milens 0.6.9 → 0.7.0

package/adapters/claude-code/.claude/mcp.json

@@ -1,9 +1,9 @@
-{
-  "mcpServers": {
-    "milens": {
-      "command": "milens",
-      "args": ["serve", "-p", "."],
-      "env": { "MILENS_PROFILE": "standard" }
-    }
-  }
-}
+{
+  "mcpServers": {
+    "milens": {
+      "command": "milens",
+      "args": ["serve", "-p", "."],
+      "env": { "MILENS_PROFILE": "standard" }
+    }
+  }
+}

package/adapters/claude-code/CLAUDE.md

@@ -1,79 +1,79 @@
-# Milens — Code Intelligence for Claude Code
-
-## ⚠️ BEFORE ANYTHING ELSE
-
-This project is indexed by **milens**. You have MCP tools that are faster and more accurate than reading files directly.
-
-**HARD RULE: Use milens tools BEFORE built-in search/read tools.**
-
-| Situation | Built-in approach (❌) | Milens approach (✅) |
-|---|---|---|
-| Understand a function | Read 3-10 files | `mcp_milens_overview({name: "X"})` — 1 call |
-| Find references | grep in files | `mcp_milens_grep({pattern: "X"})` — searches everything |
-| Check edit safety | Hope nothing breaks | `mcp_milens_impact({target: "X"})` — exact blast radius |
-| Start working | Read README, explore files | `mcp_milens_codebase_summary()` — 500 token overview |
-| Before commit | `git diff` manually | `mcp_milens_detect_changes()` — symbols + risk scores |
-
-**If you skip milens tools, you're wasting tokens and risking breaking changes.**
-
-## ⭐ Core Tools (Use Every Session)
-
-| Tool | Purpose |
-|---|---|
-| `mcp_milens_overview` | **Use this first.** Context + impact + grep combined. 1 call replaces 3-5 file reads. |
-| `mcp_milens_impact` | Blast radius BEFORE editing. Shows what WILL BREAK. |
-| `mcp_milens_edit_check` | Pre-edit safety: callers, export status, re-export chains, test coverage |
-| `mcp_milens_context` | 360° view: incoming refs + outgoing deps |
-| `mcp_milens_query` | Find symbol definitions by name (camelCase/PascalCase/snake_case) |
-| `mcp_milens_grep` | Text search ALL project files (code, templates, docs, configs, styles) |
-| `mcp_milens_detect_changes` | Pre-commit: changed symbols + dependents + risk scores |
-| `mcp_milens_codebase_summary` | 500-token project overview. Use instead of reading README. |
-
-### 🔧 Situational Tools (Use When Needed)
-
-| Tool | Purpose | Use when... |
-|---|---|---|
-| `mcp_milens_guard_edit_check` | Hard pre-edit gate with audit tracking | Before every edit |
-| `mcp_milens_trace` | Execution flow from entrypoints | Debugging call chains |
-| `mcp_milens_explain_relationship` | Shortest path between two symbols | Understanding connections |
-| `mcp_milens_get_file_symbols` | All symbols in a file with ref/dep counts | Exploring a file |
-| `mcp_milens_get_type_hierarchy` | Inheritance/implementation tree | Class exploration |
-| `mcp_milens_find_dead_code` | Unused exported symbols | Before major refactors |
-| `mcp_milens_status` | Index health: symbols, links, files, coverage | Session start |
-
-All tool calls must include `repo` set to the absolute workspace root.
-
-## Session Workflow
-
-1. **Start** — The milens MCP server connects via `milens serve -p .`. Verify with `mcp_milens_status`.
-2. **Recall** — When asked to work on a symbol, use `mcp_milens_overview` for a combined view of context, impact, and text references.
-3. **Code** — Make changes following the edit-safety rules below.
-4. **Verify** — Before committing, run `mcp_milens_detect_changes` to confirm only expected files changed.
-5. **Annotate** — After significant changes, run `npx milens analyze -p . --force` to keep the index fresh.
-
-## Edit Safety (Mandatory)
-
-**Before editing any function, class, or method:**
-1. Call `mcp_milens_edit_check` on the target symbol to see callers and export status.
-2. If depth-1 dependents > 5, **stop and warn the user** before proceeding.
-3. Call `mcp_milens_context` to understand the full caller/callee picture.
-4. Only then make the edit.
-
-**Before deleting or renaming:**
-1. `mcp_milens_grep` — find ALL text references (templates, configs, docs).
-2. `mcp_milens_impact` with `direction: "upstream"` — find code-level dependents.
-3. Combine both results before acting.
-
-**Before committing:**
-- Call `mcp_milens_detect_changes` — if unexpected files appear, stop and report.
-
-## Tool Selection
-
-- Use `mcp_milens_query` for symbol names (camelCase, PascalCase, snake_case).
-- Use `mcp_milens_grep` for multi-word phrases, UI labels, error messages, or text in templates/configs/docs.
