@zigrivers/scaffold 3.23.0 → 3.24.1

package/content/skills/scaffold-runner/SKILL.md

@@ -202,9 +202,9 @@ When the user asks "what tools are available?", "what can I build?", or "show me
 | `scaffold run update` | Update scaffold to the latest version |
 | `scaffold run dashboard` | Open a visual progress dashboard in your browser |
 | `scaffold run prompt-pipeline` | Print the full pipeline reference table |
-| `scaffold run review-code` | Run all 3 code review channels on local code before commit or push |
-| `scaffold run review-pr` | Run all 3 code review channels (Codex CLI, Gemini CLI, Superpowers) on a PR |
-| `scaffold run post-implementation-review` | Full 3-channel codebase review after an AI agent completes all tasks |
+| `scaffold run review-code` | Run all 3 CLI review channels (Codex CLI, Gemini CLI, Claude CLI) on tracked local code (committed branch diff + staged + unstaged — no untracked files) before commit or push, plus Superpowers code-reviewer as a complementary 4th channel |
+| `scaffold run review-pr` | Run all 3 code review channels (Codex CLI, Gemini CLI, Claude CLI) on a PR, plus Superpowers code-reviewer as a complementary 4th channel |
+| `scaffold run post-implementation-review` | Full codebase review (Codex CLI, Gemini CLI, Superpowers code-reviewer) after an AI agent completes all tasks |
 | `scaffold run session-analyzer` | Analyze Claude Code session logs for patterns and insights |
 
 **Display rules:**
@@ -240,7 +240,8 @@ Respond to these natural language requests:
 | "Is X applicable?" / "Do I need X?" | Run `scaffold check <step>` to detect platform and brownfield status |
 | "Set up memory" / "Configure AI memory" / "Add memory" | Run `scaffold run ai-memory-setup` — sets up modular rules, optional MCP memory server, and external context |
 | "Set up testing" / "Add Playwright" / "Add Maestro" | Run `scaffold run add-e2e-testing` — auto-detects web/mobile and configures the right framework(s) |
-| "Run multi-model review" / "Review stories with other models" | Run `scaffold run review-user-stories` at depth 5 (multi-model capabilities are now built into review-user-stories) |
+| "Run multi-model review" / "Review X with all three models" | Route by target — see [Multi-Model Review Routing](#multi-model-review-routing) |
+| "Review stories with other models" | Run `scaffold run review-user-stories` at depth 5 (multi-model capabilities are built into review-user-stories) |
 | "Skip X" | Run `scaffold skip <step> --reason "<user's reason>"` |
 | "Skip X, Y, and Z" | Run `scaffold skip <step1> <step2> <step3> --reason "<reason>"` |
 | "What's left?" / "Show remaining" | Run `scaffold status --compact`, show only pending/in-progress steps |
@@ -338,28 +339,73 @@ scaffold check add-e2e-testing
 
 This is useful when the user asks "Do I need this step?" or when previewing which optional steps apply before running them.
 
+### Multi-Model Review Routing
+
+When the user asks for a "multi-model review", "review this with all three models",
+"run MMR on X", or similar — **do not assume the target is a PR**. Route based on
+what the user is pointing at:
+
+| Target | Command |
+|---|---|
+| GitHub PR (explicit number or current branch's PR) | `scaffold run review-pr [<PR#>]` |
+| Local uncommitted / staged code, before commit or push | `scaffold run review-code` |
+| Pending edits to a tracked file (changes since HEAD) | `git diff HEAD -- <path> \| mmr review --diff - --sync --format json` |
+| Current contents of any file (tracked-with-no-changes, untracked, or brand-new) | `(diff -u /dev/null <path> \|\| true) \| mmr review --diff - --sync --format json` |
+| A branch diff against main (or another ref) | `mmr review --base <ref> --head <ref> --sync --format json` |
+| An existing patch or diff file | `mmr review --diff <path.patch> --sync --format json` |
+| A diff piped from another command | `<cmd> \| mmr review --diff - --sync --format json` (stdin) |
+| A user-story review specifically at depth 5 | `scaffold run review-user-stories` |
+
+If the user's target is ambiguous ("review this with MMR"), ask once which of
+the above applies — don't default to `review-pr` just because it's the most
+common entry point. Doc reviews and uncommitted-work reviews are equally
+first-class.
+
+Pass `--focus "..."` to MMR when the user describes what to evaluate (clarity,
+completeness, security, performance, etc.). See the `mmr` skill for all input
+modes and flags.
+
+**Note on `--diff`:** the flag requires diff-format content (path to a
+`.patch`/`.diff` file, or `-` for stdin). To review a regular document or
+source file, wrap it in a diff first using `git diff HEAD -- <path>`
+(tracked) or `(diff -u /dev/null <path> || true)` (untracked — the
+`|| true` guard is required because `diff` exits 1 whenever files
+differ, which breaks pipelines under `set -o pipefail`) and pipe the
+result into `mmr review --diff -`.
+
 ### Multi-Model Review at Depth 4-5
 
