molstar 3.6.0 → 3.8.0

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (410) hide show
  1. package/LICENSE +20 -20
  2. package/README.md +202 -202
  3. package/build/viewer/embedded.html +43 -43
  4. package/build/viewer/index.html +106 -106
  5. package/build/viewer/molstar.css +1 -1
  6. package/build/viewer/molstar.js +1 -1
  7. package/build/viewer/molstar.js.LICENSE.txt +0 -15
  8. package/lib/apps/docking-viewer/index.html +36 -36
  9. package/lib/apps/viewer/embedded.html +43 -43
  10. package/lib/apps/viewer/index.html +106 -106
  11. package/lib/cli/chem-comp-dict/create-ions.d.ts +2 -1
  12. package/lib/cli/chem-comp-dict/create-ions.js +3 -2
  13. package/lib/cli/cifschema/index.js +1 -1
  14. package/lib/cli/cifschema/util/cif-dic.js +1 -0
  15. package/lib/commonjs/cli/chem-comp-dict/create-ions.d.ts +2 -1
  16. package/lib/commonjs/cli/chem-comp-dict/create-ions.js +3 -2
  17. package/lib/commonjs/cli/cifschema/index.js +1 -1
  18. package/lib/commonjs/cli/cifschema/util/cif-dic.js +1 -0
  19. package/lib/commonjs/examples/alpha-orbitals/index.js +20 -15
  20. package/lib/commonjs/examples/proteopedia-wrapper/coloring.d.ts +20 -5
  21. package/lib/commonjs/extensions/anvil/behavior.d.ts +1 -1
  22. package/lib/commonjs/extensions/anvil/representation.d.ts +4 -4
  23. package/lib/commonjs/extensions/cellpack/representation.d.ts +1 -1
  24. package/lib/commonjs/extensions/dnatco/confal-pyramids/representation.d.ts +3 -3
  25. package/lib/commonjs/extensions/rcsb/assembly-symmetry/behavior.d.ts +1 -1
  26. package/lib/commonjs/extensions/rcsb/assembly-symmetry/representation.d.ts +1 -1
  27. package/lib/commonjs/extensions/rcsb/graphql/types.d.ts +284 -0
  28. package/lib/commonjs/extensions/rcsb/validation-report/representation.d.ts +5 -5
  29. package/lib/commonjs/mol-canvas3d/canvas3d.d.ts +2 -2
  30. package/lib/commonjs/mol-canvas3d/helper/camera-helper.d.ts +1 -1
  31. package/lib/commonjs/mol-canvas3d/helper/handle-helper.d.ts +1 -1
  32. package/lib/commonjs/mol-canvas3d/helper/helper.d.ts +2 -2
  33. package/lib/commonjs/mol-canvas3d/passes/draw.d.ts +0 -2
  34. package/lib/commonjs/mol-canvas3d/passes/draw.js +35 -70
  35. package/lib/commonjs/mol-canvas3d/passes/image.d.ts +1 -1
  36. package/lib/commonjs/mol-canvas3d/passes/pick.d.ts +1 -1
  37. package/lib/commonjs/mol-canvas3d/passes/pick.js +1 -1
  38. package/lib/commonjs/mol-canvas3d/passes/postprocessing.d.ts +1 -0
  39. package/lib/commonjs/mol-canvas3d/passes/postprocessing.js +16 -11
  40. package/lib/commonjs/mol-geo/geometry/color-data.d.ts +7 -10
  41. package/lib/commonjs/mol-geo/geometry/color-data.js +7 -4
  42. package/lib/commonjs/mol-geo/geometry/cylinders/cylinders.d.ts +2 -2
  43. package/lib/commonjs/mol-geo/geometry/cylinders/cylinders.js +3 -2
  44. package/lib/commonjs/mol-geo/geometry/lines/lines.d.ts +1 -0
  45. package/lib/commonjs/mol-geo/geometry/mesh/mesh.d.ts +1 -1
  46. package/lib/commonjs/mol-geo/geometry/mesh/mesh.js +3 -2
  47. package/lib/commonjs/mol-geo/geometry/points/points.d.ts +1 -1
  48. package/lib/commonjs/mol-geo/geometry/spheres/spheres.d.ts +1 -1
  49. package/lib/commonjs/mol-geo/geometry/spheres/spheres.js +3 -2
  50. package/lib/commonjs/mol-geo/geometry/texture-mesh/texture-mesh.d.ts +1 -1
  51. package/lib/commonjs/mol-geo/geometry/texture-mesh/texture-mesh.js +15 -4
  52. package/lib/commonjs/mol-geo/geometry/transparency-data.d.ts +1 -1
  53. package/lib/commonjs/mol-geo/geometry/transparency-data.js +3 -1
