daftari 1.7.1 → 1.9.0

package/dist/search/embedding-provider.js.map

@@ -0,0 +1 @@
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package/dist/search/hybrid.d.ts.map

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package/dist/search/hybrid.js

@@ -1,19 +1,35 @@
-// Hybrid search: combine BM25 lexical ranking with vector semantic ranking.
+// Hybrid search: combine FTS5 lexical ranking with sqlite-vec semantic
+// ranking.
 //
-// Each ranker produces raw scores on its own scale, so both are min-normalised
-// to [0, 1] (divide by the top score) before being mixed by weight. Default
-// weighting is an even 0.5 / 0.5 split.
+// Both halves are now SQL-native:
+//   - The lexical half runs an FTS5 MATCH query over `documents_fts` and
+//     reads SQLite's built-in BM25 score.
+//   - The vector half runs a KNN query over the sqlite-vec `embeddings_vec`
+//     virtual table, joining back to `chunks` to map content hashes onto
+//     document paths.
+//
+// Each ranker still produces raw scores on its own scale, so both are
+// min-normalised to [0, 1] (divide by the top score) before being mixed by
+// weight. Default weighting is an even 0.5 / 0.5 split.
 //
 // Vector ranking is best-effort. If the query cannot be embedded (model
 // unavailable) or the index holds no embeddings, the search degrades to
 // lexical-only and reports vectorUsed: false rather than failing.
 import { computeDecay } from "../curation/decay.js";
 import { ok } from "../frontmatter/types.js";
-import { getAllChunks, getAllDocuments, getChunksForPath, getDocument, } from "../storage/index-db.js";
-import { buildBm25, searchBm25, tokenize } from "./bm25.js";
-import { cosineSimilarity, embedQuery, meanEmbedding } from "./vector.js";
+import { embeddingToBlob, getAllDocuments, getChunksForPath, getDocument, } from "../storage/index-db.js";
+import { buildMatchQuery, tokenize } from "./bm25.js";
+import { embedQuery, getProvider, meanEmbedding } from "./vector.js";
 export const DEFAULT_WEIGHTS = { bm25: 0.5, vector: 0.5 };
 const SNIPPET_RADIUS = 140;
+// How many KNN neighbours to ask sqlite-vec for. The vec table is per-chunk,
+// not per-document, so this is the chunk fan-out we will then collapse to
+// best-per-document. A multiple of the user-facing limit keeps the hybrid
+// fusion honest — if we only fetched `limit` chunks we'd risk every one
+// belonging to the same document and starving the rest of the candidate set.
+// 64 is empirically generous for typical limit ≤ 10; bump if vault chunk
+// counts grow into the millions.
+const VEC_KNN_K = 64;
 // Pulls a readable excerpt from a document body, centred on the earliest
 // occurrence of any query term. Falls back to the document head when no term
 // is found (e.g. a purely semantic match).
@@ -53,29 +69,73 @@ function normalize(scores) {
         return new Map([...scores].map(([k]) => [k, 0]));
     return new Map([...scores].map(([k, v]) => [k, v / max]));
 }
-// Core ranker shared by query search and related-document search. queryTokens
-// drives BM25; queryEmbedding (when present) drives vector similarity against
-// every embedded chunk, taking each document's best-matching chunk.
-function rankDocuments(db, queryTokens, queryEmbedding, opts) {
+// Runs an FTS5 MATCH against `documents_fts` and returns a path → score
+// map. The FTS5 `bm25()` function is INVERSE (smaller = better, can be
+// negative for strong hits), so we flip the sign to `larger = better` and
+// then normalise the largest to 1.0 in the caller. A null query (no usable
+// tokens after sanitization) returns an empty map.
+function ftsRanking(db, query) {
+    if (query === null)
+        return new Map();
+    const rows = db
+        .prepare(`SELECT d.path AS path, -bm25(documents_fts) AS score
+         FROM documents_fts
+         JOIN documents AS d ON d.rowid = documents_fts.rowid
+        WHERE documents_fts MATCH ?
+        ORDER BY bm25(documents_fts)`)
+        .all(query);
+    const result = new Map();
+    for (const r of rows) {
+        // Some rows may produce a negative flipped score if FTS5 returned a
+        // positive bm25 (rare with prefix matches); shift to ensure the
+        // normalize step sees only non-negative values.
+        if (r.score > 0)
+            result.set(r.path, r.score);
+    }
+    return result;
+}
+// Runs a KNN query against the sqlite-vec `embeddings_vec` mirror, joins
+// against `chunks` to map content hashes onto document paths, and returns a
+// path → best-similarity map. sqlite-vec returns a cosine *distance*
+// (smaller = closer), so similarity is `1 - distance` clamped to [0, 1].
+// We keep each document's best-matching chunk.
+function vecRanking(db, queryEmbedding, modelId) {
+    const queryBlob = embeddingToBlob(queryEmbedding);
+    const rows = db
+        .prepare(`SELECT c.path AS path, v.distance AS distance
+         FROM embeddings_vec AS v
+         JOIN chunks AS c ON c.content_hash = v.content_hash
+        WHERE v.embedding MATCH ?
+          AND v.model = ?
+          AND v.k = ?
+        ORDER BY v.distance`)
+        .all(queryBlob, modelId, VEC_KNN_K);
+    const result = new Map();
+    for (const r of rows) {
+        const sim = Math.max(0, 1 - r.distance);
