daftari 1.15.0 → 1.17.0

package/dist/index.js

@@ -17,6 +17,7 @@ import { resolve } from "node:path";
 import { pathToFileURL } from "node:url";
 import { StdioServerTransport } from "@modelcontextprotocol/sdk/server/stdio.js";
 import { GUEST_ROLE, resolveAccess } from "./access/rbac.js";
+import { materializeStagedActions } from "./curation/staged-actions.js";
 import { acquireLock, releaseLock } from "./lifecycle/lock.js";
 import { markIndexError, markIndexing, markIndexReady, setIndexProgress, } from "./search/index-state.js";
 import { isIndexFresh, reindexVault } from "./search/reindex.js";
@@ -27,7 +28,7 @@ import { directoryExists } from "./storage/local.js";
 import { loadConfig } from "./utils/config.js";
 // Kept in sync with package.json. Surfaced in the process lockfile for
 // operator diagnostics. Bump both together on a release.
-const DAFTARI_VERSION = "1.10.0";
+const DAFTARI_VERSION = "1.17.0";
 // Reads `--name value` or `--name=value` from argv; null if absent.
 export function parseFlag(argv, name) {
     const flag = `--${name}`;
@@ -135,6 +136,15 @@ export async function main(argv = process.argv.slice(2)) {
     if (fresh) {
         process.stderr.write(`daftari: index is up to date — skipping reindex\n`);
         markIndexReady();
+        // A fresh index skips the reindex that would otherwise rebuild the
+        // staged-actions table from its jsonl, so do that one cheap step here:
+        // the queue may have grown since the last reindex without any file
+        // changing. Best-effort — the jsonl is the source of truth, and v1 read
+        // paths use it directly — so a failure is logged, not fatal.
+        const materialized = materializeStagedActions(vaultRoot);
+        if (!materialized.ok) {
+            process.stderr.write(`daftari: warning: could not rebuild staged-actions index: ${materialized.error.message}\n`);
+        }
         // Fresh index means a fully-cached state: no embedding work was done, so
         // the model is still cold. Warm it in the background (if config allows)
         // so the first user search does not pay the ~500ms cold start. Then

package/dist/index.js.map

@@ -1 +1 @@
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package/dist/search/reindex.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"reindex.d.ts","sourceRoot":"","sources":["../../src/search/reindex.ts"],"names":[],"mappings":"AAqBA,OAAO,EAAW,KAAK,MAAM,EAAE,MAAM,yBAAyB,CAAC;AAmH/D,wBAAsB,YAAY,CAAC,SAAS,EAAE,MAAM,GAAG,OAAO,CAAC,OAAO,CAAC,CActE;AAED,MAAM,WAAW,aAAa;IAC5B,aAAa,EAAE,MAAM,CAAC;IACtB,UAAU,EAAE,MAAM,CAAC;IACnB,aAAa,EAAE,OAAO,CAAC;IACvB,OAAO,EAAE,MAAM,EAAE,CAAC;IAClB,SAAS,EAAE,MAAM,CAAC;IAIlB,aAAa,EAAE,MAAM,CAAC;IACtB,SAAS,EAAE,MAAM,CAAC;IAClB,cAAc,EAAE,MAAM,CAAC;CACxB;AAED,MAAM,WAAW,cAAc;IAM7B,UAAU,CAAC,EAAE,CAAC,IAAI,EAAE,MAAM,EAAE,KAAK,EAAE,MAAM,KAAK,IAAI,CAAC;CACpD;AA+FD,wBAAsB,YAAY,CAChC,SAAS,EAAE,MAAM,EACjB,IAAI,GAAE,cAAmB,GACxB,OAAO,CAAC,MAAM,CAAC,aAAa,EAAE,KAAK,CAAC,CAAC,CA8GvC;AAED,MAAM,WAAW,mBAAmB;IAClC,UAAU,EAAE,MAAM,CAAC;IACnB,aAAa,EAAE,OAAO,CAAC;CACxB;AASD,wBAAsB,aAAa,CACjC,SAAS,EAAE,MAAM,EACjB,OAAO,EAAE,MAAM,GACd,OAAO,CAAC,MAAM,CAAC,mBAAmB,EAAE,KAAK,CAAC,CAAC,CAyG7C"}
+{"version":3,"file":"reindex.d.ts","sourceRoot":"","sources":["../../src/search/reindex.ts"],"names":[],"mappings":"AAsBA,OAAO,EAAW,KAAK,MAAM,EAAE,MAAM,yBAAyB,CAAC;AAmH/D,wBAAsB,YAAY,CAAC,SAAS,EAAE,MAAM,GAAG,OAAO,CAAC,OAAO,CAAC,CActE;AAED,MAAM,WAAW,aAAa;IAC5B,aAAa,EAAE,MAAM,CAAC;IACtB,UAAU,EAAE,MAAM,CAAC;IACnB,aAAa,EAAE,OAAO,CAAC;IACvB,OAAO,EAAE,MAAM,EAAE,CAAC;IAClB,SAAS,EAAE,MAAM,CAAC;IAIlB,aAAa,EAAE,MAAM,CAAC;IACtB,SAAS,EAAE,MAAM,CAAC;IAClB,cAAc,EAAE,MAAM,CAAC;CACxB;AAED,MAAM,WAAW,cAAc;IAM7B,UAAU,CAAC,EAAE,CAAC,IAAI,EAAE,MAAM,EAAE,KAAK,EAAE,MAAM,KAAK,IAAI,CAAC;CACpD;AA+FD,wBAAsB,YAAY,CAChC,SAAS,EAAE,MAAM,EACjB,IAAI,GAAE,cAAmB,GACxB,OAAO,CAAC,MAAM,CAAC,aAAa,EAAE,KAAK,CAAC,CAAC,CAoHvC;AAED,MAAM,WAAW,mBAAmB;IAClC,UAAU,EAAE,MAAM,CAAC;IACnB,aAAa,EAAE,OAAO,CAAC;CACxB;AASD,wBAAsB,aAAa,CACjC,SAAS,EAAE,MAAM,EACjB,OAAO,EAAE,MAAM,GACd,OAAO,CAAC,MAAM,CAAC,mBAAmB,EAAE,KAAK,CAAC,CAAC,CAyG7C"}

