@skaile/workspaces 5.15.1 → 5.16.0

package/CHANGELOG.md

@@ -1,5 +1,59 @@
 # Changelog
 
+## 5.16.0
+
+### Minor Changes
+
+- [#1079](https://github.com/skaile-ai/workspaces/pull/1079) [`4db3b13`](https://github.com/skaile-ai/workspaces/commit/4db3b138138faf5e6754a68d017a1a8265621bfd) Thanks [@mortegro](https://github.com/mortegro)! - `validate`, `library index` and `library publish` give one verdict per authoring case.
+
+  - A manifest entry with `root: .` or an empty root fails all three with `an asset needs its own directory`, instead of an index parse error on `.gitignore` (p870).
+  - `library index` keeps a flow whose `id:` differs from its file name out of the manifest and the index (no `Renamed manifest entry`), and `add` refuses such a flow (p871).
+  - The secret check and the scaffold `.gitignore` cover `.npmrc`, `.netrc`, `.envrc`, `credentials` and `token.json` (p872).
+  - The semver error for a part of more than 15 digits names the 15-digit limit (p873).
+  - `library init` exits 1 and registers nothing for a project folder with deployed copies (p875) and for a `skaile.manifest.yaml` that does not parse (p915).
+  - `library index` fails an untouched scaffold for all six kinds, as `validate` does; the prompt line reads `write the prompt text` (p1020).
+  - `metadata.tags`, `metadata.requires` and `metadata.prerequisites` in their schema shapes (array, array, object) are no conformance finding; the factory skills pass `validate --strict-conformance` (p1027, p853).
+  - `validate` of a directory without a manifest refuses a symlink to an asset directory (p520).
+  - A `composes:` ref that neither the library nor a registered library of its publisher holds is an error in `validate`, `library index` and the publish plan (p415).
+  - `add`, `install` and `update` print `! <ref> body is still the scaffold placeholder` for a deployed library asset with an untouched body (p926).
+
+- [#1079](https://github.com/skaile-ai/workspaces/pull/1079) [`4db3b13`](https://github.com/skaile-ai/workspaces/commit/4db3b138138faf5e6754a68d017a1a8265621bfd) Thanks [@mortegro](https://github.com/mortegro)! - `skaile remove` and `add` respect who owns a folder and keep unrelated state.
+
+  - `remove` deletes a deployed folder only when its own lock entry (publisher, kind and name) owns it. For a ref whose folder another publisher's lock entry holds, it drops the declaration, keeps the folder and names the owner (p57, p720).
+  - A dangling symlink at the asset path counts as an unowned path: `add` refuses to replace it without `--force`, `remove` keeps it (p892).
+  - `install` without a lock adopts an agent file whose bytes equal what skaile renders from the agent, as it does for skill folders (p913).
+  - `add` warns `Same version, different content` when two libraries hold a ref at one version with different bytes; the default library still wins (p927).
+  - `install --locked` in a project with no dependencies prints `Nothing to install` and exits 0 (p944).
+  - `remove` of the last mcp-server drops its `.mcp.json` entry at once and deletes `.mcp.json` and `.skaile/mcp-managed.json` when nothing else is left in them (p963).
+  - `remove agent:<ref>` keeps the other `agents.<id>` bindings and the agents they declare (p982).
+  - `add` of an asset a reader source does not list says to add it to `skaile.manifest.yaml` in the source repo and push; `library index <reader>` exits 1 without editing the clone (p1026).
+  - `add bundle:@acme/x` prints `Error: asset kind "bundle" no longer exists …` instead of the class name (p1032).
+
+- [#1079](https://github.com/skaile-ai/workspaces/pull/1079) [`4db3b13`](https://github.com/skaile-ai/workspaces/commit/4db3b138138faf5e6754a68d017a1a8265621bfd) Thanks [@mortegro](https://github.com/mortegro)! - omp one-shot output and model endpoint (p980, p1003, p1004, p1005, p1006, p1007, p1008). `skaile run --driver omp` prints the whole answer: the text in omp's `message_start` is now the first delta, not dropped. The omp driver merges `config.env` over its base env, so `serve --driver omp --model-endpoint` keeps `PATH`. The model endpoint finds `@earendil-works/pi-ai` in the project first, and `serve` names both places it looked in before the ready line. A model with an unknown provider prefix answers 404 `model_not_found` and lists the providers. A busy `--model-endpoint` port is one line. The public types of `@skaile/workspaces/model-endpoint` compile without pi-ai. `skaile serve` prints a `ws://` line when it listens.
