bp-0.4.40 → ams_bp-0.4.41}/docs/API_Documentation/core/optics/psf/psf_engine.md +0 -0
  41. {ams_bp-0.4.40 → ams_bp-0.4.41}/docs/API_Documentation/core/photophysics/photon_physics.md +0 -0
  42. {ams_bp-0.4.40 → ams_bp-0.4.41}/docs/API_Documentation/core/photophysics/state_kinetics.md +0 -0
  43. {ams_bp-0.4.40 → ams_bp-0.4.41}/docs/API_Documentation/core/probabilityfuncs/markov_chain.md +0 -0
  44. {ams_bp-0.4.40 → ams_bp-0.4.41}/docs/API_Documentation/core/probabilityfuncs/probability_functions.md +0 -0
  45. {ams_bp-0.4.40 → ams_bp-0.4.41}/docs/API_Documentation/core/sample/flurophore/flurophore_schema.md +0 -0
  46. {ams_bp-0.4.40 → ams_bp-0.4.41}/docs/API_Documentation/core/sample/sim_sampleplane.md +0 -0
  47. {ams_bp-0.4.40 → ams_bp-0.4.41}/docs/API_Documentation/core/sim_microscopy.md +0 -0
  48. {ams_bp-0.4.40 → ams_bp-0.4.41}/docs/API_Documentation/main_cli.md +0 -0
  49. {ams_bp-0.4.40 → ams_bp-0.4.41}/docs/API_Documentation/sim_config.md +0 -0
  50. {ams_bp-0.4.40 → ams_bp-0.4.41}/docs/API_Documentation/utils/constants.md +0 -0
  51. {ams_bp-0.4.40 → ams_bp-0.4.41}/docs/API_Documentation/utils/errors.md +0 -0
  52. {ams_bp-0.4.40 → ams_bp-0.4.41}/docs/API_Documentation/utils/util_functions.md +0 -0
  53. {ams_bp-0.4.40 → ams_bp-0.4.41}/docs/assets/buttons/ButtonFigure_FRAP.svg +0 -0
  54. {ams_bp-0.4.40 → ams_bp-0.4.41}/docs/assets/buttons/ButtonFigure_fPALM_NPC.svg +0 -0
  55. {ams_bp-0.4.40 → ams_bp-0.4.41}/docs/assets/buttons/ButtonFigure_sptPALM_mmaple.svg +0 -0
  56. {ams_bp-0.4.40 → ams_bp-0.4.41}/docs/assets/buttons/ButtonFigure_zstack_twocolor_confocal.svg +0 -0
  57. {ams_bp-0.4.40 → ams_bp-0.4.41}/docs/assets/buttons/ButtonFigure_zstack_twocolor_widefield.svg +0 -0
  58. {ams_bp-0.4.40 → ams_bp-0.4.41}/docs/assets/figures/Fig1_Schema.svg +0 -0
  59. {ams_bp-0.4.40 → ams_bp-0.4.41}/docs/assets/icons/Cells-actin-like-a-tree-Jamie-Whitelaw-1.png +0 -0
  60. {ams_bp-0.4.40 → ams_bp-0.4.41}/docs/assets/icons/drawing.pdf +0 -0
  61. {ams_bp-0.4.40 → ams_bp-0.4.41}/docs/assets/icons/drawing.png +0 -0
  62. {ams_bp-0.4.40 → ams_bp-0.4.41}/docs/assets/icons/drawing.svg +0 -0
  63. {ams_bp-0.4.40 → ams_bp-0.4.41}/docs/index.md +0 -0
  64. {ams_bp-0.4.40 → ams_bp-0.4.41}/examples/QuantitativeExperiments/FRAP/FRAP_base_[[0. 0.]].txt +0 -0
  65. {ams_bp-0.4.40 → ams_bp-0.4.41}/examples/QuantitativeExperiments/FRAP/FRAP_base_[[0.04 0.04]].txt +0 -0
  66. {ams_bp-0.4.40 → ams_bp-0.4.41}/examples/QuantitativeExperiments/FRAP/FRAP_base_[[0.1 0.1]].txt +0 -0
  67. {ams_bp-0.4.40 → ams_bp-0.4.41}/examples/QuantitativeExperiments/FRAP/FRAP_base_[[0.4 0.4]].txt +0 -0
  68. {ams_bp-0.4.40 → ams_bp-0.4.41}/examples/QuantitativeExperiments/FRAP/FRAP_data_[[0. 0.]].txt +0 -0
  69. {ams_bp-0.4.40 → ams_bp-0.4.41}/examples/QuantitativeExperiments/FRAP/FRAP_data_[[0.04 0.04]].txt +0 -0
  70. {ams_bp-0.4.40 → ams_bp-0.4.41}/examples/QuantitativeExperiments/FRAP/FRAP_data_[[0.1 0.1]].txt +0 -0