  54. package/lib/commonjs/mol-gl/renderable/cylinders.d.ts +2 -1
  55. package/lib/commonjs/mol-gl/renderable/cylinders.js +2 -2
  56. package/lib/commonjs/mol-gl/renderable/mesh.d.ts +2 -1
  57. package/lib/commonjs/mol-gl/renderable/mesh.js +2 -2
  58. package/lib/commonjs/mol-gl/renderable/schema.d.ts +2 -2
  59. package/lib/commonjs/mol-gl/renderable/schema.js +2 -2
  60. package/lib/commonjs/mol-gl/renderable/spheres.d.ts +2 -1
  61. package/lib/commonjs/mol-gl/renderable/spheres.js +2 -2
  62. package/lib/commonjs/mol-gl/renderable/texture-mesh.d.ts +2 -1
  63. package/lib/commonjs/mol-gl/renderable/texture-mesh.js +2 -2
  64. package/lib/commonjs/mol-gl/renderer.d.ts +5 -5
  65. package/lib/commonjs/mol-gl/renderer.js +114 -64
  66. package/lib/commonjs/mol-gl/scene.d.ts +1 -0
  67. package/lib/commonjs/mol-gl/scene.js +26 -1
  68. package/lib/commonjs/mol-gl/shader/chunks/apply-interior-color.glsl.d.ts +1 -1
  69. package/lib/commonjs/mol-gl/shader/chunks/apply-interior-color.glsl.js +1 -1
  70. package/lib/commonjs/mol-gl/shader/chunks/assign-material-color.glsl.d.ts +1 -1
  71. package/lib/commonjs/mol-gl/shader/chunks/assign-material-color.glsl.js +1 -1
  72. package/lib/commonjs/mol-gl/shader/chunks/check-picking-alpha.glsl.d.ts +1 -1
  73. package/lib/commonjs/mol-gl/shader/chunks/check-picking-alpha.glsl.js +1 -1
  74. package/lib/commonjs/mol-gl/shader/chunks/color-vert-params.glsl.d.ts +1 -1
  75. package/lib/commonjs/mol-gl/shader/chunks/color-vert-params.glsl.js +1 -1
  76. package/lib/commonjs/mol-gl/shader/chunks/common-frag-params.glsl.d.ts +1 -1
  77. package/lib/commonjs/mol-gl/shader/chunks/common-frag-params.glsl.js +1 -1
  78. package/lib/commonjs/mol-gl/shader/chunks/common.glsl.d.ts +1 -1
  79. package/lib/commonjs/mol-gl/shader/chunks/common.glsl.js +1 -1
  80. package/lib/commonjs/mol-gl/shader/chunks/wboit-write.glsl.d.ts +1 -1
  81. package/lib/commonjs/mol-gl/shader/chunks/wboit-write.glsl.js +1 -1
  82. package/lib/commonjs/mol-gl/shader/direct-volume.frag.d.ts +1 -1
  83. package/lib/commonjs/mol-gl/shader/direct-volume.frag.js +1 -1
  84. package/lib/commonjs/mol-gl/shader/image.frag.d.ts +1 -1
  85. package/lib/commonjs/mol-gl/shader/image.frag.js +1 -1
  86. package/lib/commonjs/mol-gl/shader/outlines.frag.d.ts +3 -2
  87. package/lib/commonjs/mol-gl/shader/outlines.frag.js +3 -2
  88. package/lib/commonjs/mol-gl/shader/postprocessing.frag.d.ts +1 -1
  89. package/lib/commonjs/mol-gl/shader/postprocessing.frag.js +1 -1
  90. package/lib/commonjs/mol-gl/shader/ssao.frag.d.ts +2 -2
  91. package/lib/commonjs/mol-gl/shader/ssao.frag.js +2 -2
  92. package/lib/commonjs/mol-gl/webgl/render-target.d.ts +3 -1
  93. package/lib/commonjs/mol-gl/webgl/render-target.js +3 -1
  94. package/lib/commonjs/mol-gl/webgl/renderbuffer.d.ts +2 -1
  95. package/lib/commonjs/mol-gl/webgl/renderbuffer.js +8 -1
  96. package/lib/commonjs/mol-gl/webgl/state.d.ts +7 -1
  97. package/lib/commonjs/mol-gl/webgl/state.js +28 -1
  98. package/lib/commonjs/mol-gl/webgl/texture.js +3 -0
  99. package/lib/commonjs/mol-io/reader/cif/schema/bird.d.ts +1 -1
  100. package/lib/commonjs/mol-io/reader/cif/schema/bird.js +1 -1
  101. package/lib/commonjs/mol-io/reader/cif/schema/ccd.d.ts +1 -1
  102. package/lib/commonjs/mol-io/reader/cif/schema/ccd.js +1 -1
  103. package/lib/commonjs/mol-io/reader/cif/schema/cif-core.d.ts +1 -1
  104. package/lib/commonjs/mol-io/reader/cif/schema/cif-core.js +1 -1
