@tyroneross/navgator 0.2.2 → 0.9.0

package/dist/storage.d.ts

@@ -2,7 +2,22 @@
  * NavGator Storage System
  * File-based persistence for components and connections
  */
-import { ArchitectureComponent, ArchitectureConnection, ArchitectureIndex, ConnectionGraph, NavGatorConfig, NavHashes, FileHashRecord, FileChangeResult } from './types.js';
+import { ArchitectureComponent, ArchitectureConnection, ArchitectureIndex, ConnectionGraph, NavGatorConfig, NavHashes, FileHashRecord, FileChangeResult, TimelineEntry, GitInfo } from './types.js';
+/**
+ * Backfill stable_id on a component if missing.
+ * Idempotent — returns the same component reference (mutated in place).
+ * Path-disambiguation is opt-in per-type: types where (type,name) is
+ * naturally unique (npm/pip packages, frameworks, services, llm providers,
+ * databases, infra, queues, configs) use name-only. Types that can repeat
+ * the same name across different files (api-endpoint, db-table, prompt,
+ * worker, component, cron) include canonical_path.
+ */
+/**
+ * Public re-export of ensureStableId. Callers (e.g. the scanner during
+ * incremental merge) need to populate stable_ids on freshly-scanned
+ * in-memory components BEFORE merging with disk-loaded survivors.
+ */
+export declare function ensureStableIdPublic(c: ArchitectureComponent): ArchitectureComponent;
 /**
  * Store a component to disk
  */
@@ -15,7 +30,14 @@ export declare function storeComponent(component: ArchitectureComponent, config?
  */
 export declare function loadComponent(componentId: string, config?: NavGatorConfig, projectRoot?: string): Promise<ArchitectureComponent | null>;
 /**
- * Load all components (parallelized for efficiency)
+ * Load all components.
+ *
+ * R6: per-entity files are opt-in (default off). When they're absent or
+ * empty, falls back to the consolidated `components.full.jsonl` written
+ * by the scanner. This keeps every existing reader (MCP tools, CLI
+ * commands, audit, summary) working unchanged.
+ *
+ * Read priority: components/ dir → components.full.jsonl → [].
  */
 export declare function loadAllComponents(config?: NavGatorConfig, projectRoot?: string): Promise<ArchitectureComponent[]>;
 /**
@@ -34,7 +56,11 @@ export declare function storeConnection(connection: ArchitectureConnection, conf
  */
 export declare function loadConnection(connectionId: string, config?: NavGatorConfig, projectRoot?: string): Promise<ArchitectureConnection | null>;
 /**
- * Load all connections (parallelized for efficiency)
+ * Load all connections.
+ *
+ * R6: per-entity files are opt-in (default off). When they're absent or
+ * empty, falls back to the consolidated `connections.full.jsonl` written
+ * by the scanner. Same read-priority as loadAllComponents.
  */
 export declare function loadAllConnections(config?: NavGatorConfig, projectRoot?: string): Promise<ArchitectureConnection[]>;
 /**
@@ -44,7 +70,10 @@ export declare function deleteConnection(connectionId: string, config?: NavGator
 /**
  * Build and save the index from current components and connections
  */
-export declare function buildIndex(config?: NavGatorConfig, projectRoot?: string, projectMetadata?: Partial<import('./types.js').ProjectMetadata>): Promise<ArchitectureIndex>;
+export declare function buildIndex(config?: NavGatorConfig, projectRoot?: string, projectMetadata?: Partial<import('./types.js').ProjectMetadata>, data?: {
+    components: ArchitectureComponent[];
+    connections: ArchitectureConnection[];
+}): Promise<ArchitectureIndex>;
 /**
  * Load the index
  */
@@ -52,12 +81,22 @@ export declare function loadIndex(config?: NavGatorConfig, projectRoot?: string)
 /**
  * Build the connection graph
  */
-export declare function buildGraph(config?: NavGatorConfig, projectRoot?: string): Promise<ConnectionGraph>;
+export declare function buildGraph(config?: NavGatorConfig, projectRoot?: string, data?: {
+    components: ArchitectureComponent[];
+    connections: ArchitectureConnection[];
+}): Promise<ConnectionGraph>;
 /**
  * Build a map of file paths → component IDs for fast lookup in hooks.
  * Sources: component config_files + connection code_reference files + connection locations.
  */
-export declare function buildFileMap(config?: NavGatorConfig, projectRoot?: string): Promise<Record<string, string>>;
+export declare function buildFileMap(config?: NavGatorConfig, projectRoot?: string, data?: {
+    components: ArchitectureComponent[];
+    connections: ArchitectureConnection[];
+}): Promise<Record<string, string>>;
+/**
+ * Load the file map (file path → component ID)
+ */
+export declare function loadFileMap(config?: NavGatorConfig, projectRoot?: string): Promise<Record<string, string>>;
 /**
  * Save prompt scan results to prompts.json
  */
@@ -86,7 +125,10 @@ export declare function buildSummary(config?: NavGatorConfig, projectRoot?: stri
     summary: {
         totalPrompts: number;
     };
-}, projectMetadata?: Partial<import('./types.js').ProjectMetadata>): Promise<string>;
+}, projectMetadata?: Partial<import('./types.js').ProjectMetadata>, latestDiff?: TimelineEntry, gitInfo?: GitInfo, data?: {
+    components: ArchitectureComponent[];
+    connections: ArchitectureConnection[];
+}): Promise<string>;
 /**
  * Load the graph
  */
@@ -99,13 +141,43 @@ export declare function createSnapshot(reason?: string, config?: NavGatorConfig,
     file_path: string;
 }>;
 /**
- * Store multiple components at once (parallelized for efficiency)
+ * Store multiple components at once (parallelized for efficiency).