  71. {ams_bp-0.4.40 → ams_bp-0.4.41}/examples/QuantitativeExperiments/FRAP/FRAP_data_[[0.4 0.4]].txt +0 -0
  72. {ams_bp-0.4.40 → ams_bp-0.4.41}/examples/QuantitativeExperiments/MotionModels/groundtruth_boundedfbm.ipynb +0 -0
  73. {ams_bp-0.4.40 → ams_bp-0.4.41}/examples/QuantitativeExperiments/PALM/fPALM/export_full2_0039_039.csv +0 -0
  74. {ams_bp-0.4.40 → ams_bp-0.4.41}/mkdocs.yml +0 -0
  75. {ams_bp-0.4.40 → ams_bp-0.4.41}/pyproject.toml +0 -0
  76. {ams_bp-0.4.40 → ams_bp-0.4.41}/pytest.ini +0 -0
  77. {ams_bp-0.4.40 → ams_bp-0.4.41}/src/AMS_BP/core/__init__.py +0 -0
  78. {ams_bp-0.4.40 → ams_bp-0.4.41}/src/AMS_BP/core/cells/__init__.py +0 -0
  79. {ams_bp-0.4.40 → ams_bp-0.4.41}/src/AMS_BP/core/cells/budding_yeast_cell.py +0 -0
  80. {ams_bp-0.4.40 → ams_bp-0.4.41}/src/AMS_BP/core/cells/cell_factory.py +0 -0
  81. {ams_bp-0.4.40 → ams_bp-0.4.41}/src/AMS_BP/core/configio/__init__.py +0 -0
  82. {ams_bp-0.4.40 → ams_bp-0.4.41}/src/AMS_BP/core/configio/configmodels.py +0 -0
  83. {ams_bp-0.4.40 → ams_bp-0.4.41}/src/AMS_BP/core/configio/convertconfig.py +0 -0
  84. {ams_bp-0.4.40 → ams_bp-0.4.41}/src/AMS_BP/core/configio/experiments.py +0 -0
  85. {ams_bp-0.4.40 → ams_bp-0.4.41}/src/AMS_BP/core/configio/saving.py +0 -0
  86. {ams_bp-0.4.40 → ams_bp-0.4.41}/src/AMS_BP/core/groundtruth_generators/__init__.py +0 -0
  87. {ams_bp-0.4.40 → ams_bp-0.4.41}/src/AMS_BP/core/groundtruth_generators/nuclearporecomplexes.py +0 -0
  88. {ams_bp-0.4.40 → ams_bp-0.4.41}/src/AMS_BP/core/metadata/__init__.py +0 -0
  89. {ams_bp-0.4.40 → ams_bp-0.4.41}/src/AMS_BP/core/metadata/metadata.py +0 -0
  90. {ams_bp-0.4.40 → ams_bp-0.4.41}/src/AMS_BP/core/motion/__init__.py +0 -0
  91. {ams_bp-0.4.40 → ams_bp-0.4.41}/src/AMS_BP/core/motion/condensate_movement.py +0 -0
  92. {ams_bp-0.4.40 → ams_bp-0.4.41}/src/AMS_BP/core/motion/movement/__init__.py +0 -0
  93. {ams_bp-0.4.40 → ams_bp-0.4.41}/src/AMS_BP/core/motion/movement/boundary_conditions.py +0 -0
  94. {ams_bp-0.4.40 → ams_bp-0.4.41}/src/AMS_BP/core/motion/track_gen.py +0 -0
  95. {ams_bp-0.4.40 → ams_bp-0.4.41}/src/AMS_BP/core/optics/__init__.py +0 -0
  96. {ams_bp-0.4.40 → ams_bp-0.4.41}/src/AMS_BP/core/optics/camera/__init__.py +0 -0
  97. {ams_bp-0.4.40 → ams_bp-0.4.41}/src/AMS_BP/core/optics/camera/detectors.py +0 -0
  98. {ams_bp-0.4.40 → ams_bp-0.4.41}/src/AMS_BP/core/optics/camera/quantum_eff.py +0 -0
  99. {ams_bp-0.4.40 → ams_bp-0.4.41}/src/AMS_BP/core/optics/filters/__init__.py +0 -0
  100. {ams_bp-0.4.40 → ams_bp-0.4.41}/src/AMS_BP/core/optics/filters/channels/__init__.py +0 -0
  101. {ams_bp-0.4.40 → ams_bp-0.4.41}/src/AMS_BP/core/optics/filters/channels/channelschema.py +0 -0
  102. {ams_bp-0.4.40 → ams_bp-0.4.41}/src/AMS_BP/core/optics/filters/filters.py +0 -0
  103. {ams_bp-0.4.40 → ams_bp-0.4.41}/src/AMS_BP/core/optics/lasers/__init__.py +0 -0
  104. {ams_bp-0.4.40 → ams_bp-0.4.41}/src/AMS_BP/core/optics/lasers/laser_profiles.py +0 -0