  105. package/lib/commonjs/mol-io/reader/cif/schema/mmcif.d.ts +3 -4
  106. package/lib/commonjs/mol-io/reader/cif/schema/mmcif.js +2 -3
  107. package/lib/commonjs/mol-io/reader/dx/parser.js +1 -1
  108. package/lib/commonjs/mol-io/writer/ligand-encoder.d.ts +4 -2
  109. package/lib/commonjs/mol-io/writer/ligand-encoder.js +9 -4
  110. package/lib/commonjs/mol-io/writer/mol/encoder.js +16 -4
  111. package/lib/commonjs/mol-io/writer/mol2/encoder.js +17 -4
  112. package/lib/commonjs/mol-math/geometry/lookup3d/grid.d.ts +1 -1
  113. package/lib/commonjs/mol-math/geometry/lookup3d/grid.js +3 -3
  114. package/lib/commonjs/mol-model/structure/model/properties/seconday-structure.d.ts +4 -2
  115. package/lib/commonjs/mol-model/structure/model/properties/seconday-structure.js +2 -1
  116. package/lib/commonjs/mol-model/structure/model/types/ions.d.ts +2 -2
  117. package/lib/commonjs/mol-model/structure/model/types/ions.js +2 -2
  118. package/lib/commonjs/mol-model/structure/model/types/saccharides.js +1 -1
  119. package/lib/commonjs/mol-model/structure/model/types.d.ts +1 -1
  120. package/lib/commonjs/mol-model/structure/model/types.js +43 -41
  121. package/lib/commonjs/mol-model-formats/shape/ply.d.ts +2 -2
  122. package/lib/commonjs/mol-model-formats/structure/common/property.js +2 -0
  123. package/lib/commonjs/mol-model-formats/structure/property/secondary-structure.d.ts +1 -1
  124. package/lib/commonjs/mol-model-formats/structure/property/secondary-structure.js +2 -2
  125. package/lib/commonjs/mol-model-props/computed/representations/interactions-inter-unit-cylinder.d.ts +1 -1
  126. package/lib/commonjs/mol-model-props/computed/representations/interactions-intra-unit-cylinder.d.ts +1 -1
  127. package/lib/commonjs/mol-model-props/computed/representations/interactions.d.ts +3 -3
  128. package/lib/commonjs/mol-model-props/integrative/cross-link-restraint/representation.d.ts +4 -4
  129. package/lib/commonjs/mol-plugin/behavior/dynamic/volume-streaming/model.d.ts +3 -2
  130. package/lib/commonjs/mol-plugin/commands.d.ts +1 -1
  131. package/lib/commonjs/mol-plugin/util/viewport-screenshot.d.ts +3 -3
  132. package/lib/commonjs/mol-plugin-state/helpers/root-structure.js +3 -1
  133. package/lib/commonjs/mol-plugin-state/transforms/representation.d.ts +6 -6
  134. package/lib/commonjs/mol-plugin-ui/base.d.ts +3 -1
  135. package/lib/commonjs/mol-plugin-ui/controls/color.d.ts +1 -1
  136. package/lib/commonjs/mol-plugin-ui/controls/common.d.ts +2 -0
  137. package/lib/commonjs/mol-plugin-ui/hooks/use-behavior.d.ts +1 -1
  138. package/lib/commonjs/mol-plugin-ui/hooks/use-behavior.js +21 -7
  139. package/lib/commonjs/mol-plugin-ui/plugin.d.ts +2 -0
  140. package/lib/commonjs/mol-plugin-ui/plugin.js +2 -2
  141. package/lib/commonjs/mol-plugin-ui/spec.d.ts +1 -0
  142. package/lib/commonjs/mol-plugin-ui/state/common.js +6 -7
  143. package/lib/commonjs/mol-plugin-ui/task.d.ts +2 -21
  144. package/lib/commonjs/mol-plugin-ui/task.js +39 -43
  145. package/lib/commonjs/mol-plugin-ui/viewport/help.d.ts +4 -1
  146. package/lib/commonjs/mol-repr/shape/loci/angle.d.ts +1 -1
  147. package/lib/commonjs/mol-repr/shape/loci/dihedral.d.ts +1 -1
  148. package/lib/commonjs/mol-repr/shape/loci/orientation.d.ts +1 -1
  149. package/lib/commonjs/mol-repr/shape/loci/plane.d.ts +1 -1
  150. package/lib/commonjs/mol-repr/shape/model/unitcell.d.ts +1 -1
  151. package/lib/commonjs/mol-repr/structure/complex-visual.d.ts +3 -3