-- When in doubt, use `mcp_milens_grep` first — it searches everything.
-
-## Reference
-
-See `AGENTS.md` at the repo root for project-specific context and codebase structure.
-Skill files at `.agents/skills/milens/SKILL.md` provide advanced workflow guides.
+# Milens — Code Intelligence for Claude Code
+
+## ⚠️ BEFORE ANYTHING ELSE
+
+This project is indexed by **milens**. You have MCP tools that are faster and more accurate than reading files directly.
+
+**HARD RULE: Use milens tools BEFORE built-in search/read tools.**
+
+| Situation | Built-in approach (❌) | Milens approach (✅) |
+|---|---|---|
+| Understand a function | Read 3-10 files | `mcp_milens_overview({name: "X"})` — 1 call |
+| Find references | grep in files | `mcp_milens_grep({pattern: "X"})` — searches everything |
+| Check edit safety | Hope nothing breaks | `mcp_milens_impact({target: "X"})` — exact blast radius |
+| Start working | Read README, explore files | `mcp_milens_codebase_summary()` — 500 token overview |
+| Before commit | `git diff` manually | `mcp_milens_detect_changes()` — symbols + risk scores |
+
+**If you skip milens tools, you're wasting tokens and risking breaking changes.**
+
+## ⭐ Core Tools (Use Every Session)
+
+| Tool | Purpose |
+|---|---|
+| `mcp_milens_overview` | **Use this first.** Context + impact + grep combined. 1 call replaces 3-5 file reads. |
+| `mcp_milens_impact` | Blast radius BEFORE editing. Shows what WILL BREAK. |
+| `mcp_milens_edit_check` | Pre-edit safety: callers, export status, re-export chains, test coverage |
+| `mcp_milens_context` | 360° view: incoming refs + outgoing deps |
+| `mcp_milens_query` | Find symbol definitions by name (camelCase/PascalCase/snake_case) |
+| `mcp_milens_grep` | Text search ALL project files (code, templates, docs, configs, styles) |
+| `mcp_milens_detect_changes` | Pre-commit: changed symbols + dependents + risk scores |
+| `mcp_milens_codebase_summary` | 500-token project overview. Use instead of reading README. |
+
+### 🔧 Situational Tools (Use When Needed)
+
+| Tool | Purpose | Use when... |
+|---|---|---|
+| `mcp_milens_guard_edit_check` | Hard pre-edit gate with audit tracking | Before every edit |
+| `mcp_milens_trace` | Execution flow from entrypoints | Debugging call chains |
+| `mcp_milens_explain_relationship` | Shortest path between two symbols | Understanding connections |
+| `mcp_milens_get_file_symbols` | All symbols in a file with ref/dep counts | Exploring a file |
+| `mcp_milens_get_type_hierarchy` | Inheritance/implementation tree | Class exploration |
+| `mcp_milens_find_dead_code` | Unused exported symbols | Before major refactors |
+| `mcp_milens_status` | Index health: symbols, links, files, coverage | Session start |
+
+All tool calls must include `repo` set to the absolute workspace root.
+
+## Session Workflow
+
+1. **Start** — The milens MCP server connects via `milens serve -p .`. Verify with `mcp_milens_status`.
+2. **Recall** — When asked to work on a symbol, use `mcp_milens_overview` for a combined view of context, impact, and text references.
+3. **Code** — Make changes following the edit-safety rules below.
+4. **Verify** — Before committing, run `mcp_milens_detect_changes` to confirm only expected files changed.
+5. **Annotate** — After significant changes, run `npx milens analyze -p . --force` to keep the index fresh.
+
+## Edit Safety (Mandatory)
+
+**Before editing any function, class, or method:**
+1. Call `mcp_milens_edit_check` on the target symbol to see callers and export status.
+2. If depth-1 dependents > 5, **stop and warn the user** before proceeding.
+3. Call `mcp_milens_context` to understand the full caller/callee picture.
+4. Only then make the edit.
+
+**Before deleting or renaming:**
+1. `mcp_milens_grep` — find ALL text references (templates, configs, docs).
+2. `mcp_milens_impact` with `direction: "upstream"` — find code-level dependents.
+3. Combine both results before acting.
+
+**Before committing:**
+- Call `mcp_milens_detect_changes` — if unexpected files appear, stop and report.
+
+## Tool Selection
+
+- Use `mcp_milens_query` for symbol names (camelCase, PascalCase, snake_case).
+- Use `mcp_milens_grep` for multi-word phrases, UI labels, error messages, or text in templates/configs/docs.
+- When in doubt, use `mcp_milens_grep` first — it searches everything.
+
+## Reference
+
+See `AGENTS.md` at the repo root for project-specific context and codebase structure.
+Skill files at `.agents/skills/milens/SKILL.md` provide advanced workflow guides.