-All review and validation steps now support independent multi-model validation at depth 4-5 using Codex and/or Gemini CLIs. The `multi-model-dispatch` skill documents the correct invocation patterns:
+All review and validation steps support independent multi-model validation at depth 4-5. Two distinct paths exist — **never mix them** — pick based on what step is running:
 
-- **Codex**: `codex exec --skip-git-repo-check -s read-only --ephemeral "prompt" 2>/dev/null` (NOT bare `codex`)
-- **Gemini**: `NO_BROWSER=true gemini -p "prompt" --output-format json --approval-mode yolo 2>/dev/null`
+#### Path A: MMR-backed review (PREFERRED — always use for these steps)
 
-**`NO_BROWSER=true` is required for all Gemini invocations** from Claude Code's Bash tool. Without it, Gemini's child process relaunch shows a consent prompt that hangs in non-TTY shells.
+Applies to: `scaffold run review-pr`, `scaffold run review-code`, and any pipeline review step that invokes `mmr review` directly.
 
-**Auth verification is mandatory before dispatch.** CLI tokens expire mid-session. Before running any review at depth 4-5:
-1. Check Codex auth: `codex login status`
-2. Check Gemini auth: `NO_BROWSER=true gemini -p "respond with ok" -o json` (exit 41 = auth failure)
-3. If auth fails, tell the user to re-authenticate: `! gemini -p "hello"` or `! codex login` (the `!` prefix runs it interactively with TTY access)
-4. **Never silently skip a CLI due to auth failure** — surface it to the user
+- **Channel model:** three CLIs (Codex + Gemini + Claude) dispatched and reconciled by the MMR CLI; scaffold wrappers add the Superpowers code-reviewer agent as a complementary 4th channel reconciled into the same MMR job via `mmr reconcile`.
+- **Note:** `scaffold run post-implementation-review` follows a different channel layout (raw-CLI dispatch of Codex + Gemini + Superpowers, with optional `mmr reconcile` injection if a prior `mmr review` job exists). Treat it as its own path — consult `content/tools/post-implementation-review.md` for specifics.
+- **Invocation:** go through the wrapper (`scaffold run …`) or call `mmr review …` directly. Do NOT shell out to `codex`/`gemini`/`claude` yourself for these steps — MMR handles dispatch, parsing, compensating passes, and verdict.
+- **Auth pre-flight:** run `mmr config test` once per session — it probes all three CLIs and reports status in one call.
+- **If auth fails** for any channel, surface recovery commands to the user: `! codex login`, `! gemini -p "hello"`, or `! claude login`. MMR will emit a compensating pass (via `claude -p`) for each missing external channel, labelled `[compensating: Codex-equivalent]` / `[compensating: Gemini-equivalent]`. Maximum achievable verdict in that case is `degraded-pass`.
+- **Never silently skip a CLI due to auth failure** — surface it to the user.
+
+#### Path B: Legacy / non-MMR direct dispatch
+
+Applies to: some older depth-5 validation steps and any ad-hoc manual dispatch not routed through MMR. The `multi-model-dispatch` skill documents the raw invocation patterns:
+
+- **Codex:** `codex exec --skip-git-repo-check -s read-only --ephemeral "prompt" 2>/dev/null` (NOT bare `codex`)
+- **Gemini:** `NO_BROWSER=true gemini -p "prompt" --output-format json --approval-mode yolo 2>/dev/null`
+- **Claude CLI:** `claude -p "prompt" --output-format json 2>/dev/null`
+
+**`NO_BROWSER=true` is required for all Gemini invocations** from Claude Code's Bash tool. Without it, Gemini's child process relaunch shows a consent prompt that hangs in non-TTY shells.
 