  105. {ams_bp-0.4.40 → ams_bp-0.4.41}/src/AMS_BP/core/optics/lasers/scanning_patterns.py +0 -0
  106. {ams_bp-0.4.40 → ams_bp-0.4.41}/src/AMS_BP/core/optics/psf/__init__.py +0 -0
  107. {ams_bp-0.4.40 → ams_bp-0.4.41}/src/AMS_BP/core/optics/psf/psf_engine.py +0 -0
  108. {ams_bp-0.4.40 → ams_bp-0.4.41}/src/AMS_BP/core/photophysics/__init__.py +0 -0
  109. {ams_bp-0.4.40 → ams_bp-0.4.41}/src/AMS_BP/core/photophysics/photon_physics.py +0 -0
  110. {ams_bp-0.4.40 → ams_bp-0.4.41}/src/AMS_BP/core/photophysics/state_kinetics.py +0 -0
  111. {ams_bp-0.4.40 → ams_bp-0.4.41}/src/AMS_BP/core/probabilityfuncs/__init__.py +0 -0
  112. {ams_bp-0.4.40 → ams_bp-0.4.41}/src/AMS_BP/core/probabilityfuncs/markov_chain.py +0 -0
  113. {ams_bp-0.4.40 → ams_bp-0.4.41}/src/AMS_BP/core/probabilityfuncs/probability_functions.py +0 -0
  114. {ams_bp-0.4.40 → ams_bp-0.4.41}/src/AMS_BP/core/run_sim_util.py +0 -0
  115. {ams_bp-0.4.40 → ams_bp-0.4.41}/src/AMS_BP/core/sample/__init__.py +0 -0
  116. {ams_bp-0.4.40 → ams_bp-0.4.41}/src/AMS_BP/core/sample/flurophores/__init__.py +0 -0
  117. {ams_bp-0.4.40 → ams_bp-0.4.41}/src/AMS_BP/core/sample/flurophores/flurophore_schema.py +0 -0
  118. {ams_bp-0.4.40 → ams_bp-0.4.41}/src/AMS_BP/core/sample/sim_sampleplane.py +0 -0
  119. {ams_bp-0.4.40 → ams_bp-0.4.41}/src/AMS_BP/core/sim_microscopy.py +0 -0
  120. {ams_bp-0.4.40 → ams_bp-0.4.41}/src/AMS_BP/gui/README.md +0 -0
  121. {ams_bp-0.4.40 → ams_bp-0.4.41}/src/AMS_BP/gui/__init__.py +0 -0
  122. {ams_bp-0.4.40 → ams_bp-0.4.41}/src/AMS_BP/gui/assets/__init__.py +0 -0
  123. {ams_bp-0.4.40 → ams_bp-0.4.41}/src/AMS_BP/gui/assets/drawing.svg +0 -0
  124. {ams_bp-0.4.40 → ams_bp-0.4.41}/src/AMS_BP/gui/help_docs/__init__.py +0 -0
  125. {ams_bp-0.4.40 → ams_bp-0.4.41}/src/AMS_BP/gui/help_docs/cell_help.md +0 -0
  126. {ams_bp-0.4.40 → ams_bp-0.4.41}/src/AMS_BP/gui/help_docs/channels_help.md +0 -0
  127. {ams_bp-0.4.40 → ams_bp-0.4.41}/src/AMS_BP/gui/help_docs/condensate_help.md +0 -0
  128. {ams_bp-0.4.40 → ams_bp-0.4.41}/src/AMS_BP/gui/help_docs/detector_help.md +0 -0
  129. {ams_bp-0.4.40 → ams_bp-0.4.41}/src/AMS_BP/gui/help_docs/experiment_help.md +0 -0
  130. {ams_bp-0.4.40 → ams_bp-0.4.41}/src/AMS_BP/gui/help_docs/fluorophore_help.md +0 -0
  131. {ams_bp-0.4.40 → ams_bp-0.4.41}/src/AMS_BP/gui/help_docs/general_help.md +0 -0
  132. {ams_bp-0.4.40 → ams_bp-0.4.41}/src/AMS_BP/gui/help_docs/global_help.md +0 -0
  133. {ams_bp-0.4.40 → ams_bp-0.4.41}/src/AMS_BP/gui/help_docs/laser_help.md +0 -0
  134. {ams_bp-0.4.40 → ams_bp-0.4.41}/src/AMS_BP/gui/help_docs/molecule_help.md +0 -0
  135. {ams_bp-0.4.40 → ams_bp-0.4.41}/src/AMS_BP/gui/help_docs/output_help.md +0 -0
  136. {ams_bp-0.4.40 → ams_bp-0.4.41}/src/AMS_BP/gui/help_docs/psf_help.md +0 -0
  137. {ams_bp-0.4.40 → ams_bp-0.4.41}/src/AMS_BP/gui/main.py +0 -0
  138. {ams_bp-0.4.40 → ams_bp-0.4.41}/src/AMS_BP/gui/sim_worker.py +0 -0
  139. {ams_bp-0.4.40 → ams_bp-0.4.41}/src/AMS_BP/gui/themes/dark_theme.qss +0 -0