  152. package/lib/commonjs/mol-repr/structure/params.d.ts +4 -4
  153. package/lib/commonjs/mol-repr/structure/registry.d.ts +10 -10
  154. package/lib/commonjs/mol-repr/structure/representation/backbone.d.ts +3 -3
  155. package/lib/commonjs/mol-repr/structure/representation/ball-and-stick.d.ts +3 -3
  156. package/lib/commonjs/mol-repr/structure/representation/carbohydrate.d.ts +3 -3
  157. package/lib/commonjs/mol-repr/structure/representation/cartoon.d.ts +3 -3
  158. package/lib/commonjs/mol-repr/structure/representation/ellipsoid.d.ts +3 -3
  159. package/lib/commonjs/mol-repr/structure/representation/gaussian-surface.d.ts +3 -3
  160. package/lib/commonjs/mol-repr/structure/representation/molecular-surface.d.ts +3 -3
  161. package/lib/commonjs/mol-repr/structure/representation/orientation.d.ts +3 -3
  162. package/lib/commonjs/mol-repr/structure/representation/putty.d.ts +3 -3
  163. package/lib/commonjs/mol-repr/structure/representation/spacefill.d.ts +3 -3
  164. package/lib/commonjs/mol-repr/structure/units-visual.d.ts +4 -4
  165. package/lib/commonjs/mol-repr/structure/visual/bond-inter-unit-cylinder.d.ts +2 -2
  166. package/lib/commonjs/mol-repr/structure/visual/bond-intra-unit-cylinder.d.ts +2 -2
  167. package/lib/commonjs/mol-repr/structure/visual/carbohydrate-link-cylinder.d.ts +1 -1
  168. package/lib/commonjs/mol-repr/structure/visual/carbohydrate-symbol-mesh.d.ts +1 -1
  169. package/lib/commonjs/mol-repr/structure/visual/carbohydrate-terminal-link-cylinder.d.ts +1 -1
  170. package/lib/commonjs/mol-repr/structure/visual/element-sphere.d.ts +2 -2
  171. package/lib/commonjs/mol-repr/structure/visual/ellipsoid-mesh.d.ts +1 -1
  172. package/lib/commonjs/mol-repr/structure/visual/gaussian-surface-mesh.d.ts +4 -4
  173. package/lib/commonjs/mol-repr/structure/visual/molecular-surface-mesh.d.ts +1 -1
  174. package/lib/commonjs/mol-repr/structure/visual/nucleotide-block-mesh.d.ts +1 -1
  175. package/lib/commonjs/mol-repr/structure/visual/nucleotide-ring-mesh.d.ts +1 -1
  176. package/lib/commonjs/mol-repr/structure/visual/orientation-ellipsoid-mesh.d.ts +1 -1
  177. package/lib/commonjs/mol-repr/structure/visual/polymer-backbone-cylinder.d.ts +2 -2
  178. package/lib/commonjs/mol-repr/structure/visual/polymer-backbone-sphere.d.ts +2 -2
  179. package/lib/commonjs/mol-repr/structure/visual/polymer-direction-wedge.d.ts +1 -1
  180. package/lib/commonjs/mol-repr/structure/visual/polymer-gap-cylinder.d.ts +1 -1
  181. package/lib/commonjs/mol-repr/structure/visual/polymer-trace-mesh.d.ts +1 -1
  182. package/lib/commonjs/mol-repr/structure/visual/polymer-tube-mesh.d.ts +1 -1
  183. package/lib/commonjs/mol-repr/util.d.ts +1 -1
  184. package/lib/commonjs/mol-repr/util.js +1 -1
  185. package/lib/commonjs/mol-repr/volume/isosurface.d.ts +5 -5
  186. package/lib/commonjs/mol-repr/volume/registry.d.ts +1 -1
  187. package/lib/commonjs/mol-repr/volume/slice.js +1 -1
  188. package/lib/commonjs/mol-script/language/builder.d.ts +0 -1
  189. package/lib/commonjs/mol-theme/color/volume-value.d.ts +3 -2
  190. package/lib/commonjs/mol-theme/color/volume-value.js +1 -3
  191. package/lib/commonjs/mol-theme/color.d.ts +55 -39
  192. package/lib/commonjs/mol-theme/color.js +1 -1
  193. package/lib/commonjs/mol-theme/theme.d.ts +8 -7
  194. package/lib/commonjs/mol-theme/theme.js +1 -1
  195. package/lib/commonjs/servers/model/server/query.js +1 -3
  196. package/lib/commonjs/servers/model/version.d.ts +1 -1