-When running a review step at depth 4-5:
-1. Check CLI availability before dispatching
-2. If both available, run dual-model review for highest quality
-3. If one available, run single-model external review
-4. If neither available, fall back to Claude-only adversarial self-review
+Auth pre-flight for Path B dispatch:
+1. Codex: `codex login status`
+2. Gemini: `NO_BROWSER=true gemini -p "respond with ok" -o json` (exit 41 = auth failure)
+3. Claude CLI: `claude -p "respond with ok"` (typically uses the active Claude Code session)
+4. If any fail: `! codex login`, `! gemini -p "hello"`, or `! claude login` (the `!` prefix runs it interactively with TTY access).
+5. **Never silently skip a CLI due to auth failure** — surface it to the user.
 
-The runner should surface the depth choice as a decision point for review steps, noting that depth 4-5 enables multi-model validation if CLIs are available.
+The runner should surface the depth choice as a decision point for review steps, noting that depth 4-5 enables three-CLI multi-model validation when the CLIs are available.
 
 ## Batch Execution
 

package/content/tools/review-code.md

@@ -1,7 +1,7 @@
 ---
 name: review-code
 description: Run all configured code review channels on local code before commit or push
-summary: "Review the current local delivery candidate with Codex CLI, Gemini CLI, and Superpowers before committing or pushing, using staged changes, an explicit ref range, or the current branch diff."
+summary: "Review the current local delivery candidate with the three MMR CLI channels (Codex CLI, Gemini CLI, Claude CLI) plus the Superpowers code-reviewer agent as a complementary 4th channel reconciled into the same MMR job, before committing or pushing. Supports staged changes, an explicit ref range, or the full local delivery candidate (committed branch diff + staged + unstaged); untracked files are not included."
 phase: null
 order: null
 dependencies: []
@@ -15,15 +15,27 @@ argument-hint: "[--base <ref>] [--head <ref>] [--staged] [--report-only]"
 
 ## Purpose
 
-Run the same three-channel review stack used by `review-pr`, but on local code
-before commit or push. This is the preflight review entry point for bug fixes,
-small features, and quick tasks when the user wants multi-model review before
-anything leaves the machine.
+Run the same review stack used by `review-pr` (three MMR CLI channels plus
+the Superpowers code-reviewer agent as a complementary 4th channel), but on
+local code before commit or push. This is the preflight review entry point
+for bug fixes, small features, and quick tasks when the user wants
+multi-model review before anything leaves the machine.
 
-The three channels are:
+The three CLI channels are:
 1. **Codex CLI** — implementation correctness, security, API contracts
 2. **Gemini CLI** — architectural patterns, broad-context reasoning
-3. **Claude CLI** — Claude subagent review of code quality, tests, and plan alignment
+3. **Claude CLI** — code quality, tests, and plan alignment
+
+Plus the 4th channel:
+4. **Superpowers code-reviewer** — agent-based review dispatched via the
+   `superpowers:code-reviewer` skill, reconciled into the same MMR job via
+   `mmr reconcile` for a unified verdict.
+
+Scope: the full local delivery candidate (committed branch diff + staged +
+unstaged changes) by default, or a narrower slice when `--staged` or
+`--base`/`--head` flags are provided. **Untracked files are not reviewed** —
+use `(diff -u /dev/null <path> || true) | mmr review --diff -` directly for
+brand-new files.
 
 ## Inputs
 
@@ -40,7 +52,7 @@ The three channels are:
 
 ## Expected Outputs
 
-- A three-channel review summary for the local delivery candidate
+- A reconciled four-channel review summary for the local delivery candidate (three MMR CLI channels + Superpowers code-reviewer)
 - One of these verdicts: `pass`, `degraded-pass`, `blocked`, `needs-user-decision`
 - Fixed code when findings are resolved in normal mode
 
@@ -48,16 +60,58 @@ The three channels are:
 
