@zigrivers/scaffold 3.13.0 → 3.15.0

package/dist/cli/commands/adopt.serialization.test.js

@@ -38,6 +38,7 @@ vi.mock('../../state/state-manager.js', () => ({
 }));
 vi.mock('../../state/lock-manager.js', () => ({
     acquireLock: vi.fn(() => ({ acquired: true })),
+    getLockPath: vi.fn(() => '/mock/.scaffold/lock.json'),
     releaseLock: vi.fn(),
 }));
 vi.mock('../../project/adopt.js', () => ({
@@ -73,11 +74,19 @@ vi.mock('../../project/adopt.js', () => ({
         ml: 'mlConfig',
         'browser-extension': 'browserExtensionConfig',
         game: 'gameConfig',
+        research: 'researchConfig',
     },
 }));
 vi.mock('../../core/assembly/meta-prompt-loader.js', () => ({
     discoverMetaPrompts: vi.fn(() => new Map()),
 }));
+vi.mock('../shutdown.js', () => ({
+    shutdown: {
+        registerLockOwnership: vi.fn(),
+        releaseLockOwnership: vi.fn(),
+        withResource: vi.fn(async (_name, _cleanup, fn) => fn()),
+    },
+}));
 vi.mock('../../utils/fs.js', () => ({
     getPackagePipelineDir: vi.fn(() => '/fake/pipeline'),
 }));
@@ -206,6 +215,46 @@ describe('adopt CLI JSON serialization', () => {
         expect(json.game_config).toEqual({ engine: 'unity' });
         expect(json.detected_config).toEqual({ type: 'game', config: { engine: 'unity' } });
     });
+    it('research detection roundtrips through JSON serialization', async () => {
+        vi.mocked(runAdoption).mockResolvedValueOnce({
+            mode: 'brownfield',
+            artifactsFound: 0,
+            detectedArtifacts: [],
+            stepsCompleted: [],
+            stepsRemaining: [],
+            methodology: 'deep',
+            errors: [],
+            warnings: [],
+            projectType: 'research',
+            detectedConfig: {
+                type: 'research',
+                config: {
+                    experimentDriver: 'code-driven',
+                    interactionMode: 'checkpoint-gated',
+                    hasExperimentTracking: true,
+                    domain: 'quant-finance',
+                },
+            },
+            detectionConfidence: 'high',
+            detectionEvidence: [{ signal: 'jupyter-notebooks', file: 'experiments/' }],
+        });
+        await adoptCommand.handler(defaultArgv());
+        const json = parseJsonOutput();
+        expect(json.project_type).toBe('research');
+        expect(json.detected_config).toEqual({
+            type: 'research',
+            config: {
+                experimentDriver: 'code-driven',
+                interactionMode: 'checkpoint-gated',
+                hasExperimentTracking: true,
+                domain: 'quant-finance',
+            },
+        });
+        expect(json.detection_confidence).toBe('high');
+        expect(json.detection_evidence).toEqual([
+            { signal: 'jupyter-notebooks', file: 'experiments/' },
+        ]);
+    });
     it('omits optional fields when not present', async () => {
         vi.mocked(runAdoption).mockResolvedValueOnce({
             mode: 'brownfield',

package/dist/cli/commands/adopt.serialization.test.js.map

@@ -1 +1 @@
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package/dist/cli/commands/adopt.test.js

@@ -34,6 +34,7 @@ vi.mock('../../state/state-manager.js', () => ({
 }));
 vi.mock('../../state/lock-manager.js', () => ({
     acquireLock: vi.fn(() => ({ acquired: true })),
+    getLockPath: vi.fn(() => '/mock/.scaffold/lock.json'),
     releaseLock: vi.fn(),
 }));
 vi.mock('../../project/adopt.js', () => ({
@@ -62,6 +63,13 @@ vi.mock('../../project/adopt.js', () => ({
 vi.mock('../../core/assembly/meta-prompt-loader.js', () => ({
     discoverMetaPrompts: vi.fn(() => new Map()),
 }));
+vi.mock('../shutdown.js', () => ({
+    shutdown: {
+        registerLockOwnership: vi.fn(),
+        releaseLockOwnership: vi.fn(),
+        withResource: vi.fn(async (_name, _cleanup, fn) => fn()),
+    },
+}));
 // ---------------------------------------------------------------------------
 // Imports (after mocks)
 // ---------------------------------------------------------------------------

package/dist/cli/commands/adopt.test.js.map

@@ -1 +1 @@
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package/dist/cli/commands/build.d.ts.map