+
+- [#1079](https://github.com/skaile-ai/workspaces/pull/1079) [`4db3b13`](https://github.com/skaile-ai/workspaces/commit/4db3b138138faf5e6754a68d017a1a8265621bfd) Thanks [@mortegro](https://github.com/mortegro)! - Protocol guarantees and agent runs (p1000, p1001, p1002, p410, p421 of the 5.15.0 critique). `access: read-only` now blocks every write path of a mount: a host `resource_request` `write`, `write_range`, `mkdir` or `delete` answers `Connector "<id>" is read-only` (before, only the agent tool path checked it). A mount resolves symlinks and refuses a target whose real path is outside the mount (`Path escapes the mount through a symlink`); a link to a folder inside the mount lists as `directory`. `runner.set_state` is implemented: it writes a key of a shared-state store declared in `session_init.sharedState` and the store answers `state_changed`; an id `session_init.sharedState` did not declare answers `store_not_found`, also for a live flow or user connector. An agent added from a local library that `composes:` a library skill (or another library asset) now runs and dry-runs without a `sources:` clone: the content source reads a locked library asset from the registered library its lock entry records (by name, else by remote URL), and the pinned hash still decides between run and `composition_conflict`. `skaile run --instance <id>` and `skaile repl --instance <id>` start a named `agents:` instance with its overrides (its `model.preferred`, unless `--model` is given, and its `budget.max_turns` / `permissions.max_turns`); an unknown id exits 1 and lists the declared ones. `permissions.permission_mode: interactive` is honoured: claude-sdk runs under `default` and asks before each tool call it does not auto-allow (`repl` and a terminal `run` prompt `y/N`, `serve` clients get a `question` event with an `approval` card, an unanswerable session refuses); codex (standalone) uses `approvalPolicy: on-request` and refuses a command that needs to leave its sandbox, since it cannot show an approval card.
+
+- [#1079](https://github.com/skaile-ai/workspaces/pull/1079) [`4db3b13`](https://github.com/skaile-ai/workspaces/commit/4db3b138138faf5e6754a68d017a1a8265621bfd) Thanks [@mortegro](https://github.com/mortegro)! - Project state commands: no stack traces, no hidden drift. `show`, `rebuild`, `clean` and `info` print one `✗` line for a `skaile.yaml` that does not parse (p910) and for a library asset whose version is not semver (p874). An extra file in the deployed copy of a source- or store-origin asset is drift for `check`, `doctor`, `outdated` and `diff`, and `install --locked` prints `Removed <file>` when it deletes one (p964). `outdated` lists a `0.0.0-sha.<commit>` source lock key whose file now declares a version as `re-key (a → b)` (p914). `diff agent:<ref>` renders and compares the agent instances bound to the ref, and `check` names the instance of an edited instance file (p925). After `library rename`, `outdated` names the locked library on the left of `origin changes` (p890), and the next `install` locks the library under its new name (p893). `search` lists a source asset in the version `add` locks (p855). `remove` leaves the `sources:` rows of the lock as the next `install` builds them, so that `install` does not rewrite a clean lock (p790).
+
+- [#1079](https://github.com/skaile-ai/workspaces/pull/1079) [`4db3b13`](https://github.com/skaile-ai/workspaces/commit/4db3b138138faf5e6754a68d017a1a8265621bfd) Thanks [@mortegro](https://github.com/mortegro)! - Store and source consumption.
+
+  - A failed `update` catalog refresh keeps the cached catalog; the cache is replaced only after the new list arrived (p960).
+  - `store show <ref>#<missing version>` says `<name> has version(s): …`, and no longer asks for a "full ref" when the ref is full (p962).
+  - `verify` reports a deployed copy that differs from the lock, compares a store asset with the store's install manifest, and names the reason when it cannot (p965).
+  - A skipped MCP server is warned about once per reason, not on every `add`, `install` and `update` (p966).
+  - A `--publisher` source asset has one ref, `kind:@<declared publisher>/<name>`; the library-name slug is refused with a hint. A source asset without a version is `0.0.0-sha.<commit>` in `search`, `info`, `add` and the lock; `add …#0.1.0` fails and names it (p967).
+  - An ES-module `server.js` payload of a store MCP server gets a `package.json` with `"type": "module"`, so the `node` command in `.mcp.json` starts it (p971).