package/dist/search/reindex.js

@@ -17,6 +17,7 @@
 // inserted, so the join in vector.ts comes back null and search degrades to
 // lexical-only.
 import { stat } from "node:fs/promises";
+import { rebuildStagedActionsIndex } from "../curation/staged-actions.js";
 import { parseDocument } from "../frontmatter/parser.js";
 import { err, ok } from "../frontmatter/types.js";
 import { clearEmbeddingsVec, clearIndex, deleteDocument, documentCount, existingEmbeddingHashes, gcOrphanedEmbeddings, getMeta, insertChunkRow, insertDocument, insertEmbedding, insertEmbeddingVec, openIndexDb, setMeta, } from "../storage/index-db.js";
@@ -292,6 +293,11 @@ export async function reindexVault(vaultRoot, opts = {}) {
         }
         const chunkCount = writeChunkRows(db, staged);
         const orphansRemoved = gcOrphanedEmbeddings(db);
+        // Rebuild the staged-actions index from its canonical jsonl. Like every
+        // table here it is a derived cache of an on-disk source of truth; this
+        // keeps it in sync after a cold start or a manual index wipe. Best-effort:
+        // the staging queue lives in the jsonl, so a rebuild miss never loses data.
+        rebuildStagedActionsIndex(db, vaultRoot);
         // Rebuild the sqlite-vec mirror from the durable `embeddings` cache.
         // The cache is per-(model, content_hash) and is the source of truth;
         // the mirror is a SQL-queryable index of it. We rebuild rather than

package/dist/search/reindex.js.map

@@ -1 +1 @@
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package/dist/server.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"server.d.ts","sourceRoot":"","sources":["../src/server.ts"],"names":[],"mappings":"AAQA,OAAO,EAAE,MAAM,EAAE,MAAM,2CAA2C,CAAC;AAEnE,OAAO,EAAE,KAAK,aAAa,EAAe,MAAM,kBAAkB,CAAC;AAOnE,eAAO,MAAM,WAAW,YAAY,CAAC;AAQrC,eAAO,MAAM,cAAc,QAAmB,CAAC;AAK/C,wBAAgB,YAAY,CAAC,SAAS,EAAE,MAAM,EAAE,MAAM,GAAE,aAA6B,GAAG,MAAM,CA6D7F"}
+{"version":3,"file":"server.d.ts","sourceRoot":"","sources":["../src/server.ts"],"names":[],"mappings":"AAQA,OAAO,EAAE,MAAM,EAAE,MAAM,2CAA2C,CAAC;AAEnE,OAAO,EAAE,KAAK,aAAa,EAAe,MAAM,kBAAkB,CAAC;AAQnE,eAAO,MAAM,WAAW,YAAY,CAAC;AAQrC,eAAO,MAAM,cAAc,QAAmB,CAAC;AAK/C,wBAAgB,YAAY,CAAC,SAAS,EAAE,MAAM,EAAE,MAAM,GAAE,aAA6B,GAAG,MAAM,CA8D7F"}