@@ -1 +1 @@
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package/dist/cli/commands/build.js

@@ -13,6 +13,7 @@ import { buildIndexWithOverrides, loadFullEntries } from '../../core/assembly/kn
 import { createAdapter } from '../../core/adapters/adapter.js';
 import { ensureScaffoldGitignore, findLegacyGeneratedOutputs } from '../../project/gitignore.js';
 import fs from 'node:fs';
+import { shutdown } from '../shutdown.js';
 const buildCommand = {
     command: 'build',
     describe: 'Generate platform adapter output files',
@@ -35,188 +36,198 @@ const buildCommand = {
     },
 };
 export async function runBuild(argv, options = {}) {
-    const startTime = Date.now();
-    // Step 1: Resolve project root
-    const projectRoot = argv.root ?? findProjectRoot(process.cwd());
-    if (!projectRoot) {
-        process.stderr.write('\u2717 error [PROJECT_NOT_INITIALIZED]: No .scaffold/ directory found\n' +
-            '  Fix: Run `scaffold init` to initialize a project\n');
-        return { exitCode: 1 };
-    }
-    const outputMode = resolveOutputMode(argv);
-    const output = options.output ?? createOutputContext(outputMode);
-    // Step 2: Load config
-    const { config, errors: configErrors } = loadConfig(projectRoot, []);
-    if (configErrors.length > 0) {
-        displayErrors(configErrors, [], output);
-        return { exitCode: 1, errors: configErrors };
-    }
-    if (!config) {
-        output.error('Config not found');
-        return { exitCode: 1 };
-    }
-    // Step 3: Discover meta-prompts from both pipeline/ and tools/ directories
-    const metaPrompts = discoverAllMetaPrompts(getPackagePipelineDir(projectRoot), getPackageToolsDir(projectRoot));
-    const stepNames = [...metaPrompts.keys()];
-    // Step 4: Load presets (optional — failures are non-fatal)
-    try {
-        const methodologyDir = getPackageMethodologyDir(projectRoot);
-        loadAllPresets(methodologyDir, stepNames);
-    }
-    catch (err) {
-        process.stderr.write(`[scaffold] Warning: could not load methodology presets: ${err.message}\n`);
-    }
-    // Step 5: Build dependency graph
-    const graph = buildGraph([...metaPrompts.values()].map(m => m.frontmatter), new Map());
-    // Step 6: Detect cycles
-    const cycles = detectCycles(graph);
-    if (cycles.length > 0) {
-        displayErrors(cycles, [], output);
-        return { exitCode: 1, errors: cycles };
-    }
-    // Step 7: Topological sort (pipeline steps only — tools are excluded from graph)
-    const sorted = topologicalSort(graph);
-    // Append tools (category: 'tool') after pipeline steps — they aren't in the graph
-    const toolSteps = [...metaPrompts.values()]
-        .filter(m => m.frontmatter.category === 'tool')
-        .map(m => m.frontmatter.name)
-        .sort();
-    const enabledSteps = [...sorted, ...toolSteps];
-    // Step 8: Handle --validate-only
-    if (argv['validate-only']) {
-        const validationResult = { valid: true, stepCount: stepNames.length, cycles: 0 };
-        output.success(`Validation passed: ${stepNames.length} steps, no cycles`);
-        if (outputMode === 'json' && !options.suppressFinalResult) {
-            output.result(validationResult);
-        }
-        return { exitCode: 0, data: validationResult };
-    }
-    // Step 9: Load knowledge index
-    const kbIndex = buildIndexWithOverrides(projectRoot, getPackageKnowledgeDir(projectRoot));
-    // Step 9.5: Ensure .gitignore and warn about legacy root output
-    const gitignoreResult = ensureScaffoldGitignore(projectRoot);
-    for (const warning of gitignoreResult.warnings) {
-        output.warn(warning);
-    }
-    const legacyOutputs = findLegacyGeneratedOutputs(projectRoot);
-    if (legacyOutputs.length > 0) {
-        output.warn({
-            code: 'LEGACY_GENERATED_OUTPUTS_PRESENT',
-            message: [
-                `Legacy root Scaffold outputs still exist: ${legacyOutputs.join(', ')}.`,
-                'See README migration instructions.',
-            ].join(' '),
-            context: { count: legacyOutputs.length },
-        });
-    }
-    // Step 10: Build reverse dependency map (step → steps that come after it)
-    const forwardDeps = new Map();
-    for (const [stepName, _node] of graph.nodes) {
-        // Find steps that list this step as a dependency
-        const dependents = [];
-        for (const [otherName, _otherNode] of graph.nodes) {
-            if (otherName === stepName)
-                continue;
-            const otherMeta = metaPrompts.get(otherName);
-            if (otherMeta?.frontmatter.dependencies.includes(stepName)) {
-                dependents.push(otherName);