  197. package/lib/commonjs/servers/model/version.js +1 -1
  198. package/lib/examples/alpha-orbitals/index.html +61 -61
  199. package/lib/examples/alpha-orbitals/index.js +20 -15
  200. package/lib/examples/basic-wrapper/index.html +137 -137
  201. package/lib/examples/lighting/index.html +88 -88
  202. package/lib/examples/proteopedia-wrapper/coloring.d.ts +20 -5
  203. package/lib/examples/proteopedia-wrapper/index.html +236 -236
  204. package/lib/extensions/anvil/behavior.d.ts +1 -1
  205. package/lib/extensions/anvil/representation.d.ts +4 -4
  206. package/lib/extensions/cellpack/representation.d.ts +1 -1
  207. package/lib/extensions/dnatco/confal-pyramids/representation.d.ts +3 -3
  208. package/lib/extensions/rcsb/assembly-symmetry/behavior.d.ts +1 -1
  209. package/lib/extensions/rcsb/assembly-symmetry/representation.d.ts +1 -1
  210. package/lib/extensions/rcsb/graphql/types.d.ts +284 -0
  211. package/lib/extensions/rcsb/validation-report/representation.d.ts +5 -5
  212. package/lib/mol-canvas3d/canvas3d.d.ts +2 -2
  213. package/lib/mol-canvas3d/helper/camera-helper.d.ts +1 -1
  214. package/lib/mol-canvas3d/helper/handle-helper.d.ts +1 -1
  215. package/lib/mol-canvas3d/helper/helper.d.ts +2 -2
  216. package/lib/mol-canvas3d/passes/draw.d.ts +0 -2
  217. package/lib/mol-canvas3d/passes/draw.js +32 -67
  218. package/lib/mol-canvas3d/passes/image.d.ts +1 -1
  219. package/lib/mol-canvas3d/passes/pick.d.ts +1 -1
  220. package/lib/mol-canvas3d/passes/pick.js +1 -1
  221. package/lib/mol-canvas3d/passes/postprocessing.d.ts +1 -0
  222. package/lib/mol-canvas3d/passes/postprocessing.js +16 -11
  223. package/lib/mol-geo/geometry/color-data.d.ts +7 -10
  224. package/lib/mol-geo/geometry/color-data.js +7 -4
  225. package/lib/mol-geo/geometry/cylinders/cylinders.d.ts +2 -2
  226. package/lib/mol-geo/geometry/cylinders/cylinders.js +3 -2
  227. package/lib/mol-geo/geometry/lines/lines.d.ts +1 -0
  228. package/lib/mol-geo/geometry/mesh/mesh.d.ts +1 -1
  229. package/lib/mol-geo/geometry/mesh/mesh.js +3 -2
  230. package/lib/mol-geo/geometry/points/points.d.ts +1 -1
  231. package/lib/mol-geo/geometry/spheres/spheres.d.ts +1 -1
  232. package/lib/mol-geo/geometry/spheres/spheres.js +3 -2
  233. package/lib/mol-geo/geometry/texture-mesh/texture-mesh.d.ts +1 -1
  234. package/lib/mol-geo/geometry/texture-mesh/texture-mesh.js +15 -4
  235. package/lib/mol-geo/geometry/transparency-data.d.ts +1 -1
  236. package/lib/mol-geo/geometry/transparency-data.js +3 -1
  237. package/lib/mol-gl/renderable/cylinders.d.ts +2 -1
  238. package/lib/mol-gl/renderable/cylinders.js +2 -2
  239. package/lib/mol-gl/renderable/mesh.d.ts +2 -1
  240. package/lib/mol-gl/renderable/mesh.js +2 -2
  241. package/lib/mol-gl/renderable/schema.d.ts +2 -2
  242. package/lib/mol-gl/renderable/schema.js +2 -2
  243. package/lib/mol-gl/renderable/spheres.d.ts +2 -1
  244. package/lib/mol-gl/renderable/spheres.js +2 -2
  245. package/lib/mol-gl/renderable/texture-mesh.d.ts +2 -1
  246. package/lib/mol-gl/renderable/texture-mesh.js +2 -2
  247. package/lib/mol-gl/renderer.d.ts +5 -5
  248. package/lib/mol-gl/renderer.js +114 -64
  249. package/lib/mol-gl/scene.d.ts +1 -0
  250. package/lib/mol-gl/scene.js +26 -1
  251. package/lib/mol-gl/shader/chunks/apply-interior-color.glsl.d.ts +1 -1
  252. package/lib/mol-gl/shader/chunks/apply-interior-color.glsl.js +1 -1
  253. package/lib/mol-gl/shader/chunks/assign-material-color.glsl.d.ts +1 -1
  254. package/lib/mol-gl/shader/chunks/assign-material-color.glsl.js +1 -1