  140. {ams_bp-0.4.40 → ams_bp-0.4.41}/src/AMS_BP/gui/themes/light_theme.qss +0 -0
  141. {ams_bp-0.4.40 → ams_bp-0.4.41}/src/AMS_BP/gui/widgets/__init__.py +0 -0
  142. {ams_bp-0.4.40 → ams_bp-0.4.41}/src/AMS_BP/gui/widgets/camera_config_widget.py +0 -0
  143. {ams_bp-0.4.40 → ams_bp-0.4.41}/src/AMS_BP/gui/widgets/cell_config_widget.py +0 -0
  144. {ams_bp-0.4.40 → ams_bp-0.4.41}/src/AMS_BP/gui/widgets/channel_config_widget.py +0 -0
  145. {ams_bp-0.4.40 → ams_bp-0.4.41}/src/AMS_BP/gui/widgets/condensate_config_widget.py +0 -0
  146. {ams_bp-0.4.40 → ams_bp-0.4.41}/src/AMS_BP/gui/widgets/experiment_config_widget.py +0 -0
  147. {ams_bp-0.4.40 → ams_bp-0.4.41}/src/AMS_BP/gui/widgets/flurophore_config_widget.py +0 -0
  148. {ams_bp-0.4.40 → ams_bp-0.4.41}/src/AMS_BP/gui/widgets/general_config_widget.py +0 -0
  149. {ams_bp-0.4.40 → ams_bp-0.4.41}/src/AMS_BP/gui/widgets/global_config_widget.py +0 -0
  150. {ams_bp-0.4.40 → ams_bp-0.4.41}/src/AMS_BP/gui/widgets/molecule_config_widget.py +0 -0
  151. {ams_bp-0.4.40 → ams_bp-0.4.41}/src/AMS_BP/gui/widgets/output_config_widget.py +0 -0
  152. {ams_bp-0.4.40 → ams_bp-0.4.41}/src/AMS_BP/gui/widgets/psf_config_widget.py +0 -0
  153. {ams_bp-0.4.40 → ams_bp-0.4.41}/src/AMS_BP/gui/widgets/utility_widgets/__init__.py +0 -0
  154. {ams_bp-0.4.40 → ams_bp-0.4.41}/src/AMS_BP/gui/widgets/utility_widgets/scinotation_widget.py +0 -0
  155. {ams_bp-0.4.40 → ams_bp-0.4.41}/src/AMS_BP/gui/widgets/utility_widgets/spectrum_widget.py +0 -0
  156. {ams_bp-0.4.40 → ams_bp-0.4.41}/src/AMS_BP/gui/widgets/utility_widgets/toggleswitch_widget.py +0 -0
  157. {ams_bp-0.4.40 → ams_bp-0.4.41}/src/AMS_BP/gui/windows/__init__.py +0 -0
  158. {ams_bp-0.4.40 → ams_bp-0.4.41}/src/AMS_BP/gui/windows/configuration_window.py +0 -0
  159. {ams_bp-0.4.40 → ams_bp-0.4.41}/src/AMS_BP/gui/windows/help_window.py +0 -0
  160. {ams_bp-0.4.40 → ams_bp-0.4.41}/src/AMS_BP/gui/windows/logging_window.py +0 -0
  161. {ams_bp-0.4.40 → ams_bp-0.4.41}/src/AMS_BP/gui/windows/template_window_selection.py +0 -0
  162. {ams_bp-0.4.40 → ams_bp-0.4.41}/src/AMS_BP/main_cli.py +0 -0
  163. {ams_bp-0.4.40 → ams_bp-0.4.41}/src/AMS_BP/resources/template_configs/metadata_configs.json +0 -0
  164. {ams_bp-0.4.40 → ams_bp-0.4.41}/src/AMS_BP/resources/template_configs/sim_config.toml +0 -0
  165. {ams_bp-0.4.40 → ams_bp-0.4.41}/src/AMS_BP/resources/template_configs/twocolor_confocal_timeseries_live.toml +0 -0
  166. {ams_bp-0.4.40 → ams_bp-0.4.41}/src/AMS_BP/resources/template_configs/twocolor_confocal_zstack_fixed.toml +0 -0
  167. {ams_bp-0.4.40 → ams_bp-0.4.41}/src/AMS_BP/resources/template_configs/twocolor_confocal_zstack_live.toml +0 -0
  168. {ams_bp-0.4.40 → ams_bp-0.4.41}/src/AMS_BP/resources/template_configs/twocolor_widefield_timeseries_live.toml +0 -0
  169. {ams_bp-0.4.40 → ams_bp-0.4.41}/src/AMS_BP/resources/template_configs/twocolor_widefield_zstack_fixed.toml +0 -0