+    return shutdown.withContext('Cancelled. Partial output may exist. Run `scaffold build` to regenerate.', async () => {
+        const startTime = Date.now();
+        // Step 1: Resolve project root
+        const projectRoot = argv.root ?? findProjectRoot(process.cwd());
+        if (!projectRoot) {
+            process.stderr.write('\u2717 error [PROJECT_NOT_INITIALIZED]: No .scaffold/ directory found\n' +
+                '  Fix: Run `scaffold init` to initialize a project\n');
+            return { exitCode: 1 };
+        }
+        const outputMode = resolveOutputMode(argv);
+        const output = options.output ?? createOutputContext(outputMode);
+        // Step 2: Load config
+        const { config, errors: configErrors } = loadConfig(projectRoot, []);
+        if (configErrors.length > 0) {
+            displayErrors(configErrors, [], output);
+            return { exitCode: 1, errors: configErrors };
+        }
+        if (!config) {
+            output.error('Config not found');
+            return { exitCode: 1 };
+        }
+        // Step 3: Discover meta-prompts from both pipeline/ and tools/ directories
+        const metaPrompts = discoverAllMetaPrompts(getPackagePipelineDir(projectRoot), getPackageToolsDir(projectRoot));
+        const stepNames = [...metaPrompts.keys()];
+        // Step 4: Load presets (optional — failures are non-fatal)
+        try {
+            const methodologyDir = getPackageMethodologyDir(projectRoot);
+            loadAllPresets(methodologyDir, stepNames);
+        }
+        catch (err) {
+            process.stderr.write(`[scaffold] Warning: could not load methodology presets: ${err.message}\n`);
+        }
+        // Step 5: Build dependency graph
+        const graph = buildGraph([...metaPrompts.values()].map(m => m.frontmatter), new Map());
+        // Step 6: Detect cycles
+        const cycles = detectCycles(graph);
+        if (cycles.length > 0) {
+            displayErrors(cycles, [], output);
+            return { exitCode: 1, errors: cycles };
+        }
+        // Step 7: Topological sort (pipeline steps only — tools are excluded from graph)
+        const sorted = topologicalSort(graph);
+        // Append tools (category: 'tool') after pipeline steps — they aren't in the graph
+        const toolSteps = [...metaPrompts.values()]
+            .filter(m => m.frontmatter.category === 'tool')
+            .map(m => m.frontmatter.name)
+            .sort();
+        const enabledSteps = [...sorted, ...toolSteps];
+        // Step 8: Handle --validate-only
+        if (argv['validate-only']) {
+            const validationResult = { valid: true, stepCount: stepNames.length, cycles: 0 };
+            output.success(`Validation passed: ${stepNames.length} steps, no cycles`);
+            if (outputMode === 'json' && !options.suppressFinalResult) {
+                output.result(validationResult);
             }
+            return { exitCode: 0, data: validationResult };
         }
-        forwardDeps.set(stepName, dependents);
-    }
-    // Step 11: Create adapters and generate
-    const configuredPlatforms = config.platforms ?? ['claude-code'];
-    const platforms = [...new Set([...configuredPlatforms, 'universal'])];
-    const allOutputFiles = [];
-    for (const platformId of platforms) {
-        const adapter = createAdapter(platformId);
-        adapter.initialize({
-            projectRoot,
-            methodology: config.methodology ?? 'deep',
-            allSteps: stepNames,
-        });
-        const results = [];
-        for (const stepSlug of enabledSteps) {
-            const meta = metaPrompts.get(stepSlug);
-            if (!meta)
-                continue;
-            // Load full knowledge entries (Summary + Deep Guidance) for self-contained commands
-            const kbNames = meta.frontmatter.knowledgeBase ?? [];
-            const { entries: kbEntries } = loadFullEntries(kbIndex, kbNames);
-            // Build long description: prefer summary, then Purpose section first line, then description
-            const purposeSection = meta.sections['Purpose'] ?? '';
-            const longDescription = meta.frontmatter.summary
-                ?? purposeSection.split('\n')[0]?.trim()
-                ?? meta.frontmatter.description;
-            const input = {
-                slug: stepSlug,
-                description: meta.frontmatter.description,
-                phase: meta.frontmatter.phase,
-                dependsOn: forwardDeps.get(stepSlug) ?? [],
-                produces: meta.frontmatter.outputs,
-                pipelineIndex: enabledSteps.indexOf(stepSlug),