package/dist/server.js

@@ -11,6 +11,7 @@ import { guestAccess } from "./access/rbac.js";
 import { curationTools } from "./tools/curation.js";
 import { readTools } from "./tools/read.js";
 import { searchTools } from "./tools/search.js";
+import { stagedActionTools } from "./tools/staged-actions.js";
 import { themesTools } from "./tools/themes.js";
 import { writeTools } from "./tools/write.js";
 export const SERVER_NAME = "daftari";
@@ -30,6 +31,7 @@ export function createServer(vaultRoot, access = guestAccess()) {
         ...themesTools,
         ...writeTools,
         ...curationTools,
+        ...stagedActionTools,
     ];
     const byName = new Map(tools.map((t) => [t.name, t]));
     server.setRequestHandler(ListToolsRequestSchema, async () => ({

package/dist/server.js.map

@@ -1 +1 @@
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package/dist/storage/index-db.d.ts

@@ -51,4 +51,23 @@ export declare function getMeta(db: IndexDb, key: string): string | null;
 export declare function documentCount(db: IndexDb): number;
 export declare function embeddingCount(db: IndexDb): number;
 export declare function countDimMismatches(db: IndexDb, model: string, expectedDim: number): number;
+export interface StagedActionRow {
+    id: string;
+    action_type: string;
+    target_path: string;
+    proposed_by: string;
+    proposed_at: string;
+    expires_at: string;
+    status: string;
+    rationale: string;
+    proposed_diff: string;
+    ratified_at: string | null;
+    ratified_by: string | null;
+    ratification_reason: string | null;
+}
+export declare function upsertStagedAction(db: IndexDb, row: StagedActionRow): void;
+export declare function clearStagedActions(db: IndexDb): void;
+export declare function getStagedAction(db: IndexDb, id: string): StagedActionRow | null;
+export declare function getAllStagedActions(db: IndexDb): StagedActionRow[];
+export declare function getStagedActionsByStatus(db: IndexDb, status: string): StagedActionRow[];
 //# sourceMappingURL=index-db.d.ts.map

package/dist/storage/index-db.d.ts.map

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package/dist/storage/index-db.js

@@ -94,6 +94,23 @@ CREATE TABLE IF NOT EXISTS meta (
   key   TEXT PRIMARY KEY,
   value TEXT NOT NULL
 );
+CREATE TABLE IF NOT EXISTS staged_actions (
+  id                  TEXT PRIMARY KEY,
+  action_type         TEXT NOT NULL,
+  target_path         TEXT NOT NULL,
+  proposed_by         TEXT NOT NULL,
+  proposed_at         TEXT NOT NULL,
+  expires_at          TEXT NOT NULL,
+  status              TEXT NOT NULL,
+  rationale           TEXT NOT NULL,
+  proposed_diff       TEXT NOT NULL,
+  ratified_at         TEXT,
+  ratified_by         TEXT,
+  ratification_reason TEXT
+);
+CREATE INDEX IF NOT EXISTS idx_staged_status ON staged_actions(status);
+CREATE INDEX IF NOT EXISTS idx_staged_target ON staged_actions(target_path);
+CREATE INDEX IF NOT EXISTS idx_staged_expires ON staged_actions(expires_at);
 `;
 // FTS5 virtual table over the `documents` body + title + tags. The
 // `content='documents'` link is a "contentless" external-content FTS5
@@ -521,4 +538,43 @@ export function countDimMismatches(db, model, expectedDim) {
         .get(model, expectedDim);
     return row.n;
 }
+// Inserts or replaces a staged-action row by id. Used by the jsonl→sqlite
+// rebuild; the proposal and its later decision collapse to one current row.
+export function upsertStagedAction(db, row) {
+    db.prepare(`INSERT INTO staged_actions
+       (id, action_type, target_path, proposed_by, proposed_at, expires_at, status,
+        rationale, proposed_diff, ratified_at, ratified_by, ratification_reason)
+     VALUES (?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?)
+     ON CONFLICT(id) DO UPDATE SET
+       action_type         = excluded.action_type,
+       target_path         = excluded.target_path,
+       proposed_by         = excluded.proposed_by,
+       proposed_at         = excluded.proposed_at,
+       expires_at          = excluded.expires_at,
+       status              = excluded.status,
+       rationale           = excluded.rationale,
+       proposed_diff       = excluded.proposed_diff,
+       ratified_at         = excluded.ratified_at,
+       ratified_by         = excluded.ratified_by,
+       ratification_reason = excluded.ratification_reason`).run(row.id, row.action_type, row.target_path, row.proposed_by, row.proposed_at, row.expires_at, row.status, row.rationale, row.proposed_diff, row.ratified_at, row.ratified_by, row.ratification_reason);
+}
+// Drops every staged-action row. Called at the start of a rebuild so a
+// reindex never leaves rows for actions the jsonl no longer reflects.
+export function clearStagedActions(db) {
+    db.exec("DELETE FROM staged_actions;");
+}
+export function getStagedAction(db, id) {
+    const row = db.prepare("SELECT * FROM staged_actions WHERE id = ?").get(id);
+    return row ?? null;
+}
+export function getAllStagedActions(db) {
+    return db.prepare("SELECT * FROM staged_actions ORDER BY id").all();
+}
+// Returns rows in a given status, soonest-to-expire first — the order the
+// lint surface and the future loop want.
+export function getStagedActionsByStatus(db, status) {
+    return db
+        .prepare("SELECT * FROM staged_actions WHERE status = ? ORDER BY expires_at")
+        .all(status);
+}
 //# sourceMappingURL=index-db.js.map