package/adapters/gemini/.gemini/context.md

@@ -1,81 +1,81 @@
-# Milens — Code Intelligence
-
-## ⚠️ BEFORE ANYTHING ELSE
-
-This project is indexed by **milens**. You have MCP tools that are faster and more accurate than reading files directly.
-
-**HARD RULE: Use milens tools BEFORE built-in search/read tools.**
-
-| Situation | Built-in approach (❌) | Milens approach (✅) |
-|---|---|---|
-| Understand a function | Read 3-10 files | `mcp_milens_overview({name: "X"})` — 1 call |
-| Find references | grep in files | `mcp_milens_grep({pattern: "X"})` — searches everything |
-| Check edit safety | Hope nothing breaks | `mcp_milens_impact({target: "X"})` — exact blast radius |
-| Start working | Read README, explore files | `mcp_milens_codebase_summary()` — 500 token overview |
-| Before commit | `git diff` manually | `mcp_milens_detect_changes()` — symbols + risk scores |
-
-**If you skip milens tools, you're wasting tokens and risking breaking changes.**
-
-## MCP Connection
-
-```json
-{
-  "mcpServers": {
-    "milens": {
-      "command": "milens",
-      "args": ["serve", "-p", "${workspaceFolder}"],
-      "env": { "MILENS_PROFILE": "standard" }
-    }
-  }
-}
-```
-
-All milens MCP calls require the `repo` parameter set to the absolute workspace root.
-
-## ⭐ Core Tools (Use Every Session)
-
-| Tool | Description |
-|---|---|
-| `mcp_milens_overview` | **Use this first.** Context + impact + grep combined. 1 call replaces 3-5 file reads. |
-| `mcp_milens_impact` | Blast radius BEFORE editing. Shows what WILL BREAK. |
-| `mcp_milens_edit_check` | Pre-edit safety: callers, export status, re-export chains, test coverage |
-| `mcp_milens_context` | Full incoming + outgoing dependency view |
-| `mcp_milens_query` | Symbol search by name |
-| `mcp_milens_grep` | Text search everywhere (templates, configs, docs, styles) |
-| `mcp_milens_detect_changes` | Pre-commit: changed symbols + dependents + risk scores |
-| `mcp_milens_codebase_summary` | 500-token project overview. Use instead of reading README. |
-
-### 🔧 Situational Tools (Use When Needed)
-
-| Tool | Description | Use when... |
-|---|---|---|
-| `mcp_milens_guard_edit_check` | Hard pre-edit gate with audit tracking | Before every edit |
-| `mcp_milens_trace` | Execution flow from entrypoints | Debugging call chains |
-| `mcp_milens_explain_relationship` | Shortest dependency path | Understanding connections |
-| `mcp_milens_get_type_hierarchy` | Class inheritance tree | Class exploration |
-| `mcp_milens_find_dead_code` | Unused exported symbols | Before major refactors |
-| `mcp_milens_status` | Index health: symbols, links, files, coverage | Session start |
-
-## Workflow
-
-**Every session follows this pattern:**
-
-1. **Start** — `mcp_milens_status` to verify the index is healthy.
-2. **Understand** — `mcp_milens_overview({name, repo})` for any symbol mentioned.
-3. **Edit safely** — `mcp_milens_edit_check` before touching hub/shared code. Halt if dependents > 5.
-4. **Verify** — `mcp_milens_detect_changes` before committing. Report unexpected changes.
-5. **Refresh** — `npx milens analyze -p . --force` after significant edits.
-
-## Mandatory Safety Rules
-
-- **Never edit** a symbol without `mcp_milens_edit_check` first.
-- **Never delete/rename** without `mcp_milens_grep` AND `mcp_milens_impact`.
-- **Never commit** without `mcp_milens_detect_changes`.
-- **Never omit** the `repo` parameter from milens calls.
-- **Use `mcp_milens_grep`** (not `mcp_milens_query`) for phrases, UI text, config strings.
-
-## Codebase Structure
-
-- `.agents/skills/milens/SKILL.md` — full milens documentation
-- `.agents/skills/` — area-specific skill files (analyzer, parser, server, store, etc.)