+  - A source URL has one spelling (trailing slash dropped, scheme and host lower-cased): `source add …/r.git/` is the source `…/r.git` already is, and the `--publisher` guard cannot be bypassed with it (p722, p891).
+  - A source made under the key a `….git/` URL had before is found by its old clone path, the url its library row records, and its old curated-manifest slug: `source sync` moves the row, the manifest still applies, and `source remove` drops the row (p891).
+  - A version-less asset of a source clone has one version, `0.0.0-sha.<commit>`, also when it comes from the shared reader library in a project without `sources:`: `install --locked` and `check` accept what `add` locked. A pin on that version is accepted even when the commit is all digits with a leading zero (p967).
+  - `source add` and `source sync` print the notes about files outside the asset filter as one line with a count; `--verbose` lists them (p1031).
+
+### Patch Changes
+
+- [#1079](https://github.com/skaile-ai/workspaces/pull/1079) [`4db3b13`](https://github.com/skaile-ai/workspaces/commit/4db3b138138faf5e6754a68d017a1a8265621bfd) Thanks [@mortegro](https://github.com/mortegro)! - Docs and factory skills match the CLI (p1021, p1023, p1024, p1025, p1028, p1029, p1030 and 37 doc defects of the 5.15.0 critique). The factory skills `authoring-skaile-assets`, `authoring-skaile-manifests` and `skailify` now say what the CLI does: a `name:` that differs from `assets[].name` fails `validate` and `library index` renames the entry; an asset on disk but not in the manifest fails `add` with `is in library "<lib>" but not listed in its skaile.manifest.yaml`; `sources[]` is `{url, pin?, publisher?}`; a second `asset import` fails with `Destination already exists`. `docs/CURRICULUM.md` is labelled a blueprint and uses real commands, the three workspace-plugin pages use `skaile add skill:@skaile-ai/use-exa`, `commands/index.md` lists every command, and the resolver page no longer presents `skip_checks` as a flow-file feature.
+
+- [#1079](https://github.com/skaile-ai/workspaces/pull/1079) [`4db3b13`](https://github.com/skaile-ai/workspaces/commit/4db3b138138faf5e6754a68d017a1a8265621bfd) Thanks [@mortegro](https://github.com/mortegro)! - Harness rough edges (p940, p941, p942, p943, p945, p981, p1022, p1033, p911, p912, p744, p591, p598, p811, p428). `integration install --driver codex` marks the project trusted in `~/.codex/config.toml`, and `integration status` says `untrusted` when it is not. The claude-sdk driver no longer prints the SDK warning `CLAUDE_SDK_CAN_USE_TOOL_SHADOWED`. An unknown `--driver` of `integration` is one line. `run --dry-run` rejects a model the driver refuses. The repl banner lists the deployed agents. A Claude alias in `model.preferred` is not sent to codex or omp. `config set driver` validates the name; `config get --global` reads the personal file. `check`, `doctor` and `clean` take `--global`. `add --global --harness` is remembered per entry. The omp private home is deleted at exit and old ones are swept. A driver failure is printed once in `repl`. `add agent:` with a delegate under codex prints one line about it. `integration install --full` ignores the per-machine `.claude` files. `run` and `repl` load the project's declared `plugins:` before resolving `--driver`. `remove --global` and `clean --global` never delete an old omp folder an earlier sweep kept.