+ *
+ * R6 footprint fix: writes are gated on `config.perEntityFiles` (default
+ * false). When disabled, the consolidated `graph.json`, `index.json`,
+ * `file_map.json`, and `connections.jsonl` are the source of truth and we
+ * skip the per-entity file explosion (~2,475 files × ~3KB each on
+ * atomize-ai). Component IDs are still stamped onto the in-memory objects
+ * so callers (graph builder, index writer) get stable IDs.
  */
 export declare function storeComponents(components: ArchitectureComponent[], config?: NavGatorConfig, projectRoot?: string): Promise<void>;
 /**
- * Store multiple connections at once (parallelized for efficiency)
+ * Store multiple connections at once (parallelized for efficiency).
+ *
+ * R6 footprint fix: writes are gated on `config.perEntityFiles` (default
+ * false). When disabled, `connections.jsonl` + `reverse-deps.json` are the
+ * source of truth and we skip the per-edge file explosion (~6,737 files
+ * on atomize-ai).
  */
 export declare function storeConnections(connections: ArchitectureConnection[], config?: NavGatorConfig, projectRoot?: string): Promise<void>;
+/**
+ * R6 footprint fix: idempotent migration that removes legacy per-entity
+ * JSON files when `perEntityFiles` is disabled (the default).
+ *
+ * Safety: this NEVER deletes the consolidated files (graph.json, index.json,
+ * file_map.json, connections.jsonl, reverse-deps.json, NAVSUMMARY*.md,
+ * hashes.json, timeline.json, etc.). It only touches the contents of the
+ * `components/` and `connections/` subdirectories and removes those
+ * directories themselves once empty. If `perEntityFiles` is true, this is
+ * a no-op.
+ *
+ * Returns a count summary for caller logging.
+ */
+export declare function migratePerEntityFiles(config: NavGatorConfig | undefined, projectRoot: string | undefined): Promise<{
+    componentsRemoved: number;
+    connectionsRemoved: number;
+    dirsRemoved: number;
+}>;
 /**
  * Clear all stored data (parallelized for efficiency)
  */
@@ -140,6 +212,150 @@ export declare function loadHashes(config?: NavGatorConfig, projectRoot?: string
  * Detect which files have changed since last scan
  */
 export declare function detectFileChanges(currentFiles: string[], projectRoot: string, config?: NavGatorConfig): Promise<FileChangeResult>;
+/**
+ * Atomically write a string to disk. Writes to `<target>.tmp` first, then
+ * renames over `<target>`. fs.rename is atomic on POSIX within the same
+ * filesystem, so a crashed mid-write leaves the prior file intact.
+ *
+ * Use this for any file that must remain readable during/after a scan
+ * (index.json, graph.json, file_map.json, NAVSUMMARY.md, hashes.json).
+ */
+export declare function atomicWriteFile(target: string, content: string, encoding?: BufferEncoding): Promise<void>;
+/**
+ * Atomically write a JSON-serializable value to disk (pretty-printed).
+ */
+export declare function atomicWriteJSON(target: string, value: unknown): Promise<void>;
+/**
+ * Clear only the components and connections whose source files overlap
+ * `changedPaths`. Used by incremental scans so we re-emit just the touched
+ * subset and merge the rest by stable_id.
+ *
+ * - For components: a component is cleared if any of its `source.config_files`
+ *   appears in `changedPaths`.
+ * - For connections: a connection is cleared if its `code_reference.file`
+ *   appears in `changedPaths`. (We do NOT delete based on the target's
+ *   source files — that would over-clear.)
+ *
+ * Survivors stay on disk and get merged with new incoming data via
+ * mergeByStableId.
+ */
+export declare function clearForFiles(config: NavGatorConfig | undefined, projectRoot: string | undefined, changedPaths: Set<string>): Promise<{
+    componentsCleared: number;
+    connectionsCleared: number;
+}>;
+/**
+ * Merge two arrays by stable_id, keeping the incoming entry on collision
+ * (incoming wins because it's the freshly-scanned version of that entity).
+ *
+ * Generic over T because we use it for both components (keyed by stable_id)
+ * and connections (keyed by composite from|to|type|file:line). Caller
+ * supplies the key picker.
+ */
+export declare function mergeByStableId<T>(existing: T[], incoming: T[], pickKey: (t: T) => string): T[];
+/**
+ * Load only the connections whose target component's source files include
+ * any path in `changedFiles`. Returns the set of FROM-side source files —
+ * i.e. files that import / depend on something in changedFiles.