-- `AGENTS.md` — project-level instructions and conventions
+# Milens — Code Intelligence
+
+## ⚠️ BEFORE ANYTHING ELSE
+
+This project is indexed by **milens**. You have MCP tools that are faster and more accurate than reading files directly.
+
+**HARD RULE: Use milens tools BEFORE built-in search/read tools.**
+
+| Situation | Built-in approach (❌) | Milens approach (✅) |
+|---|---|---|
+| Understand a function | Read 3-10 files | `mcp_milens_overview({name: "X"})` — 1 call |
+| Find references | grep in files | `mcp_milens_grep({pattern: "X"})` — searches everything |
+| Check edit safety | Hope nothing breaks | `mcp_milens_impact({target: "X"})` — exact blast radius |
+| Start working | Read README, explore files | `mcp_milens_codebase_summary()` — 500 token overview |
+| Before commit | `git diff` manually | `mcp_milens_detect_changes()` — symbols + risk scores |
+
+**If you skip milens tools, you're wasting tokens and risking breaking changes.**
+
+## MCP Connection
+
+```json
+{
+  "mcpServers": {
+    "milens": {
+      "command": "milens",
+      "args": ["serve", "-p", "${workspaceFolder}"],
+      "env": { "MILENS_PROFILE": "standard" }
+    }
+  }
+}
+```
+
+All milens MCP calls require the `repo` parameter set to the absolute workspace root.
+
+## ⭐ Core Tools (Use Every Session)
+
+| Tool | Description |
+|---|---|
+| `mcp_milens_overview` | **Use this first.** Context + impact + grep combined. 1 call replaces 3-5 file reads. |
+| `mcp_milens_impact` | Blast radius BEFORE editing. Shows what WILL BREAK. |
+| `mcp_milens_edit_check` | Pre-edit safety: callers, export status, re-export chains, test coverage |
+| `mcp_milens_context` | Full incoming + outgoing dependency view |
+| `mcp_milens_query` | Symbol search by name |
+| `mcp_milens_grep` | Text search everywhere (templates, configs, docs, styles) |
+| `mcp_milens_detect_changes` | Pre-commit: changed symbols + dependents + risk scores |
+| `mcp_milens_codebase_summary` | 500-token project overview. Use instead of reading README. |
+
+### 🔧 Situational Tools (Use When Needed)
+
+| Tool | Description | Use when... |
+|---|---|---|
+| `mcp_milens_guard_edit_check` | Hard pre-edit gate with audit tracking | Before every edit |
+| `mcp_milens_trace` | Execution flow from entrypoints | Debugging call chains |
+| `mcp_milens_explain_relationship` | Shortest dependency path | Understanding connections |
+| `mcp_milens_get_type_hierarchy` | Class inheritance tree | Class exploration |
+| `mcp_milens_find_dead_code` | Unused exported symbols | Before major refactors |
+| `mcp_milens_status` | Index health: symbols, links, files, coverage | Session start |
+
+## Workflow
+
+**Every session follows this pattern:**
+
+1. **Start** — `mcp_milens_status` to verify the index is healthy.
+2. **Understand** — `mcp_milens_overview({name, repo})` for any symbol mentioned.
+3. **Edit safely** — `mcp_milens_edit_check` before touching hub/shared code. Halt if dependents > 5.
+4. **Verify** — `mcp_milens_detect_changes` before committing. Report unexpected changes.
+5. **Refresh** — `npx milens analyze -p . --force` after significant edits.
+
+## Mandatory Safety Rules
+
+- **Never edit** a symbol without `mcp_milens_edit_check` first.
+- **Never delete/rename** without `mcp_milens_grep` AND `mcp_milens_impact`.
+- **Never commit** without `mcp_milens_detect_changes`.
+- **Never omit** the `repo` parameter from milens calls.
+- **Use `mcp_milens_grep`** (not `mcp_milens_query`) for phrases, UI text, config strings.
+
+## Codebase Structure
+
+- `.agents/skills/milens/SKILL.md` — full milens documentation
+- `.agents/skills/` — area-specific skill files (analyzer, parser, server, store, etc.)
+- `AGENTS.md` — project-level instructions and conventions