package/dist/storage/index-db.js.map

@@ -1 +1 @@
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package/dist/tools/curation.d.ts

@@ -1,5 +1,5 @@
 import { type AccessContext } from "../access/rbac.js";
-import { type LintCheckName, type LintFinding, type TensionHealth } from "../curation/lint.js";
+import { type LintCheckName, type LintFinding, type StagedActionLintItem, type TensionHealth } from "../curation/lint.js";
 import { type ProvenanceEntry } from "../curation/provenance.js";
 import { type TensionEntry } from "../curation/tension.js";
 import { type TensionBlastResult } from "../curation/tension-blast.js";
@@ -16,6 +16,7 @@ export interface VaultLintResult {
     checks: Partial<Record<LintCheckName, LintFinding[]>>;
     totalFindings: number;
     tensionHealth: TensionHealth;
+    stagedActions: StagedActionLintItem[];
 }
 export declare function vaultLint(vaultRoot: string, args?: Record<string, unknown>, access?: AccessContext): Promise<Result<VaultLintResult, Error>>;
 export interface VaultProvenanceResult {

package/dist/tools/curation.d.ts.map

@@ -1 +1 @@
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package/dist/tools/curation.js

@@ -11,6 +11,7 @@
 import { hasAnyRead } from "../access/rbac.js";
 import { LINT_CHECKS, runLint, } from "../curation/lint.js";
 import { readProvenanceLog } from "../curation/provenance.js";
+import { sweepExpiredActions } from "../curation/staged-actions.js";
 import { addTension, LOGGABLE_TENSION_KINDS, RESOLUTION_KINDS, resolveTension, } from "../curation/tension.js";
 import { computeTensionBlast } from "../curation/tension-blast.js";
 import { loadTensionClusters } from "../curation/tension-clusters.js";
@@ -201,6 +202,14 @@ export async function vaultLint(vaultRoot, args = {}, access) {
         }
         filter = args.filter;
     }
+    // Periodic cleanup (spec §11.2): expire any staged action past its TTL before
+    // reporting, so the "Staged actions" section reflects post-sweep state. The
+    // sweep mutates the canonical jsonl; the sqlite index is reconciled on the
+    // next reindex. A sweep failure means .daftari is unwritable — surface it
+    // loudly rather than silently reporting a stale queue.
+    const swept = await sweepExpiredActions(vaultRoot);
+    if (!swept.ok)
+        return swept;
     const report = await runLint(vaultRoot);
     if (!report.ok)
         return report;
@@ -212,6 +221,7 @@ export async function vaultLint(vaultRoot, args = {}, access) {
             checks: { [filter]: findings },
             totalFindings: findings.length,
             tensionHealth: report.value.tensionHealth,
+            stagedActions: report.value.stagedActions,
         });
     }
     return ok({
@@ -220,6 +230,7 @@ export async function vaultLint(vaultRoot, args = {}, access) {
         checks: report.value.checks,
         totalFindings: report.value.totalFindings,
         tensionHealth: report.value.tensionHealth,
+        stagedActions: report.value.stagedActions,
     });
 }
 // Returns the write history of a single document, oldest entry first, read
@@ -389,16 +400,19 @@ export const curationTools = [
     },
     {
         name: "vault_lint",
-        title: "Run curation checks",
-        annotations: { readOnlyHint: true },
+        // Not read-only: the staged-action sweep (§11.2) expires actions past
+        // their TTL, appending expiry records to .daftari/staged-actions.jsonl.
+        // It never edits vault content — only the staging queue's own lifecycle.
+        annotations: { readOnlyHint: false },
         description: "Run the advisory curation checks across the vault: stale files past " +
             "TTL, orphan files with no inbound links, old drafts, stagnant " +
             "low-confidence files, deprecated files still linked from canonical " +
             "ones, and questions raised but unanswered anywhere in the vault. " +
             "Also reports tension health (counts by kind and resolution kind, " +
             "stable acknowledged persistent disagreements, and legacy unspecified " +
-            "entries). Reports problems; never auto-fixes. Optionally filter to a " +
-            "single check.",
+            "entries) and lists pending staged actions awaiting ratification. " +
+            "Never auto-fixes vault content; it does, as housekeeping, expire " +
+            "staged actions past their TTL. Optionally filter to a single check.",
         inputSchema: {
             type: "object",
             properties: {