 ### Primary: MMR CLI + Agent Reconcile
 
-When the MMR CLI is installed, use it as the primary entry point:
+When the MMR CLI is installed, use it as the primary entry point. Pick the
+invocation that matches the scope the user asked for:
 
 ```bash
-# Staged changes
+# Default (no flags) — full local delivery candidate:
+# committed branch diff (vs origin/main or main) + staged + unstaged.
+# `mmr review` with no input flags defaults to `git diff` alone
+# (unstaged only), so we MUST synthesize the combined bundle explicitly
+# and pipe it in via --diff -:
+# Resolve the TRUNK ref (not the branch's own upstream — we want the
+# full delivery candidate, not just un-pushed work). Precedence:
+# origin/HEAD (the remote's default branch) → origin/main → main →
+# origin/master → master → HEAD~1 → HEAD (working-tree-only fallback).
+# NOTE: do NOT use `@{u}` / branch upstream here — on a feature branch
+# that tracks `origin/<branch>`, `@{u}` is that remote branch, so
+# diffing against its merge-base would silently exclude already-pushed
+# branch commits from the review.
+BASE_REF=""
+if   ORIGIN_HEAD=$(git symbolic-ref refs/remotes/origin/HEAD 2>/dev/null); then BASE_REF="${ORIGIN_HEAD#refs/remotes/}"
+elif git rev-parse --verify origin/main   >/dev/null 2>&1; then BASE_REF=origin/main
+elif git rev-parse --verify main          >/dev/null 2>&1; then BASE_REF=main
+elif git rev-parse --verify origin/master >/dev/null 2>&1; then BASE_REF=origin/master
+elif git rev-parse --verify master        >/dev/null 2>&1; then BASE_REF=master
+elif git rev-parse --verify HEAD~1        >/dev/null 2>&1; then BASE_REF=HEAD~1
+else                                                           BASE_REF=HEAD
+fi
+# Compute the merge-base so we only review the local delivery candidate,
+# not unrelated upstream changes that have accumulated on BASE_REF since
+# the branch diverged. `git diff <merge-base>` then compares that point
+# to the working tree (including the index), giving one coherent patch
+# that covers committed branch work + staged + unstaged edits, with
+# repeated edits to the same file collapsed into a single final hunk.
+MERGE_BASE=$(git merge-base "$BASE_REF" HEAD 2>/dev/null || echo "$BASE_REF")
+git diff "$MERGE_BASE" | mmr review --diff - --sync --format json
+
+# Staged changes only:
 mmr review --staged --sync --format json
 
-# Branch diff against main
+# Branch diff against main (committed only, no staged/unstaged):
 mmr review --base main --sync --format json
+
+# Explicit ref range:
+mmr review --base <base-ref> --head <head-ref> --sync --format json
 ```
 
+Routing rules:
+- If `--staged` flag passed to the tool → use the `--staged` MMR invocation
+- If `--base`/`--head` flags passed → use the ref-range MMR invocation
+- Otherwise (no flags) → use the synthesized full-delivery-candidate form
+  above. Do NOT fall back to bare `mmr review` — it would miss committed
+  and staged work.
+
 After the CLI review completes, dispatch the agent's code-reviewer skill (4th channel) and inject findings into the MMR job for unified reconciliation:
 
 ```bash
@@ -89,11 +143,14 @@ Determine the delivery candidate to review.
 
 #### Mode A: Explicit ref range
 
-If both `BASE_REF` and `HEAD_REF` are provided:
+If `BASE_REF` is provided (with or without `HEAD_REF`):
 