+
 ## 5.15.1
 
 ### Patch Changes

package/dist/{asset-feeds-FVDNQ2FM.js → asset-feeds-BELBSJEE.js}

@@ -1,28 +1,28 @@
-import { storeNotInstallableReason } from './chunk-ESXZJP4M.js';
-import { getKnownKinds } from './chunk-YUURCZWY.js';
-import './chunk-N36S36OZ.js';
+import { storeNotInstallableReason } from './chunk-WXWQNJCT.js';
+import { getKnownKinds } from './chunk-2SKPPIV7.js';
+import './chunk-SPV2CXJ3.js';
 import './chunk-X3RMRJNR.js';
 import './chunk-7RGTAEG6.js';
 import './chunk-NUELZWCF.js';
-import './chunk-OOQ5Q75W.js';
-import './chunk-NKDSU4Q7.js';
-import './chunk-KRRHADE7.js';
+import './chunk-D3PU3C6F.js';
+import './chunk-ES6ARJPQ.js';
+import './chunk-SXWGLW23.js';
 import './chunk-BFMYYNDT.js';
 import './chunk-3TXEJN4W.js';
-import './chunk-MGM5EJQQ.js';
-import './chunk-4QINFQ27.js';
+import './chunk-YK3XLEQJ.js';
+import './chunk-PIC23DDE.js';
 import './chunk-4GY63JU6.js';
-import { factoryAssetRoots } from './chunk-X7DIT65W.js';
+import { factoryAssetRoots } from './chunk-5RDZ5JHH.js';
 import './chunk-D54T2F54.js';
 import './chunk-5BEFNLOR.js';
 import './chunk-A2ULN3KX.js';
-import { scanRepo } from './chunk-J76LDUDS.js';
+import { scanRepo } from './chunk-ZVZTCDUN.js';
 import './chunk-L5VSIPQD.js';
 import './chunk-IG5LZ3WU.js';
-import './chunk-ANSZULXH.js';
+import './chunk-H7R7R5BN.js';
 import './chunk-RVRB27AN.js';
-import { parseRequires } from './chunk-SP5NGNBV.js';
-import './chunk-VY6NTFE7.js';
+import { parseRequires } from './chunk-YW2BNDSE.js';
+import './chunk-FT4ZHLYR.js';
 import './chunk-ICSCSM5D.js';
 import './chunk-DKXNKFKP.js';
 import './chunk-MJHSLODD.js';
@@ -52,8 +52,8 @@ function libraryEntryOf(asset) {
 async function libraryAssets() {
   const notes = [];
   try {
-    const { openLibraryManager } = await import('./open-library-JJGDEYYT.js');
-    const { getKindRegistry } = await import('./open-registry-X6YQVP7V.js');
+    const { openLibraryManager } = await import('./open-library-YSUGNP36.js');
+    const { getKindRegistry } = await import('./open-registry-YPRQDUMK.js');
     const { scanAuthoringLibraries } = await import('./library/index.js');
     const { library: index, close } = await openLibraryManager();
     try {
@@ -86,7 +86,7 @@ async function libraryAssets() {
 async function storeAssets(projectDir) {
   const notes = [];
   try {
-    const { resolveCatalogSource } = await import('./open-library-JJGDEYYT.js');
+    const { resolveCatalogSource } = await import('./open-library-YSUGNP36.js');
     const { source, close } = await resolveCatalogSource({ projectDir });
     try {
       const assets = (await source.listAssets()).filter(
@@ -167,5 +167,5 @@ async function gatherAssetFeeds(am, projectDir) {
 }
 
 export { gatherAssetFeeds };
-//# sourceMappingURL=asset-feeds-FVDNQ2FM.js.map
-//# sourceMappingURL=asset-feeds-FVDNQ2FM.js.map
+//# sourceMappingURL=asset-feeds-BELBSJEE.js.map
+//# sourceMappingURL=asset-feeds-BELBSJEE.js.map

package/dist/{asset-feeds-FVDNQ2FM.js.map → asset-feeds-BELBSJEE.js.map}

@@ -1 +1 @@
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* asset-feeds.ts — gather installable assets from every feed the manage TUI\n * surfaces.\n *\n * Four feeds, normalized into `CatalogEntry`:\n * - **Project sources** — `skaile.yaml` `sources:` entries (scanned via\n *   `AssetManager.search()`; the new `sources:` field is merged into the\n *   legacy repositories map in `AssetManager.loadConfig`).\n * - **Local libraries** — user authoring places from `LocalIndex`, read through\n *   `scanAuthoringLibraries` (`@skaile/workspaces/library`): the same scan\n *   `library index` / `search --local` use, so publishers and refs match them\n *   (per-asset `publisher_overrides` honoured), `dev_paths` assets are left out,\n *   and a library that fails to scan becomes one note while the rest stay listed.\n * - **Factory assets** — the bundled first-party `factory-assets` tree\n *   (`factoryAssetRoots()`), scanned from disk. Always present; no network.\n * - **Remote store** — the configured catalog source when `catalog.url` is\n *   not `local`. Failures are non-fatal — they surface as notes.