package/adapters/opencode/.opencode/config.json

@@ -1,8 +1,8 @@
-{
-  "mcp": {
-    "milens": {
-      "type": "local",
-      "command": ["milens", "serve", "-p", "."]
-    }
-  }
-}
+{
+  "mcp": {
+    "milens": {
+      "type": "local",
+      "command": ["milens", "serve", "-p", "."]
+    }
+  }
+}

package/adapters/zed/.zed/settings.json

@@ -1,8 +1,8 @@
-{
-  "context_servers": {
-    "milens": {
-      "command": "milens serve -p .",
-      "env": { "MILENS_PROFILE": "minimal" }
-    }
-  }
-}
+{
+  "context_servers": {
+    "milens": {
+      "command": "milens serve -p .",
+      "env": { "MILENS_PROFILE": "minimal" }
+    }
+  }
+}

package/dist/cli.js

@@ -1186,7 +1186,7 @@ program
         console.log('Choose a profile:');
         console.log('  1. minimal  — Core tools only (10 tools, ~500 token overhead)');
         console.log('  2. standard — Full vibe coding toolkit (25 tools) [Recommended]');
-        console.log('  3. full     — Everything including experimental features (33 tools)');
+        console.log('  3. full     — Everything including experimental features (43 tools)');
         const profileChoice = await ask('\nProfile [2]: ');
         const profileMap = { '1': 'minimal', '2': 'standard', '3': 'full', '': 'standard' };
         opts.profile = profileMap[profileChoice.trim()] || 'standard';