 ```bash
 git rev-parse --verify "$BASE_REF"
-git rev-parse --verify "$HEAD_REF"
+# When --head is omitted, default head to HEAD so the base-only form
+# mirrors the MMR primary path (`mmr review --base <ref>`).
+HEAD_REF="${HEAD_REF:-HEAD}"
+[ "$HEAD_REF" != "HEAD" ] && git rev-parse --verify "$HEAD_REF"
 REVIEW_DIFF=$(git diff "$BASE_REF...$HEAD_REF")
 CHANGED_FILES=$(git diff --name-only "$BASE_REF...$HEAD_REF")
 ```
@@ -198,7 +255,7 @@ codex login status 2>/dev/null
 - If `codex` is not installed: skip this channel and record root-cause `not_installed`
 - If auth fails: tell the user to run `! codex login`, retry after recovery, and if recovery is not possible, record root-cause `auth_failed` and continue with the remaining channels
 
-If auth cannot be recovered, or if Codex is not installed, queue a compensating Claude self-review pass focused on implementation correctness, security, and API contracts. Label findings as `[compensating: Codex-equivalent]`. If auth check times out (~5s), retry once; if still failing, record `timeout` and queue compensating pass. This pass runs after all channel dispatch attempts complete.
+If auth cannot be recovered, or if Codex is not installed, queue a compensating Claude self-review pass focused on implementation correctness, security, and API contracts. Label findings as `[compensating: Codex-equivalent]`. If the auth check times out (the configured `channels.codex.auth.timeout`; 5s by default since Codex's check is a local file probe), retry once; if still failing, record `timeout` and queue compensating pass. This pass runs after all channel dispatch attempts complete.
 
 Build the prompt in a temporary file and pass it over stdin:
 
@@ -222,7 +279,7 @@ NO_BROWSER=true gemini -p "respond with ok" -o json 2>&1
 - If `gemini` is not installed: skip this channel and record root-cause `not_installed`
 - If auth fails (including exit 41): tell the user to run `! gemini -p "hello"`, retry after recovery, and if recovery is not possible, record root-cause `auth_failed` and continue with the remaining channels
 
-If auth cannot be recovered, or if Gemini is not installed, queue a compensating Claude self-review pass focused on architectural patterns, design reasoning, and broad context. Label findings as `[compensating: Gemini-equivalent]`. If auth check times out (~5s), retry once; if still failing, record `auth timeout` and queue compensating pass. This pass runs after all channel dispatch attempts complete.
+If auth cannot be recovered, or if Gemini is not installed, queue a compensating Claude self-review pass focused on architectural patterns, design reasoning, and broad context. Label findings as `[compensating: Gemini-equivalent]`. If the auth check times out (the configured `channels.gemini.auth.timeout`; 20s by default since Gemini's check is a full LLM round-trip), retry once; if still failing, record `auth timeout` and queue compensating pass. This pass runs after all channel dispatch attempts complete.
 
 Build the prompt in a temporary file and pass it as a single prompt string:
 
@@ -348,7 +405,8 @@ Output a concise summary in this format:
 ### Channels Executed
 - Codex CLI — root cause: [completed / not_installed / auth_failed / timeout / failed], coverage: [full / compensating (Codex-equivalent)]
 - Gemini CLI — root cause: [completed / not_installed / auth_failed / timeout / failed], coverage: [full / compensating (Gemini-equivalent)]
-- Claude CLI — root cause: [completed / not_installed / auth_failed / timeout / failed], coverage: [full / compensating]
+- Claude CLI — root cause: [completed / not_installed / auth_failed / timeout / failed], coverage: [full / none (Claude is never compensated — it IS the compensator for Codex/Gemini)]
+- Agent review (Superpowers code-reviewer, 4th channel) — [completed / skipped], injected via `mmr reconcile`
 
 ### Findings
 [consensus findings first, then single-source findings]

package/content/tools/review-pr.md

@@ -14,9 +14,28 @@ argument-hint: "<PR number or blank for current branch>"
 
 ## Purpose
 
-Run all three code review channels on a pull request and reconcile findings.
-This is the single entry point for PR code review — agents call this once instead