\n */\n\nimport * as path from \"node:path\";\nimport {\n  type AssetKind,\n  type CatalogEntry,\n  factoryAssetRoots,\n  parseRequires,\n  scanRepo,\n} from \"@skaile/workspaces/core\";\nimport { getKnownKinds } from \"./open-registry.ts\";\nimport { storeNotInstallableReason } from \"./store-addable.ts\";\nimport type { DiscoveredAsset } from \"@skaile/workspaces/discovery\";\n\n/** One non-fatal note returned to the caller for surfacing in the UI. */\nexport interface FeedNote {\n  feed: \"sources\" | \"libraries\" | \"store\" | \"factory\";\n  message: string;\n}\n\n/**\n * Which feed an asset came from. This is the top-level grouping axis in the\n * manage TUI (\"where is this skill coming from?\") and is intentionally distinct\n * from `publisher` (asset-intrinsic identity): the same publisher can legitimately\n * appear under more than one origin (e.g. a github repo you added as a `source`\n * that is also listed in the remote `store`).\n */\nexport type AssetOrigin = \"source\" | \"library\" | \"factory\" | \"store\";\n\n/** A catalog entry tagged with the feed it was gathered from. */\nexport interface OriginEntry {\n  origin: AssetOrigin;\n  entry: CatalogEntry;\n  /**\n   * Second-level grouping label for the manage tree. Defaults (when unset) to the\n   * entry's `publisher`; the source feed sets it to the source's short repo name\n   * so the Sources band groups by source — \"which repo did this come from\" — not\n   * by the asset-intrinsic publisher.\n   */\n  group?: string;\n}\n\nexport interface AssetFeedResult {\n  entries: OriginEntry[];\n  notes: FeedNote[];\n}\n\n/**\n * Map one discovered library asset to the `CatalogEntry` the manage rows read.\n * `publisher` is the bare per-asset publisher (what `search --local` prints),\n * `source` the manifest path. `repo` is left unset: it only feeds the Sources-tree\n * org grouping. `requires` / `dependencies` come from the manifest the way the\n * scanner fills them — string `requires:` refs parsed to `{kind, name}`, a bundle's\n * string `dependencies:` list verbatim.\n */\nfunction libraryEntryOf(asset: DiscoveredAsset): CatalogEntry {\n  const { manifest } = asset;\n  const nested = (manifest.metadata as Record<string, unknown> | undefined)?.requires;\n  const rawRequires = manifest.requires ?? nested;\n  const requireRefs =\n    typeof rawRequires === \"string\"\n      ? rawRequires\n      : Array.isArray(rawRequires)\n        ? rawRequires.filter((r): r is string => typeof r === \"string\")\n        : undefined;\n  const deps = manifest.dependencies;\n  return {\n    name: asset.name,\n    kind: asset.kind as AssetKind,\n    description: typeof manifest.description === \"string\" ? manifest.description : \"\",\n    source: asset.manifestPath,\n    publisher: asset.publisher,\n    ...(asset.plugin ? { plugin: asset.plugin } : {}),\n    version: asset.version,\n    requires: requireRefs === undefined ? [] : parseRequires({ requires: requireRefs }),\n    dependencies:\n      asset.kind === \"bundle\" && Array.isArray(deps)\n        ? deps.filter((d): d is string => typeof d === \"string\" && d.length > 0)\n        : [],\n  };\n}\n\n/**\n * Pull assets from local libraries (the authoring places under\n * `~/.skaile/libraries/<name>/`, not the `~/.skaile/cache/sources/` cache) through\n * `scanAuthoringLibraries`, grouped under the bare library name\n * (`group: <name>`) so the manage TUI shows a clean `<name>` band — no\n * `library:` prefix (mirrors the source feed). Plugin grouping (`entry.plugin`)\n * comes from `DiscoveredAsset.plugin`. A library whose scan fails becomes one\n * `FeedNote`; the outer `catch` covers only opening the index.\n */\nasync function libraryAssets(): Promise<{\n  entries: OriginEntry[];\n  notes: FeedNote[];\n}> {\n  const notes: FeedNote[] = [];\n  try {\n    // Lazy: the library subpath pulls in SQLite, which the other feeds never need.\n    const { openLibraryManager } = await import(\"./open-library.ts\");\n    const { getKindRegistry } = await import(\"./open-registry.ts\");\n    const { scanAuthoringLibraries } = await import(\"@skaile/workspaces/library\");\n    const { library: index, close } = await openLibraryManager();\n    try {\n      const entries: OriginEntry[] = [];\n      for (const scan of await scanAuthoringLibraries(index, getKindRegistry())) {\n        if (scan.error !