+ *
+ * This is the reverse-dependency walk used by selectScanMode to widen the
+ * incremental walk-set so changes to a leaf module re-scan the modules
+ * that depend on it.
+ *
+ * Single-level only. Acceptable for Run 1; deeper transitivity is part of
+ * Run 2's SQC audit layer.
+ *
+ * ALIASED IMPORTS (Run 1.6 — item #7 verify): connection target paths are
+ * stored as RESOLVED, project-relative paths. The import scanner
+ * (`src/scanners/connections/import-scanner.ts:resolveImport`) maps tsconfig
+ * `paths` aliases (e.g. `@/utils/foo`) and `~/`-style aliases to actual file
+ * paths (`src/utils/foo.ts`) before constructing the connection. This means
+ * matching `changedFiles` against `code_reference.file` and the target
+ * component's `source.config_files` is correct without alias-aware
+ * normalization here. See `aliased-imports` test fixture for the regression
+ * lock.
+ *
+ * RUN 1.6 — ITEM #8: This function now reads a derived
+ * `.navgator/architecture/reverse-deps.json` index when present (single file
+ * open per scan). Falls back to the per-edge JSON walk if the index file is
+ * missing, corrupt, or schema-mismatched.
+ */
+export declare function loadReverseDeps(changedFiles: Set<string>, config: NavGatorConfig | undefined, projectRoot: string | undefined): Promise<Set<string>>;
+/**
+ * Legacy reverse-deps walk: opens every per-edge connection JSON. Retained
+ * as the fallback when `reverse-deps.json` is missing, corrupt, or
+ * schema-mismatched. Also useful as the regression baseline for the index.
+ */
+export declare function loadReverseDepsLegacy(changedFiles: Set<string>, config: NavGatorConfig | undefined, projectRoot: string | undefined): Promise<Set<string>>;
+/**
+ * Reverse-deps index file shape (Run 1.6 — item #8).
+ * Stored at `.navgator/architecture/reverse-deps.json`. Computed from the
+ * in-memory connection set at scan end (no per-edge file walk).
+ *
+ * `edges[target_file]` is the list of source files that reference (import,
+ * call, depend on) `target_file`.
+ */
+export interface ReverseDepsIndex {
+    schema_version: '1.0.0';
+    generated_at: number;
+    edges: Record<string, string[]>;
+}
+/**
+ * Build and atomically write `.navgator/architecture/reverse-deps.json` from
+ * the in-memory connection set + components. This avoids re-walking per-edge
+ * JSON files on the next incremental scan.
+ *
+ * Run 1.6 — item #8: HEADLINE PERF WIN. On atomize-ai's 4,570 connections,
+ * this drops `loadReverseDeps` from ~4,570 file opens to 1.
+ */
+export declare function buildReverseDepsIndex(components: ArchitectureComponent[], connections: ArchitectureConnection[], config: NavGatorConfig | undefined, projectRoot: string | undefined): Promise<{
+    path: string;
+    edge_count: number;
+}>;
+/**
+ * Derived-artifact manifest shape (Run 1.6 — item #9).
+ * Stored at `.navgator/architecture/manifest.json`. Lists the derived files
+ * (graph.json, file_map.json, reverse-deps.json, index.json) with their
+ * generation timestamps so future scans can detect stale derivations.
+ *
+ * Reading is OPTIONAL — existing consumers ignore the manifest. Writing it
+ * is cheap and unlocks future incremental optimizations.
+ */
+export interface DerivedManifest {
+    schema_version: '1.0.0';
+    generated_at: number;
+    files: Record<string, {
+        generated_at: number;
+        source_count?: number;
+    }>;
+}
+/**
+ * Atomically write `.navgator/architecture/manifest.json` describing the
+ * derived artifacts NavGator just emitted. Best-effort — the scan succeeds
+ * even if this fails.
+ */
+export declare function buildDerivedManifest(config: NavGatorConfig | undefined, projectRoot: string | undefined, details: {
+    reverseDepsEdgeCount?: number;
+}): Promise<{
+    path: string;
+}>;
+/**
+ * Run an integrity check on the post-merge state.
+ * - Every connection endpoint (from + to component_id) must exist in
+ *   the components set, OR be a FILE:-prefixed unresolved ref.
+ * - Every component's source.config_files must exist on disk
+ *   (relative to projectRoot). Missing files → orphan component.
+ * - Optional walkSet narrows the source-file existence check to
+ *   files in the walk-set; full-scan callers pass an empty set
+ *   (means "check all").
+ *
+ * Returns ok=false on any failure with a list of issue strings.
+ * Caller is expected to log scan_type='incremental→full' and
+ * fall through to a full scan on failure.
+ */
+export declare function runIntegrityCheck(components: ArchitectureComponent[], connections: ArchitectureConnection[], projectRoot: string, walkSet?: Set<string>): Promise<{
+    ok: boolean;
+    issues: string[];
+}>;
 /**
  * Get a summary of file changes for display
  */

package/dist/storage.d.ts.map

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