-of remembering three separate review invocations.
+Run the three CLI review channels (Codex, Gemini, Claude) on a pull request
+**plus** the Superpowers code-reviewer agent as a complementary 4th channel,
+and reconcile all findings through MMR. This is the single entry point for
+**PR-scoped** code review — agents call this once instead of remembering four
+separate review invocations.
+
+**For non-PR targets**, don't use this tool. Call `mmr review` directly with
+the appropriate input mode, or use `scaffold run review-code` for local
+pre-commit review:
+
+- `mmr review --staged` — staged changes
+- `mmr review --base <ref> --head <ref>` — branch diff
+- `mmr review --diff <path.patch>` — existing diff/patch file
+- `<git diff …> | mmr review --diff -` — any piped diff (including a single
+  tracked file via `git diff HEAD -- <path>`, or a new file via
+  `(diff -u /dev/null <path> || true)` — the `|| true` guard is required
+  because `diff` exits 1 whenever files differ, which breaks pipelines
+  under `set -o pipefail`)
+
+The `--diff` flag expects diff-format content; it does not read raw document
+content. The three-channel review itself is not PR-specific — this tool is
+just the PR wrapper around the more general `mmr review` CLI.
 
 The three channels are:
 1. **Codex CLI** — OpenAI's code analysis (implementation correctness, security, API contracts)
@@ -34,7 +53,7 @@ in the review criteria config rather than read at dispatch time.
 
 ## Expected Outputs
 
-- All three review channels executed (or fallback documented)
+- All three CLI review channels executed (or fallback documented) plus the Superpowers code-reviewer 4th channel reconciled via `mmr reconcile`
 - P0/P1/P2 findings fixed before proceeding
 - Review summary with per-channel results and reconciliation
 
@@ -161,7 +180,7 @@ Output a review summary in this format:
 ### Channels Executed
 - [ ] Codex CLI — root cause: [completed / not installed / auth failed / timeout / failed], coverage: [full / compensating (Codex-equivalent)]
 - [ ] Gemini CLI — root cause: [completed / not installed / auth failed / timeout / failed], coverage: [full / compensating (Gemini-equivalent)]
-- [ ] Claude CLI — root cause: [completed / not_installed / auth_failed / timeout / failed], coverage: [full / compensating]
+- [ ] Claude CLI — root cause: [completed / not_installed / auth_failed / timeout / failed], coverage: [full / none (Claude is never compensated — it IS the compensator for Codex/Gemini)]
 - [ ] Agent review — [completed / skipped], injected via mmr reconcile
 
 ### Consensus Findings (High Confidence)
@@ -226,7 +245,7 @@ Do NOT proceed to the next task or merge until this confirmation is output.
 ## Process Rules
 
 1. **Foreground only** — Always run Codex, Gemini, and Claude CLI commands as foreground Bash calls. Never use `run_in_background`, `&`, or `nohup`.
-2. **All three channels are mandatory** — Codex CLI, Gemini CLI, and Claude CLI. Skip only when a tool is genuinely not installed, never by choice.
+2. **All three CLI channels are mandatory** — Codex CLI, Gemini CLI, and Claude CLI. Plus the Superpowers code-reviewer agent as a complementary 4th channel reconciled via `mmr reconcile` (Step 3). Skip a CLI channel only when a tool is genuinely not installed or auth cannot be recovered (in which case MMR emits a compensating pass for missing Codex/Gemini channels; a missing Claude CLI has no compensator). Never skip by choice.
 3. **Auth failures are not silent** — always surface to the user with the exact recovery command.
 4. **Independence** — never share one channel's output with another. Each reviews the diff independently.
 5. **Fix before proceeding** — P0/P1/P2 findings must be resolved before moving to the next task.

package/dist/cli/commands/check.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"check.d.ts","sourceRoot":"","sources":["../../../src/cli/commands/check.ts"],"names":[],"mappings":"AAAA,OAAO,KAAK,EAAE,aAAa,EAAE,MAAM,OAAO,CAAA;AAW1C,UAAU,SAAS;IACjB,IAAI,EAAE,MAAM,CAAA;IACZ,MAAM,CAAC,EAAE,MAAM,CAAA;IACf,IAAI,CAAC,EAAE,OAAO,CAAA;IACd,OAAO,CAAC,EAAE,OAAO,CAAA;IACjB,IAAI,CAAC,EAAE,MAAM,CAAA;IACb,KAAK,CAAC,EAAE,OAAO,CAAA;CAChB;AA+FD,QAAA,MAAM,YAAY,EAAE,aAAa,CAAC,MAAM,CAAC,MAAM,EAAE,OAAO,CAAC,EAAE,SAAS,CA0NnE,CAAA;AAED,eAAe,YAAY,CAAA"}