package/dist/tools/curation.js.map

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package/dist/tools/staged-actions.d.ts

@@ -0,0 +1,18 @@
+import { type AccessContext } from "../access/rbac.js";
+import { type Result } from "../frontmatter/types.js";
+import type { ToolDefinition } from "./read.js";
+export interface StageActionResult {
+    id: string;
+    expires_at: string;
+}
+export declare function vaultStageAction(vaultRoot: string, args: Record<string, unknown>, access?: AccessContext): Promise<Result<StageActionResult, Error>>;
+export interface RatifyResult {
+    action_id: string;
+    decision: "approve" | "reject";
+    applied: boolean;
+    commit?: string;
+    deferred_to?: string;
+}
+export declare function vaultRatify(vaultRoot: string, args: Record<string, unknown>, access?: AccessContext): Promise<Result<RatifyResult, Error>>;
+export declare const stagedActionTools: ToolDefinition[];
+//# sourceMappingURL=staged-actions.d.ts.map

package/dist/tools/staged-actions.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"staged-actions.d.ts","sourceRoot":"","sources":["../../src/tools/staged-actions.ts"],"names":[],"mappings":"AAeA,OAAO,EAAE,KAAK,aAAa,EAAc,MAAM,mBAAmB,CAAC;AAUnE,OAAO,EAAW,KAAK,MAAM,EAAE,MAAM,yBAAyB,CAAC;AAE/D,OAAO,KAAK,EAAE,cAAc,EAAE,MAAM,WAAW,CAAC;AA0BhD,MAAM,WAAW,iBAAiB;IAChC,EAAE,EAAE,MAAM,CAAC;IACX,UAAU,EAAE,MAAM,CAAC;CACpB;AAED,wBAAsB,gBAAgB,CACpC,SAAS,EAAE,MAAM,EACjB,IAAI,EAAE,MAAM,CAAC,MAAM,EAAE,OAAO,CAAC,EAC7B,MAAM,CAAC,EAAE,aAAa,GACrB,OAAO,CAAC,MAAM,CAAC,iBAAiB,EAAE,KAAK,CAAC,CAAC,CAkD3C;AAMD,MAAM,WAAW,YAAY;IAC3B,SAAS,EAAE,MAAM,CAAC;IAClB,QAAQ,EAAE,SAAS,GAAG,QAAQ,CAAC;IAC/B,OAAO,EAAE,OAAO,CAAC;IACjB,MAAM,CAAC,EAAE,MAAM,CAAC;IAChB,WAAW,CAAC,EAAE,MAAM,CAAC;CACtB;AAED,wBAAsB,WAAW,CAC/B,SAAS,EAAE,MAAM,EACjB,IAAI,EAAE,MAAM,CAAC,MAAM,EAAE,OAAO,CAAC,EAC7B,MAAM,CAAC,EAAE,aAAa,GACrB,OAAO,CAAC,MAAM,CAAC,YAAY,EAAE,KAAK,CAAC,CAAC,CA+GtC;AAMD,eAAO,MAAM,iBAAiB,EAAE,cAAc,EAwF7C,CAAC"}