-                body: meta.body,
-                sections: meta.sections,
-                knowledgeEntries: kbEntries.map(e => ({
-                    name: e.name,
-                    description: e.description,
-                    content: e.content,
-                })),
-                conditional: meta.frontmatter.conditional,
-                longDescription,
-            };
-            const stepResult = adapter.generateStepWrapper(input);
-            results.push(stepResult);
-            allOutputFiles.push(...stepResult.files);
-        }
-        const finalizeResult = adapter.finalize({ results });
-        allOutputFiles.push(...finalizeResult.files);
-    }
-    // Step 12: Write output files
-    let generatedCount = 0;
-    for (const file of allOutputFiles) {
-        const fullPath = path.join(projectRoot, file.relativePath);
-        const dir = path.dirname(fullPath);
-        if (!fs.existsSync(dir)) {
-            fs.mkdirSync(dir, { recursive: true });
-        }
-        atomicWriteFile(fullPath, file.content);
-        generatedCount++;
-    }
-    // Step 12.5: Generate resolved skills for plugin auto-discovery
-    const skillTemplateDir = path.join(getPackageRoot(), 'content', 'skills');
-    const skillOutputDir = path.join(getPackageRoot(), 'skills');
-    if (fs.existsSync(skillTemplateDir)) {
-        const claudeVars = { INSTRUCTIONS_FILE: 'CLAUDE.md' };
-        for (const skillName of fs.readdirSync(skillTemplateDir)) {
-            const templatePath = path.join(skillTemplateDir, skillName, 'SKILL.md');
-            if (!fs.existsSync(templatePath))
-                continue;
-            const template = fs.readFileSync(templatePath, 'utf8');
-            const resolved = template.replace(/\{\{(\w+)\}\}/g, (match, key) => claudeVars[key] ?? match);
-            const outDir = path.join(skillOutputDir, skillName);
-            fs.mkdirSync(outDir, { recursive: true });
-            fs.writeFileSync(path.join(outDir, 'SKILL.md'), resolved, 'utf8');
-        }
-    }
-    // Step 13: Report build stats
-    const buildResult = {
-        stepsTotal: stepNames.length,
-        stepsEnabled: enabledSteps.length,
-        platforms,
-        generatedFiles: generatedCount,
-        buildTimeMs: Date.now() - startTime,
-    };
-    if (outputMode === 'json') {
-        if (!options.suppressFinalResult) {
-            output.result(buildResult);
-        }
-    }
-    else {
-        output.success(`Build complete: ${generatedCount} files generated for ${enabledSteps.length} steps`);
-        output.info(`Platforms: ${platforms.join(', ')}`);
-    }
-    return { exitCode: 0, data: buildResult };
+        // Step 9: Load knowledge index
+        const kbIndex = buildIndexWithOverrides(projectRoot, getPackageKnowledgeDir(projectRoot));
+        // Step 9.5: Ensure .gitignore and warn about legacy root output
+        const gitignoreResult = ensureScaffoldGitignore(projectRoot);
+        for (const warning of gitignoreResult.warnings) {
+            output.warn(warning);
+        }
+        const legacyOutputs = findLegacyGeneratedOutputs(projectRoot);
+        if (legacyOutputs.length > 0) {
+            output.warn({
+                code: 'LEGACY_GENERATED_OUTPUTS_PRESENT',
+                message: [
+                    `Legacy root Scaffold outputs still exist: ${legacyOutputs.join(', ')}.`,
+                    'See README migration instructions.',
+                ].join(' '),
+                context: { count: legacyOutputs.length },
+            });
+        }
+        // Step 10: Build reverse dependency map (step → steps that come after it)
+        const forwardDeps = new Map();
+        for (const [stepName, _node] of graph.nodes) {
+            // Find steps that list this step as a dependency
+            const dependents = [];
+            for (const [otherName, _otherNode] of graph.nodes) {
+                if (otherName === stepName)
+                    continue;
+                const otherMeta = metaPrompts.get(otherName);
+                if (otherMeta?.frontmatter.dependencies.includes(stepName)) {
+                    dependents.push(otherName);
+                }
+            }
+            forwardDeps.set(stepName, dependents);
+        }
+        // Step 11: Create adapters and generate
+        const configuredPlatforms = config.platforms ?? ['claude-code'];
+        const platforms = [...new Set([...configuredPlatforms, 'universal'])];
+        const allOutputFiles = [];
+        for (const platformId of platforms) {
+            const adapter = createAdapter(platformId);
+            adapter.initialize({
+                projectRoot,