+{"version":3,"file":"check.d.ts","sourceRoot":"","sources":["../../../src/cli/commands/check.ts"],"names":[],"mappings":"AAAA,OAAO,KAAK,EAAE,aAAa,EAAE,MAAM,OAAO,CAAA;AAW1C,UAAU,SAAS;IACjB,IAAI,EAAE,MAAM,CAAA;IACZ,MAAM,CAAC,EAAE,MAAM,CAAA;IACf,IAAI,CAAC,EAAE,OAAO,CAAA;IACd,OAAO,CAAC,EAAE,OAAO,CAAA;IACjB,IAAI,CAAC,EAAE,MAAM,CAAA;IACb,KAAK,CAAC,EAAE,OAAO,CAAA;CAChB;AA+FD,QAAA,MAAM,YAAY,EAAE,aAAa,CAAC,MAAM,CAAC,MAAM,EAAE,OAAO,CAAC,EAAE,SAAS,CAmOnE,CAAA;AAED,eAAe,YAAY,CAAA"}

package/dist/cli/commands/check.js

@@ -1,4 +1,4 @@
-import { execSync } from 'node:child_process';
+import { execFileSync } from 'node:child_process';
 import fs from 'node:fs';
 import path from 'node:path';
 import { discoverMetaPrompts } from '../../core/assembly/meta-prompt-loader.js';
@@ -18,7 +18,7 @@ const MOBILE_SIGNALS = new Set([
 ]);
 function detectGithubRemote(projectRoot) {
     try {
-        const output = execSync('git remote -v', { cwd: projectRoot, encoding: 'utf8', timeout: 5000 });
+        const output = execFileSync('git', ['remote', '-v'], { cwd: projectRoot, encoding: 'utf8', timeout: 5000 });
         const hasGithub = output.includes('github.com');
         return {
             hasGithub,
@@ -158,21 +158,32 @@ const checkCommand = {
             const applicable = hasGithub;
             const hasAgentsMd = fs.existsSync(path.join(projectRoot, 'AGENTS.md'));
             const mode = !applicable ? 'skip' : hasAgentsMd ? 'update' : 'fresh';
-            // Detect available CLIs for local review
-            let hasCodexCli = false;
-            let hasGeminiCli = false;
-            try {
-                execSync('command -v codex', { encoding: 'utf8', timeout: 3000 });
-                hasCodexCli = true;
-            }
-            catch { /* not available */ }
-            try {
-                execSync('command -v gemini', { encoding: 'utf8', timeout: 3000 });
-                hasGeminiCli = true;
-            }
-            catch { /* not available */ }
-            const availableClis = [hasCodexCli && 'codex', hasGeminiCli && 'gemini'].filter(Boolean);
+            // Detect available CLIs for local review (three MMR channels)
+            const detectCli = (name) => {
+                try {
+                    execFileSync('sh', ['-c', 'command -v "$1"', '--', name], { encoding: 'utf8', timeout: 3000 });
+                    return true;
+                }
+                catch {
+                    return false;
+                }
+            };
+            const hasCodexCli = detectCli('codex');
+            const hasGeminiCli = detectCli('gemini');
+            const hasClaudeCli = detectCli('claude');
+            const availableClis = [
+                hasCodexCli && 'codex',
+                hasGeminiCli && 'gemini',
+                hasClaudeCli && 'claude',
+            ].filter(Boolean);
             const recommendedMode = availableClis.length > 0 ? 'local-cli' : 'external-bot';
+            let modeLabel = '';
+            if (availableClis.length >= 3)
+                modeLabel = ' (three-CLI MMR review)';
+            else if (availableClis.length === 2)
+                modeLabel = ' (two-CLI MMR review)';
+            else if (availableClis.length === 1)
+                modeLabel = ' (single-CLI review)';
             if (outputMode === 'json') {
                 output.result({
                     step: argv.step,
@@ -192,7 +203,7 @@ const checkCommand = {
                 output.info(`GitHub remote: ${hasGithub ? 'yes' : 'no'}`);
                 output.info(`CI configured: ${hasCi ? 'yes' : 'no'}`);
                 output.info(`Available CLIs: ${availableClis.length > 0 ? availableClis.join(', ') : 'none'}`);
-                output.info(`Recommended: ${recommendedMode}${availableClis.length === 2 ? ' (dual-model)' : ''}`);
+                output.info(`Recommended: ${recommendedMode}${modeLabel}`);
                 output.info(`Mode: ${mode}`);
                 output.info(`Reason: ${githubReason}`);
             }

package/dist/cli/commands/check.js.map