  170. {ams_bp-0.4.40 → ams_bp-0.4.41}/src/AMS_BP/resources/template_configs/twocolor_widefield_zstack_live.toml +0 -0
  171. {ams_bp-0.4.40 → ams_bp-0.4.41}/src/AMS_BP/tools/logging/__init__.py +0 -0
  172. {ams_bp-0.4.40 → ams_bp-0.4.41}/src/AMS_BP/tools/logging/logutil.py +0 -0
  173. {ams_bp-0.4.40 → ams_bp-0.4.41}/src/AMS_BP/tools/logging/setup_run_directory.py +0 -0
  174. {ams_bp-0.4.40 → ams_bp-0.4.41}/src/AMS_BP/utils/__init__.py +0 -0
  175. {ams_bp-0.4.40 → ams_bp-0.4.41}/src/AMS_BP/utils/constants.py +0 -0
  176. {ams_bp-0.4.40 → ams_bp-0.4.41}/src/AMS_BP/utils/decorators.py +0 -0
  177. {ams_bp-0.4.40 → ams_bp-0.4.41}/src/AMS_BP/utils/errors.py +0 -0
  178. {ams_bp-0.4.40 → ams_bp-0.4.41}/src/AMS_BP/utils/maskMaker.py +0 -0
  179. {ams_bp-0.4.40 → ams_bp-0.4.41}/src/AMS_BP/utils/util_functions.py +0 -0
{ams_bp-0.4.40 → ams_bp-0.4.41}/PKG-INFO RENAMED
@@ -1,6 +1,6 @@
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  Metadata-Version: 2.4
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  Name: AMS_BP
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- Version: 0.4.40
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+ Version: 0.4.41
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  Summary: Advanced Microscopy Simulations developed for the Weber Lab by Baljyot Singh Parmar
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  Project-URL: Documentation, https://joemans3.github.io/AMS_BP/
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  Project-URL: Source code, https://github.com/joemans3/AMS_BP
@@ -125,6 +125,7 @@ To start the GUI, run:
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  run_AMS_BP gui
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  ```
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+ Please note, the first time the package is used it will take a minute to start.
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  For detailed walkthrough see the [GUI Documentation](./src/AMS_BP/gui/README.md).
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  ## Configuration File
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{ams_bp-0.4.40 → ams_bp-0.4.41}/README.md RENAMED
@@ -99,6 +99,7 @@ To start the GUI, run:
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  run_AMS_BP gui
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  ```
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+ Please note, the first time the package is used it will take a minute to start.
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  For detailed walkthrough see the [GUI Documentation](./src/AMS_BP/gui/README.md).
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  ## Configuration File
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ams_bp-0.4.41/docs/API_Documentation/core/groundtruth_generators/nuclearporecomplexes.md ADDED
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+ ::: AMS_BP.core.groundtruth_generators.nuclearporecomplexes