  255. package/lib/mol-gl/shader/chunks/check-picking-alpha.glsl.d.ts +1 -1
  256. package/lib/mol-gl/shader/chunks/check-picking-alpha.glsl.js +1 -1
  257. package/lib/mol-gl/shader/chunks/color-vert-params.glsl.d.ts +1 -1
  258. package/lib/mol-gl/shader/chunks/color-vert-params.glsl.js +1 -1
  259. package/lib/mol-gl/shader/chunks/common-frag-params.glsl.d.ts +1 -1
  260. package/lib/mol-gl/shader/chunks/common-frag-params.glsl.js +1 -1
  261. package/lib/mol-gl/shader/chunks/common.glsl.d.ts +1 -1
  262. package/lib/mol-gl/shader/chunks/common.glsl.js +1 -1
  263. package/lib/mol-gl/shader/chunks/wboit-write.glsl.d.ts +1 -1
  264. package/lib/mol-gl/shader/chunks/wboit-write.glsl.js +1 -1
  265. package/lib/mol-gl/shader/direct-volume.frag.d.ts +1 -1
  266. package/lib/mol-gl/shader/direct-volume.frag.js +1 -1
  267. package/lib/mol-gl/shader/image.frag.d.ts +1 -1
  268. package/lib/mol-gl/shader/image.frag.js +1 -1
  269. package/lib/mol-gl/shader/outlines.frag.d.ts +3 -2
  270. package/lib/mol-gl/shader/outlines.frag.js +3 -2
  271. package/lib/mol-gl/shader/postprocessing.frag.d.ts +1 -1
  272. package/lib/mol-gl/shader/postprocessing.frag.js +1 -1
  273. package/lib/mol-gl/shader/ssao.frag.d.ts +2 -2
  274. package/lib/mol-gl/shader/ssao.frag.js +2 -2
  275. package/lib/mol-gl/webgl/render-target.d.ts +3 -1
  276. package/lib/mol-gl/webgl/render-target.js +3 -1
  277. package/lib/mol-gl/webgl/renderbuffer.d.ts +2 -1
  278. package/lib/mol-gl/webgl/renderbuffer.js +8 -1
  279. package/lib/mol-gl/webgl/state.d.ts +7 -1
  280. package/lib/mol-gl/webgl/state.js +28 -1
  281. package/lib/mol-gl/webgl/texture.js +3 -0
  282. package/lib/mol-io/reader/cif/schema/bird.d.ts +1 -1
  283. package/lib/mol-io/reader/cif/schema/bird.js +1 -1
  284. package/lib/mol-io/reader/cif/schema/ccd.d.ts +1 -1
  285. package/lib/mol-io/reader/cif/schema/ccd.js +1 -1
  286. package/lib/mol-io/reader/cif/schema/cif-core.d.ts +1 -1
  287. package/lib/mol-io/reader/cif/schema/cif-core.js +1 -1
  288. package/lib/mol-io/reader/cif/schema/mmcif.d.ts +3 -4
  289. package/lib/mol-io/reader/cif/schema/mmcif.js +2 -3
  290. package/lib/mol-io/reader/dx/parser.js +1 -1
  291. package/lib/mol-io/writer/ligand-encoder.d.ts +4 -2
  292. package/lib/mol-io/writer/ligand-encoder.js +9 -4
  293. package/lib/mol-io/writer/mol/encoder.js +16 -4
  294. package/lib/mol-io/writer/mol2/encoder.js +17 -4
  295. package/lib/mol-math/geometry/lookup3d/grid.d.ts +1 -1
  296. package/lib/mol-math/geometry/lookup3d/grid.js +3 -3
  297. package/lib/mol-model/structure/model/properties/seconday-structure.d.ts +4 -2
  298. package/lib/mol-model/structure/model/properties/seconday-structure.js +2 -1
  299. package/lib/mol-model/structure/model/types/ions.d.ts +2 -2
  300. package/lib/mol-model/structure/model/types/ions.js +2 -2
  301. package/lib/mol-model/structure/model/types/saccharides.js +1 -1
  302. package/lib/mol-model/structure/model/types.d.ts +1 -1
  303. package/lib/mol-model/structure/model/types.js +43 -41
  304. package/lib/mol-model-formats/shape/ply.d.ts +2 -2
  305. package/lib/mol-model-formats/structure/common/property.js +2 -0
  306. package/lib/mol-model-formats/structure/property/secondary-structure.d.ts +1 -1
  307. package/lib/mol-model-formats/structure/property/secondary-structure.js +2 -2
  308. package/lib/mol-model-props/computed/representations/interactions-inter-unit-cylinder.d.ts +1 -1