@@ -1 +1 @@
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package/dist/cli/commands/status.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"status.d.ts","sourceRoot":"","sources":["../../../src/cli/commands/status.ts"],"names":[],"mappings":"AAAA,OAAO,KAAK,EAAE,aAAa,EAAE,MAAM,OAAO,CAAA;AAiE1C,UAAU,UAAU;IAClB,KAAK,CAAC,EAAE,MAAM,CAAA;IACd,OAAO,CAAC,EAAE,OAAO,CAAA;IACjB,MAAM,CAAC,EAAE,MAAM,CAAA;IACf,IAAI,CAAC,EAAE,OAAO,CAAA;IACd,OAAO,CAAC,EAAE,OAAO,CAAA;IACjB,IAAI,CAAC,EAAE,MAAM,CAAA;IACb,KAAK,CAAC,EAAE,OAAO,CAAA;IACf,OAAO,CAAC,EAAE,MAAM,CAAA;CACjB;AAID,QAAA,MAAM,aAAa,EAAE,aAAa,CAAC,MAAM,CAAC,MAAM,EAAE,OAAO,CAAC,EAAE,UAAU,CA+NrE,CAAA;AAED,eAAe,aAAa,CAAA"}
+{"version":3,"file":"status.d.ts","sourceRoot":"","sources":["../../../src/cli/commands/status.ts"],"names":[],"mappings":"AAAA,OAAO,KAAK,EAAE,aAAa,EAAE,MAAM,OAAO,CAAA;AAiE1C,UAAU,UAAU;IAClB,KAAK,CAAC,EAAE,MAAM,CAAA;IACd,OAAO,CAAC,EAAE,OAAO,CAAA;IACjB,MAAM,CAAC,EAAE,MAAM,CAAA;IACf,IAAI,CAAC,EAAE,OAAO,CAAA;IACd,OAAO,CAAC,EAAE,OAAO,CAAA;IACjB,IAAI,CAAC,EAAE,MAAM,CAAA;IACb,KAAK,CAAC,EAAE,OAAO,CAAA;IACf,OAAO,CAAC,EAAE,MAAM,CAAA;CACjB;AAID,QAAA,MAAM,aAAa,EAAE,aAAa,CAAC,MAAM,CAAC,MAAM,EAAE,OAAO,CAAC,EAAE,UAAU,CA8OrE,CAAA;AAED,eAAe,aAAa,CAAA"}

package/dist/cli/commands/status.js

@@ -150,7 +150,14 @@ const statusCommand = {
         }
         // 6. Check command staleness
         const staleCommandCount = checkCommandStaleness(projectRoot);
-        // Build phases array: group meta-prompts by phase with per-phase counts
+        // Build phases array: group meta-prompts by phase with per-phase counts.
+        // We hide entries that are *disabled by overlay AND in `pending` status* —
+        // those are the leak class fix B prunes from state. Disabled steps with
+        // historical status (completed/skipped) or active work (in_progress)
+        // remain visible so the operator can see audit/active context. Steps
+        // absent from the overlay default to enabled (matches buildGraph's
+        // default-true behavior).
+        const isDisabled = (slug) => pipeline.overlay.steps[slug]?.enabled === false;
         const phasesData = PHASES.map(phaseInfo => {
             const phaseSteps = [...context.metaPrompts.values()]
                 .filter(m => m.frontmatter.phase === phaseInfo.slug)
@@ -162,7 +169,8 @@ const statusCommand = {
                     status: entry?.status ?? 'pending',
                     ...(cd && cd.length > 0 ? { crossDependencies: cd } : {}),
                 };
-            });
+            })
+                .filter(s => !(isDisabled(s.slug) && s.status === 'pending'));
             const phaseCompleted = phaseSteps.filter(s => s.status === 'completed').length;
             const phaseSkipped = phaseSteps.filter(s => s.status === 'skipped').length;
             const phasePending = phaseSteps.filter(s => s.status === 'pending').length;
@@ -191,6 +199,7 @@ const statusCommand = {
             if (isCompact) {
                 result.compact = true;
                 result.steps = Object.entries(steps)
+                    .filter(([slug, entry]) => !(isDisabled(slug) && entry.status === 'pending'))
                     .filter(([, entry]) => actionableStatuses.has(entry.status))
                     .map(([slug, entry]) => {
                     const cd = crossDepMap.get(slug);
@@ -218,6 +227,12 @@ const statusCommand = {
                 pending: '○',
             };
             for (const [slug, entry] of Object.entries(steps)) {
+                // Mirror phasesData: hide overlay-disabled entries that are still
+                // `pending` (the bug class fix B prunes). Keep historical
+                // (completed/skipped) and active-work (in_progress) entries
+                // visible so the operator retains audit + active-work context.
+                if (isDisabled(slug) && entry.status === 'pending')
+                    continue;
                 if (isCompact && !actionableStatuses.has(entry.status))
                     continue;
                 const fm = pipeline.stepMeta.get(slug);

package/dist/cli/commands/status.js.map

@@ -1 +1 @@
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