package/dist/server/hooks.d.ts.map

@@ -1 +1 @@
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+{"version":3,"file":"hooks.d.ts","sourceRoot":"","sources":["../../src/server/hooks.ts"],"names":[],"mappings":"AAIA,MAAM,WAAW,UAAU;IACzB,OAAO,EAAE,OAAO,CAAC;IACjB,cAAc,EAAE,OAAO,CAAC;IACxB,YAAY,EAAE,OAAO,CAAC;IACtB,YAAY,EAAE,OAAO,CAAC;IACtB,WAAW,EAAE,OAAO,CAAC;IACrB,YAAY,EAAE,OAAO,CAAC;IACtB,aAAa,EAAE,OAAO,CAAC;CACxB;AAED,MAAM,WAAW,cAAc;IAC7B,KAAK,EAAE,MAAM,CAAC;IACd,SAAS,EAAE,MAAM,CAAC;IAClB,QAAQ,EAAE,MAAM,CAAC;CAClB;AAwBD,qBAAa,WAAW;IACtB,MAAM,CAAC,iBAAiB,IAAI,MAAM;IAIlC,oBAAoB,CAAC,WAAW,EAAE,MAAM,GAAG,MAAM;IAIjD,UAAU,CAAC,WAAW,CAAC,EAAE,MAAM,GAAG,UAAU;IAoB5C,UAAU,CAAC,MAAM,EAAE,UAAU,EAAE,WAAW,CAAC,EAAE,MAAM,GAAG,IAAI;IAS1D,UAAU,CAAC,QAAQ,EAAE,MAAM,EAAE,WAAW,CAAC,EAAE,MAAM,GAAG,IAAI;IASxD,WAAW,CAAC,QAAQ,EAAE,MAAM,EAAE,WAAW,CAAC,EAAE,MAAM,GAAG,IAAI;CAQ1D;AAED,wBAAsB,qBAAqB,CAAC,GAAG,EAAE,cAAc,EAAE,MAAM,EAAE,MAAM,GAAG,OAAO,CAAC,MAAM,CAAC,CAwEhG;AAED,wBAAsB,mBAAmB,CAAC,GAAG,EAAE,cAAc,EAAE,MAAM,EAAE,MAAM,GAAG,OAAO,CAAC,MAAM,CAAC,CA6D9F;AAED,wBAAsB,kBAAkB,CAAC,QAAQ,EAAE,MAAM,GAAG,OAAO,CAAC,MAAM,CAAC,CAoF1E;AAED,wBAAsB,mBAAmB,CAAC,KAAK,EAAE,MAAM,EAAE,EAAE,QAAQ,EAAE,MAAM,GAAG,OAAO,CAAC,MAAM,CAAC,CAyB5F;AAED,wBAAsB,mBAAmB,CAAC,QAAQ,EAAE,MAAM,EAAE,MAAM,EAAE,MAAM,GAAG,OAAO,CAAC,MAAM,CAAC,CAgB3F;AAED,wBAAsB,oBAAoB,CAAC,QAAQ,EAAE,MAAM,GAAG,OAAO,CAAC,MAAM,CAAC,CA4B5E"}

package/dist/server/hooks.js

@@ -120,6 +120,16 @@ export async function defaultOnSessionStart(ctx, dbPath) {
         lines.push('*(annotations unavailable)*');
         lines.push('');
     }
+    try {
+        const { generateCrossRefSection } = await import('../agents-md.js');
+        const crossRef = generateCrossRefSection(ctx.rootPath);
+        if (crossRef) {
+            lines.push(crossRef);
+        }
+    }
+    catch {
+        // no cross-ref config — skip silently
+    }
     db.close();
     return lines.join('\n');
 }

package/dist/server/hooks.js.map

@@ -1 +1 @@
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package/dist/skills.js