+        const prev = result.get(r.path) ?? -Infinity;
+        if (sim > prev)
+            result.set(r.path, sim);
+    }
+    return result;
+}
+// Core ranker shared by query search and related-document search.
+// `matchQuery` is the FTS5 MATCH string (already prefix-OR'd, or null);
+// `queryEmbedding` (when present) drives sqlite-vec KNN against every
+// indexed chunk, keeping each document's best-matching chunk.
+// `queryTokensForSnippet` is used purely to centre snippets on the first
+// matching term — it doesn't drive ranking.
+function rankDocuments(db, matchQuery, queryEmbedding, queryTokensForSnippet, opts) {
     const documents = getAllDocuments(db);
     const byPath = new Map(documents.map((d) => [d.path, d]));
-    const bm25Model = buildBm25(documents.map((d) => ({ path: d.path, tokens: d.tokens })));
-    const bm25Raw = new Map();
-    for (const hit of searchBm25(bm25Model, queryTokens)) {
-        bm25Raw.set(hit.path, hit.score);
-    }
-    const vectorRaw = new Map();
+    const bm25Raw = ftsRanking(db, matchQuery);
+    let vectorRaw = new Map();
     let vectorUsed = false;
     if (queryEmbedding) {
-        for (const chunk of getAllChunks(db)) {
-            if (!chunk.embedding)
-                continue;
+        const provider = getProvider();
+        vectorRaw = vecRanking(db, queryEmbedding, provider.id);
+        if (vectorRaw.size > 0)
             vectorUsed = true;
-            const sim = cosineSimilarity(queryEmbedding, chunk.embedding);
-            const prev = vectorRaw.get(chunk.path) ?? -Infinity;
-            if (sim > prev)
-                vectorRaw.set(chunk.path, sim);
-        }
     }
     const bm25Norm = normalize(bm25Raw);
     const vectorNorm = normalize(vectorRaw);
@@ -102,7 +162,7 @@ function rankDocuments(db, queryTokens, queryEmbedding, opts) {
             score,
             bm25Score,
             vectorScore,
-            snippet: makeSnippet(doc.content, queryTokens),
+            snippet: makeSnippet(doc.content, queryTokensForSnippet),
             decay: computeDecay({
                 status: doc.status,
                 confidence: doc.confidence,
@@ -120,10 +180,11 @@ function rankDocuments(db, queryTokens, queryEmbedding, opts) {
 export async function hybridSearch(db, query, options = {}) {
     const weights = options.weights ?? DEFAULT_WEIGHTS;
     const limit = options.limit ?? 10;
-    const queryTokens = tokenize(query);
+    const matchQuery = buildMatchQuery(query);
+    const snippetTokens = tokenize(query);
     const embedResult = await embedQuery(query);
     const queryEmbedding = embedResult.ok ? embedResult.value : null;
-    const { hits, vectorUsed } = rankDocuments(db, queryTokens, queryEmbedding, {
+    const { hits, vectorUsed } = rankDocuments(db, matchQuery, queryEmbedding, snippetTokens, {
         weights,
         limit,
         excludePath: undefined,
@@ -137,10 +198,10 @@ export async function hybridSearch(db, query, options = {}) {
     });
 }
 // Finds documents related to an already-indexed document. The source document
-// itself is the query: its BM25 tokens drive lexical similarity and the mean
-// of its chunk embeddings drives semantic similarity. The source is excluded
-// from its own results. Needs no embedding model — it reuses vectors already
-// stored in the index.
+// itself is the query: its tokens drive an FTS5 MATCH for lexical
+// similarity, and the mean of its chunk embeddings drives semantic
+// similarity via sqlite-vec. The source is excluded from its own results.
+// Needs no embedding model — it reuses vectors already stored in the index.
 export function relatedSearch(db, path, options = {}) {
     const weights = options.weights ?? DEFAULT_WEIGHTS;
     const limit = options.limit ?? 10;
@@ -151,11 +212,22 @@ export function relatedSearch(db, path, options = {}) {
             error: new Error(`document not indexed: ${path} (try vault_reindex)`),
         };
     }
-    const chunkVectors = getChunksForPath(db, path)
+    const provider = getProvider();
+    const chunkVectors = getChunksForPath(db, path, provider.id, provider.dim)
         .map((c) => c.embedding)
         .filter((e) => e !== null);
     const queryEmbedding = meanEmbedding(chunkVectors);
-    const { hits, vectorUsed } = rankDocuments(db, doc.tokens, queryEmbedding, {
+    // Build the FTS5 match string from the source document's stored token
+    // list (title + tags + body, tokenized at index time). Cap the token
+    // count: a long document's full token list produces a MATCH string that
+    // is mostly noise and forces FTS5 to do enormous work. The most
+    // informative terms are typically the rarer ones, but since we don't
+    // have IDF readily available here we use a simple truncate to the first
+    // N unique tokens — title + early body — which is the same heuristic the
+    // hand-rolled BM25 implicitly used.
+    const sourceTokens = [...new Set(doc.tokens)].slice(0, 64);
+    const matchQuery = sourceTokens.length === 0 ? null : sourceTokens.map((t) => `${t}*`).join(" OR ");
+    const { hits, vectorUsed } = rankDocuments(db, matchQuery, queryEmbedding, doc.tokens, {
         weights,
         limit,
         excludePath: path,