  309. package/lib/mol-model-props/computed/representations/interactions-intra-unit-cylinder.d.ts +1 -1
  310. package/lib/mol-model-props/computed/representations/interactions.d.ts +3 -3
  311. package/lib/mol-model-props/integrative/cross-link-restraint/representation.d.ts +4 -4
  312. package/lib/mol-plugin/behavior/dynamic/volume-streaming/model.d.ts +3 -2
  313. package/lib/mol-plugin/commands.d.ts +1 -1
  314. package/lib/mol-plugin/util/viewport-screenshot.d.ts +3 -3
  315. package/lib/mol-plugin/version.js +2 -2
  316. package/lib/mol-plugin-state/helpers/root-structure.js +3 -1
  317. package/lib/mol-plugin-state/transforms/representation.d.ts +6 -6
  318. package/lib/mol-plugin-ui/base.d.ts +3 -1
  319. package/lib/mol-plugin-ui/controls/color.d.ts +1 -1
  320. package/lib/mol-plugin-ui/controls/common.d.ts +2 -0
  321. package/lib/mol-plugin-ui/hooks/use-behavior.d.ts +1 -1
  322. package/lib/mol-plugin-ui/hooks/use-behavior.js +20 -7
  323. package/lib/mol-plugin-ui/plugin.d.ts +2 -0
  324. package/lib/mol-plugin-ui/plugin.js +2 -2
  325. package/lib/mol-plugin-ui/skin/base/base.scss +32 -32
  326. package/lib/mol-plugin-ui/skin/base/components/controls-base.scss +333 -333
  327. package/lib/mol-plugin-ui/skin/base/components/controls.scss +418 -418
  328. package/lib/mol-plugin-ui/skin/base/components/help.scss +27 -27
  329. package/lib/mol-plugin-ui/skin/base/components/line-graph.scss +67 -67
  330. package/lib/mol-plugin-ui/skin/base/components/log.scss +100 -100
  331. package/lib/mol-plugin-ui/skin/base/components/misc.scss +643 -643
  332. package/lib/mol-plugin-ui/skin/base/components/sequence.scss +125 -125
  333. package/lib/mol-plugin-ui/skin/base/components/slider.scss +165 -165
  334. package/lib/mol-plugin-ui/skin/base/components/tasks.scss +99 -99
  335. package/lib/mol-plugin-ui/skin/base/components/toast.scss +83 -83
  336. package/lib/mol-plugin-ui/skin/base/components/transformer.scss +163 -163
  337. package/lib/mol-plugin-ui/skin/base/components/viewport.scss +128 -128
  338. package/lib/mol-plugin-ui/skin/base/layout/common.scss +71 -71
  339. package/lib/mol-plugin-ui/skin/base/layout/controls-landscape.scss +89 -89
  340. package/lib/mol-plugin-ui/skin/base/layout/controls-outside.scss +98 -98
  341. package/lib/mol-plugin-ui/skin/base/layout/controls-portrait.scss +108 -108
  342. package/lib/mol-plugin-ui/skin/base/layout.scss +40 -40
  343. package/lib/mol-plugin-ui/skin/base/logo.scss +12 -12
  344. package/lib/mol-plugin-ui/skin/base/normalize.scss +209 -209
  345. package/lib/mol-plugin-ui/skin/base/ui.scss +40 -40
  346. package/lib/mol-plugin-ui/skin/base/variables.scss +85 -85
  347. package/lib/mol-plugin-ui/skin/blue.scss +1 -1
  348. package/lib/mol-plugin-ui/skin/colors/blue.scss +23 -23
  349. package/lib/mol-plugin-ui/skin/colors/dark.scss +23 -23
  350. package/lib/mol-plugin-ui/skin/colors/light.scss +29 -29
  351. package/lib/mol-plugin-ui/skin/dark.scss +1 -1
  352. package/lib/mol-plugin-ui/skin/light.scss +1 -1
  353. package/lib/mol-plugin-ui/spec.d.ts +1 -0
  354. package/lib/mol-plugin-ui/state/common.js +7 -8
  355. package/lib/mol-plugin-ui/task.d.ts +2 -21
  356. package/lib/mol-plugin-ui/task.js +40 -46
  357. package/lib/mol-plugin-ui/viewport/help.d.ts +4 -1
  358. package/lib/mol-repr/shape/loci/angle.d.ts +1 -1
  359. package/lib/mol-repr/shape/loci/dihedral.d.ts +1 -1
  360. package/lib/mol-repr/shape/loci/orientation.d.ts +1 -1
  361. package/lib/mol-repr/shape/loci/plane.d.ts +1 -1