@@ -348,7 +348,7 @@ When the user says... → do this FIRST:
 | "compare impact of \`X\`" | \`${t('compare_impact')}({name: "X", action: "snapshot"|"compare", repo: "<workspaceRoot>"})\` |
 | "check pre-commit" | \`${t('pre_commit_check')}({repo: "<workspaceRoot>"})\` |
 | "save/restore context" | \`${t('hook_preCompact')}()\` / \`${t('hook_postCompact')}()\` |
-| "scan security / audit security" | \`${t('security_scan')}({repo: "<workspaceRoot>"})\` — full audit across all 50+ rules |
+| "scan security / audit security" | \`${t('security_scan')}({repo: "<workspaceRoot>"})\` — full audit across all 190 rules |
 | "end session" / "finish work" | \`${t('session_end')}({session_id: "..."})\` — record stats, trigger onSessionEnd hook |
 | "what did session X do" | \`${t('session_context')}({session_id: "..."})\` — get annotations + tool calls |
 | "file changed to X" | \`${t('hook_onFileChange')}({files: ["path/to/file"], repo: "<workspaceRoot>"})\` |
@@ -420,7 +420,7 @@ Every time you discover something important about a symbol, annotate it. The sys
 | Find what needs testing most | \`${t('test_coverage_gaps')}()\` — sorted by risk |
 | Get a test strategy | \`${t('test_plan')}({name: "functionName"})\` — mocks + scenarios |
 | Review your changes | \`${t('review_pr')}()\` — risk scores for changed symbols |
-| Check for security issues | \`${t('security_scan')}()\` — 50+ rules in one call |
+| Check for security issues | \`${t('security_scan')}()\` — 190 rules in one call |
 | Remove dead code safely | \`${t('find_dead_code')}()\` then use \`dead_code_remove\` prompt |
 | Trace how code executes | \`${t('trace')}({name: "functionName", direction: "to"})\` |
 | Find API endpoints | \`${t('routes')}()\` — auto-detect across 7 frameworks |
@@ -497,7 +497,7 @@ Milens indexes **Markdown files** (.md, .mdx) — headings become \`section\` sy
 | \`${t('test_coverage_gaps')}\` | Untested symbols sorted by risk | Finding test priorities |
 | \`${t('test_impact')}\` | Maps changes → test files | After making edits |
 | \`${t('test_generate')}\` | Auto-generate test file | Starting tests from scratch |
-| \`${t('security_scan')}\` | 50+ security rules | Security audit requested |
+| \`${t('security_scan')}\` | 190 security rules | Security audit requested |
 | \`${t('trace')}\` | Call chains from entrypoints | Debugging execution flow |
 | \`${t('routes')}\` | Framework routes/endpoints | Finding API endpoints |
 | \`${t('smart_context')}\` | Intent-aware context | Understand/edit/debug/test modes |

package/dist/store/db.d.ts.map

@@ -1 +1 @@
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package/dist/store/db.js

@@ -74,7 +74,7 @@ export class Database {
       `),
             countSymbols: this.db.prepare('SELECT COUNT(*) as c FROM symbols'),
             countLinks: this.db.prepare('SELECT COUNT(*) as c FROM links'),
-            countFiles: this.db.prepare('SELECT COUNT(*) as c FROM file_hashes'),
+            countFiles: this.db.prepare('SELECT COUNT(DISTINCT file_path) as c FROM symbols'),
             deleteFileLinks: this.db.prepare('DELETE FROM links WHERE from_id IN (SELECT id FROM symbols WHERE file_path = ?)'),
             deleteFileSymbols: this.db.prepare('DELETE FROM symbols WHERE file_path = ?'),
             topHubs: this.db.prepare('SELECT * FROM symbols WHERE exported = 1 ORDER BY heat DESC LIMIT ?'),
@@ -479,7 +479,6 @@ export class Database {
     clear() {
         this.db.exec('DELETE FROM symbols');
         this.db.exec('DELETE FROM links');
-        this.db.exec('DELETE FROM file_hashes');
     }
     /** Clear only symbols, links, and file hashes for specific files (incremental re-index) */
     clearFiles(filePaths) {
@@ -495,9 +494,6 @@ export class Database {
     `).run(...filePaths);
         this.db.prepare(`
       DELETE FROM symbols WHERE file_path IN (${placeholders})
-    `).run(...filePaths);
-        this.db.prepare(`
-      DELETE FROM file_hashes WHERE path IN (${placeholders})
     `).run(...filePaths);
     }
     // ── Tool usage tracking ──