package/dist/search/hybrid.js.map

@@ -1 +1 @@
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package/dist/search/index-state.d.ts

@@ -1,4 +1,5 @@
 export type IndexStatus = "ready" | "indexing" | "error";
+export type ModelStatus = "cold" | "warming" | "ready" | "error";
 export interface IndexSnapshot {
     status: IndexStatus;
     done: number;
@@ -6,12 +7,21 @@ export interface IndexSnapshot {
     error: string | null;
     startedAt: string | null;
     finishedAt: string | null;
+    modelStatus: ModelStatus;
+    modelError: string | null;
 }
 export declare function getIndexStatus(): IndexSnapshot;
 export declare function markIndexing(): void;
 export declare function setIndexProgress(done: number, total: number): void;
 export declare function markIndexReady(): void;
 export declare function markIndexError(message: string): void;
+export declare function markModelWarming(): void;
+export declare function markModelReady(): void;
+export declare function markModelError(message: string): void;
 export declare function resetIndexState(): void;
+export declare function markPathIndexing(relPath: string): void;
+export declare function markPathReady(relPath: string): void;
+export declare function isPathIndexing(relPath: string): boolean;
+export declare function getInflightPaths(): string[];
 export declare function indexingBusyMessage(snapshot: IndexSnapshot): string;
 //# sourceMappingURL=index-state.d.ts.map

package/dist/search/index-state.d.ts.map

@@ -1 +1 @@
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package/dist/search/index-state.js