  362. package/lib/mol-repr/shape/model/unitcell.d.ts +1 -1
  363. package/lib/mol-repr/structure/complex-visual.d.ts +3 -3
  364. package/lib/mol-repr/structure/params.d.ts +4 -4
  365. package/lib/mol-repr/structure/registry.d.ts +10 -10
  366. package/lib/mol-repr/structure/representation/backbone.d.ts +3 -3
  367. package/lib/mol-repr/structure/representation/ball-and-stick.d.ts +3 -3
  368. package/lib/mol-repr/structure/representation/carbohydrate.d.ts +3 -3
  369. package/lib/mol-repr/structure/representation/cartoon.d.ts +3 -3
  370. package/lib/mol-repr/structure/representation/ellipsoid.d.ts +3 -3
  371. package/lib/mol-repr/structure/representation/gaussian-surface.d.ts +3 -3
  372. package/lib/mol-repr/structure/representation/molecular-surface.d.ts +3 -3
  373. package/lib/mol-repr/structure/representation/orientation.d.ts +3 -3
  374. package/lib/mol-repr/structure/representation/putty.d.ts +3 -3
  375. package/lib/mol-repr/structure/representation/spacefill.d.ts +3 -3
  376. package/lib/mol-repr/structure/units-visual.d.ts +4 -4
  377. package/lib/mol-repr/structure/visual/bond-inter-unit-cylinder.d.ts +2 -2
  378. package/lib/mol-repr/structure/visual/bond-intra-unit-cylinder.d.ts +2 -2
  379. package/lib/mol-repr/structure/visual/carbohydrate-link-cylinder.d.ts +1 -1
  380. package/lib/mol-repr/structure/visual/carbohydrate-symbol-mesh.d.ts +1 -1
  381. package/lib/mol-repr/structure/visual/carbohydrate-terminal-link-cylinder.d.ts +1 -1
  382. package/lib/mol-repr/structure/visual/element-sphere.d.ts +2 -2
  383. package/lib/mol-repr/structure/visual/ellipsoid-mesh.d.ts +1 -1
  384. package/lib/mol-repr/structure/visual/gaussian-surface-mesh.d.ts +4 -4
  385. package/lib/mol-repr/structure/visual/molecular-surface-mesh.d.ts +1 -1
  386. package/lib/mol-repr/structure/visual/nucleotide-block-mesh.d.ts +1 -1
  387. package/lib/mol-repr/structure/visual/nucleotide-ring-mesh.d.ts +1 -1
  388. package/lib/mol-repr/structure/visual/orientation-ellipsoid-mesh.d.ts +1 -1
  389. package/lib/mol-repr/structure/visual/polymer-backbone-cylinder.d.ts +2 -2
  390. package/lib/mol-repr/structure/visual/polymer-backbone-sphere.d.ts +2 -2
  391. package/lib/mol-repr/structure/visual/polymer-direction-wedge.d.ts +1 -1
  392. package/lib/mol-repr/structure/visual/polymer-gap-cylinder.d.ts +1 -1
  393. package/lib/mol-repr/structure/visual/polymer-trace-mesh.d.ts +1 -1
  394. package/lib/mol-repr/structure/visual/polymer-tube-mesh.d.ts +1 -1
  395. package/lib/mol-repr/util.d.ts +1 -1
  396. package/lib/mol-repr/util.js +1 -1
  397. package/lib/mol-repr/volume/isosurface.d.ts +5 -5
  398. package/lib/mol-repr/volume/registry.d.ts +1 -1
  399. package/lib/mol-repr/volume/slice.js +1 -1
  400. package/lib/mol-script/language/builder.d.ts +0 -1
  401. package/lib/mol-theme/color/volume-value.d.ts +3 -2
  402. package/lib/mol-theme/color/volume-value.js +2 -4
  403. package/lib/mol-theme/color.d.ts +55 -39
  404. package/lib/mol-theme/color.js +1 -1
  405. package/lib/mol-theme/theme.d.ts +8 -7
  406. package/lib/mol-theme/theme.js +1 -1
  407. package/lib/servers/model/server/query.js +1 -3
  408. package/lib/servers/model/version.d.ts +1 -1
  409. package/lib/servers/model/version.js +1 -1
  410. package/package.json +162 -162

There are too many changes on this page to be displayed.


The amount of changes on this page would crash your brower.

You can still verify the content by downloading the package file manually.