+                methodology: config.methodology ?? 'deep',
+                allSteps: stepNames,
+            });
+            const results = [];
+            for (const stepSlug of enabledSteps) {
+                const meta = metaPrompts.get(stepSlug);
+                if (!meta)
+                    continue;
+                // Load full knowledge entries (Summary + Deep Guidance) for self-contained commands
+                const kbNames = meta.frontmatter.knowledgeBase ?? [];
+                const { entries: kbEntries } = loadFullEntries(kbIndex, kbNames);
+                // Build long description: prefer summary, then Purpose section first line, then description
+                const purposeSection = meta.sections['Purpose'] ?? '';
+                const longDescription = meta.frontmatter.summary
+                    ?? purposeSection.split('\n')[0]?.trim()
+                    ?? meta.frontmatter.description;
+                const input = {
+                    slug: stepSlug,
+                    description: meta.frontmatter.description,
+                    phase: meta.frontmatter.phase,
+                    dependsOn: forwardDeps.get(stepSlug) ?? [],
+                    produces: meta.frontmatter.outputs,
+                    pipelineIndex: enabledSteps.indexOf(stepSlug),
+                    body: meta.body,
+                    sections: meta.sections,
+                    knowledgeEntries: kbEntries.map(e => ({
+                        name: e.name,
+                        description: e.description,
+                        content: e.content,
+                    })),
+                    conditional: meta.frontmatter.conditional,
+                    longDescription,
+                };
+                const stepResult = adapter.generateStepWrapper(input);
+                results.push(stepResult);
+                allOutputFiles.push(...stepResult.files);
+            }
+            const finalizeResult = adapter.finalize({ results });
+            allOutputFiles.push(...finalizeResult.files);
+        }
+        // Step 12: Write output files
+        let generatedCount = 0;
+        for (const file of allOutputFiles) {
+            if (shutdown.isShuttingDown)
+                break;
+            const fullPath = path.join(projectRoot, file.relativePath);
+            const dir = path.dirname(fullPath);
+            if (!fs.existsSync(dir)) {
+                fs.mkdirSync(dir, { recursive: true });
+            }
+            atomicWriteFile(fullPath, file.content);
+            generatedCount++;
+        }
+        // Step 12.5: Generate resolved skills for plugin auto-discovery
+        const skillTemplateDir = path.join(getPackageRoot(), 'content', 'skills');
+        const skillOutputDir = path.join(getPackageRoot(), 'skills');
+        if (fs.existsSync(skillTemplateDir)) {
+            const claudeVars = { INSTRUCTIONS_FILE: 'CLAUDE.md' };
+            for (const skillName of fs.readdirSync(skillTemplateDir)) {
+                if (shutdown.isShuttingDown)
+                    break;
+                const templatePath = path.join(skillTemplateDir, skillName, 'SKILL.md');
+                if (!fs.existsSync(templatePath))
+                    continue;
+                const template = fs.readFileSync(templatePath, 'utf8');
+                const resolved = template.replace(/\{\{(\w+)\}\}/g, (match, key) => claudeVars[key] ?? match);
+                const outDir = path.join(skillOutputDir, skillName);
+                fs.mkdirSync(outDir, { recursive: true });
+                fs.writeFileSync(path.join(outDir, 'SKILL.md'), resolved, 'utf8');
+            }
+        }
+        // Step 13: Report build stats
+        const buildResult = {
+            stepsTotal: stepNames.length,
+            stepsEnabled: enabledSteps.length,
+            platforms,
+            generatedFiles: generatedCount,
+            buildTimeMs: Date.now() - startTime,
+        };
+        // If shutdown interrupted the build, return early without success message
+        if (shutdown.isShuttingDown) {
+            return { exitCode: 1, data: buildResult };
+        }
+        if (outputMode === 'json') {
+            if (!options.suppressFinalResult) {
+                output.result(buildResult);
+            }
+        }
+        else {
+            output.success(`Build complete: ${generatedCount} files generated for ${enabledSteps.length} steps`);
+            output.info(`Platforms: ${platforms.join(', ')}`);
+        }
+        return { exitCode: 0, data: buildResult };
+    }); // end withContext
 }
 export default buildCommand;
 //# sourceMappingURL=build.js.map