@@ -6,6 +6,14 @@
 // they consult this module to decide whether to serve or to reply "still
 // indexing — N/M chunks". A single in-process snapshot is enough because the
 // server is one Node process per vault.
+//
+// Embedding model load is tracked separately from indexing because the two
+// are orthogonal: a fully-cached reindex (every chunk hash already has an
+// embedding row) never loads the model at all, while a search may need to
+// load the model even when the index is "ready". The `modelStatus` lets a
+// tool report "embeddings warming" instead of misleading a client with a
+// generic indexing message when the slow operation is actually the model
+// load.
 function freshState() {
     return {
         status: "ready",
@@ -14,6 +22,8 @@ function freshState() {
         error: null,
         startedAt: null,
         finishedAt: null,
+        modelStatus: "cold",
+        modelError: null,
     };
 }
 let state = freshState();
@@ -22,6 +32,7 @@ export function getIndexStatus() {
 }
 export function markIndexing() {
     state = {
+        ...state,
         status: "indexing",
         done: 0,
         total: 0,
@@ -51,17 +62,61 @@ export function markIndexError(message) {
         finishedAt: new Date().toISOString(),
     };
 }
+// Model lifecycle transitions. Called by vector.ts as the memoised
+// extractor promise progresses; the warm-up entry point and the lazy
+// first-embed path both flow through the same getExtractor() so callers
+// here do not need to special-case the trigger.
+export function markModelWarming() {
+    state = { ...state, modelStatus: "warming", modelError: null };
+}
+export function markModelReady() {
+    state = { ...state, modelStatus: "ready", modelError: null };
+}
+export function markModelError(message) {
+    state = { ...state, modelStatus: "error", modelError: message };
+}
 // Tests load tools without running main(); resetting the singleton between
 // suites keeps cross-test pollution out of the state machine.
 export function resetIndexState() {
     state = freshState();
+    inflightPaths.clear();
+}
+// Per-path "currently indexing this one file" tracker. The global `status`
+// above describes whole-vault reindex passes (startup / vault_reindex). The
+// fs.watch path drives many concurrent per-file re-indexes that must not
+// block unrelated writes or searches; their in-flight membership lives here.
+// Membership is advisory: searches that read a slightly-stale row for a few
+// hundred ms while a per-file index is mid-write is acceptable. The
+// per-path *serialisation* between an external edit and a Daftari write is
+// the file-level write lock in src/access/locks.ts.
+const inflightPaths = new Set();
+export function markPathIndexing(relPath) {
+    inflightPaths.add(relPath);
+}
+export function markPathReady(relPath) {
+    inflightPaths.delete(relPath);
+}
+export function isPathIndexing(relPath) {
+    return inflightPaths.has(relPath);
+}
+export function getInflightPaths() {
+    return [...inflightPaths];
 }
 // Formatted message tools return to clients while indexing is in progress.
 // One place so the phrasing is consistent across vault_search, vault_write,
-// vault_reindex, etc.
+// vault_reindex, etc. When the model is warming and the index is otherwise
+// ready, the message says so explicitly — the slow operation is the model
+// load, not an indexing pass, and a client that retries blindly against an
+// "indexing" message is missing useful context.
 export function indexingBusyMessage(snapshot) {
-    if (snapshot.total > 0) {
-        return `vault is still indexing (${snapshot.done}/${snapshot.total} chunks) — try again shortly`;
+    if (snapshot.status === "indexing") {
+        if (snapshot.total > 0) {
+            return `vault is still indexing (${snapshot.done}/${snapshot.total} chunks) — try again shortly`;
+        }
+        return `vault is still indexing — try again shortly`;
+    }
+    if (snapshot.modelStatus === "warming") {
+        return `embedding model is warming — try again shortly`;
     }
     return `vault is still indexing — try again shortly`;
 }

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package/dist/search/providers/local-minilm.d.ts

@@ -0,0 +1,7 @@
+import type { EmbeddingProvider } from "../embedding-provider.js";
+export declare const LOCAL_MINILM_ID = "local-minilm";
+export declare const LOCAL_MINILM_DIM = 384;
+export declare function isLocalMinilmLoaded(): boolean;
+export declare function resetLocalMinilmForTests(): void;
+export declare const localMinilmProvider: EmbeddingProvider;
+//# sourceMappingURL=local-minilm.d.ts.map

package/dist/search/providers/local-minilm.d.ts.map

@@ -0,0 +1 @@
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package/dist/search/providers/local-minilm.js

@@ -0,0 +1,114 @@
+// local-minilm — sentence-transformers/all-MiniLM-L6-v2 run locally via
+// @huggingface/transformers. 384 dims, fully local, no network at query time
+// once the model is cached. The default embedding provider.
+//
+// The model loads lazily and is memoised for the process; the first call pays
+// a ~500ms-to-multi-second cold start (model file download on first run,
+// CPU init thereafter). A warm-up entry point exists so the server can pay
+// that cost in the background after startup rather than on the first user
+// search. Failures (no network on first run, model download blocked) come
+// back as Result.err so the caller can degrade to BM25-only — embedding is
+// never load-bearing for the server staying up.
+import { err, ok } from "../../frontmatter/types.js";
+import { markModelError, markModelReady, markModelWarming } from "../index-state.js";
+export const LOCAL_MINILM_ID = "local-minilm";
+export const LOCAL_MINILM_DIM = 384;
+const HF_MODEL = "Xenova/all-MiniLM-L6-v2";
+// Texts are embedded in fixed-size sub-batches rather than one call. The model
+// pads every batch to its longest sequence and allocates activation tensors
+// proportional to the batch size, so an unbounded batch makes peak memory
+// scale with the whole vault — a few hundred documents is enough to exhaust
+// RAM and stall in a GC death spiral. A small fixed batch keeps peak memory
+// flat regardless of vault size.
+//
+// 8 was measured as the sweet spot: on CPU inference larger batches were both
+// heavier (more activation memory) and slower (more compute wasted padding
+// short chunks up to the batch's longest sequence), not faster.
+const EMBED_BATCH_SIZE = 8;
+let extractorPromise = null;
+async function getExtractor() {
+    if (!extractorPromise) {
+        // The model is being loaded for the first time. Surface that in the
+        // process-wide IndexState so tools can tell a "warming embeddings" pause
+        // apart from a real indexing pass. The state is best-effort signal — we
+        // never let a state-machine wobble break embedding.
+        markModelWarming();
+        extractorPromise = import("@huggingface/transformers").then(({ pipeline }) => pipeline("feature-extraction", HF_MODEL)).then((extractor) => {
+            markModelReady();
+            return extractor;
+        }, (e) => {
+            // Surface the failure but reset the cached promise so the next call
+            // can try again — useful for the no-network-on-first-run case where
+            // a later retry might succeed. Without the reset a single transient
+            // failure would poison the process for its whole lifetime.
+            const reason = e instanceof Error ? e.message : String(e);
+            markModelError(reason);
+            extractorPromise = null;
+            throw e;
+        });
+    }
+    return extractorPromise;
+}
+// Returns true once the model has been loaded into memory (the memoised
+// promise has resolved). Used by tests and by lazy-load coverage to assert
+// that startup paths do not invoke the model when they should not.
+export function isLocalMinilmLoaded() {
+    return extractorPromise !== null;
+}
+// Test-only: clear the memoised extractor so a fresh import is forced on
+// the next call. Production code must not invoke this — the model load is
+// expensive and the whole point of the memo is that it survives the process.
+export function resetLocalMinilmForTests() {
+    extractorPromise = null;
+}
+async function warm() {
+    try {
+        await getExtractor();
+        return ok(undefined);
+    }
+    catch (e) {
+        const reason = e instanceof Error ? e.message : String(e);
+        return err(new Error(`embedding model warm-up failed: ${reason}`));
+    }
+}
+async function embed(texts, onProgress) {
+    if (texts.length === 0)
+        return ok([]);
+    try {
+        const extractor = await getExtractor();
+        const vectors = [];
+        for (let start = 0; start < texts.length; start += EMBED_BATCH_SIZE) {
+            const batch = texts.slice(start, start + EMBED_BATCH_SIZE);
+            const output = await extractor(batch, {
+                pooling: "mean",
+                normalize: true,
+            });
+            const dim = output.dims[output.dims.length - 1] ?? LOCAL_MINILM_DIM;
+            for (let i = 0; i < batch.length; i++) {
+                vectors.push(output.data.slice(i * dim, (i + 1) * dim));
+            }
+            // Progress is a best-effort side channel: a failing reporter (e.g. a
+            // closed stderr pipe) must never abort embedding the vault.
+            if (onProgress) {
+                try {
+                    onProgress(vectors.length, texts.length);
+                }
+                catch {
+                    // ignore — progress reporting is not load-bearing
+                }
+            }
+        }
+        return ok(vectors);
+    }
+    catch (e) {
+        const reason = e instanceof Error ? e.message : String(e);
+        return err(new Error(`embedding failed: ${reason}`));
+    }
+}
+export const localMinilmProvider = {
+    id: LOCAL_MINILM_ID,
+    dim: LOCAL_MINILM_DIM,
+    warm,
+    embed,
+};
+//# sourceMappingURL=local-minilm.js.map

package/dist/search/providers/local-minilm.js.map

@@ -0,0 +1 @@
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package/dist/search/providers/openai-3-small.d.ts

@@ -0,0 +1,5 @@
+import type { EmbeddingProvider } from "../embedding-provider.js";
+export declare const OPENAI_3_SMALL_ID = "openai-3-small";
+export declare const OPENAI_3_SMALL_DIM = 1536;
+export declare function makeOpenAi3SmallProvider(apiKey: string): EmbeddingProvider;
+//# sourceMappingURL=openai-3-small.d.ts.map

package/dist/search/providers/openai-3-small.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"openai-3-small.d.ts","sourceRoot":"","sources":["../../../src/search/providers/openai-3-small.ts"],"names":[],"mappings":"AAwBA,OAAO,KAAK,EAAE,iBAAiB,EAAE,MAAM,0BAA0B,CAAC;AAElE,eAAO,MAAM,iBAAiB,mBAAmB,CAAC;AAClD,eAAO,MAAM,kBAAkB,OAAO,CAAC;AAoIvC,wBAAgB,wBAAwB,CAAC,MAAM,EAAE,MAAM,GAAG,iBAAiB,CAgC1E"}