== undefined) {\n          notes.push({ feed: \"libraries\", message: `${scan.library.name}: ${scan.error}` });\n          continue;\n        }\n        for (const asset of scan.assets) {\n          entries.push({\n            origin: \"library\",\n            entry: libraryEntryOf(asset),\n            group: scan.library.name,\n          });\n        }\n      }\n      return { entries, notes };\n    } finally {\n      close();\n    }\n  } catch (err) {\n    notes.push({\n      feed: \"libraries\",\n      message: err instanceof Error ? err.message : String(err),\n    });\n    return { entries: [], notes };\n  }\n}\n\n/**\n * Pull a (best-effort) snapshot of the connected remote store catalog.\n *\n * - Returns no entries when the resolved catalog is local-only or the host\n *   is unreachable (the failure becomes a note, not an exception).\n * - Maps `CatalogAsset` → `CatalogEntry`, carrying `publisher`, `repo`, and\n *   `category` straight through and using `source = \"store://<id>\"`; per-file\n *   `source` paths are not available for remote assets so the canonical ref is\n *   a stable placeholder.\n */\nasync function storeAssets(projectDir: string): Promise<{\n  entries: CatalogEntry[];\n  notes: FeedNote[];\n}> {\n  const notes: FeedNote[] = [];\n  try {\n    const { resolveCatalogSource } = await import(\"./open-library.ts\");\n    const { source, close } = await resolveCatalogSource({ projectDir });\n    try {\n      // The store lists only what `skaile add` can install (see store-addable.ts).\n      const assets = (await source.listAssets()).filter(\n        (a) => storeNotInstallableReason(a) === undefined,\n      );\n      const entries: CatalogEntry[] = assets.map((a) => ({\n        name: a.name,\n        kind: (a.kind as AssetKind) ?? \"skill\",\n        description: a.description ?? \"\",\n        source: `store://${a.id}`,\n        publisher: a.publisher,\n        repo: a.repo,\n        plugin: a.plugin,\n        category: a.category,\n        version: a.version,\n        requires: [],\n        dependencies: [],\n      }));\n      return { entries, notes };\n    } finally {\n      close();\n    }\n  } catch (err) {\n    const msg = err instanceof Error ? err.message : String(err);\n    // Local-only catalog throws a recognizable message — silence it; absence\n    // is the user's choice, not an error.\n    if (!/local/i.test(msg)) {\n      notes.push({ feed: \"store\", message: msg });\n    }\n    return { entries: [], notes };\n  }\n}\n\n/** The slice of `AssetManager` the source feed needs (kept narrow for tests). */\ninterface AssetManagerLike {\n  search: () => Promise<CatalogEntry[]>;\n  searchRepoRoots: () => { repoName: string; root: string }[];\n}\n\n/**\n * Project-source feed: leans on `AssetManager.search()`, which merges\n * `skaile.yaml`'s `sources:` field into the repositories map. Plugin grouping\n * (`entry.plugin`) is stamped by the scanner, so entries pass through as-is.\n */\nasync function sourceAssets(am: AssetManagerLike): Promise<OriginEntry[]> {\n  // The bundled factory tree is injected into the repositories map as an implicit\n  // source, so `am.search()` returns it too. It has its own `factory` origin band,\n  // so drop it here — otherwise the same first-party skills list twice under Sources.\n  const factoryPrefixes = factoryAssetRoots().map((r) => (r.endsWith(path.sep) ? r : r + path.sep));\n  const isFactoryPath = (p: string) =>\n    factoryPrefixes.some((fp) => p === fp.slice(0, -1) || p.startsWith(fp));\n\n  const all = (await am.search()).filter((e) => !isFactoryPath(e.source));\n  const entries: OriginEntry[] = [];\n  // Group each source's entries under the source node (its short repo name), not\n  // the publisher: under Sources the navigational question is \"which repo did\n  // this come from\". Each entry's `source` (absolute manifest path) lives under\n  // exactly one declared root, so group by prefix. The cache slug is\n  // URL-keyed `github.com/<org>/<repo>` — take the trailing segment.\n  for (const { repoName, root } of am.searchRepoRoots()) {\n    if (isFactoryPath(root)) continue;\n    const prefix = root.endsWith(path.sep) ? root : root + path.sep;\n    const owned = all.filter((e) => e.source === root || e.source.startsWith(prefix));\n    if (owned.length === 0) continue;\n    const sourceName = repoName.split(\"/\").pop() || repoName;\n    for (const entry of owned) entries.push({ origin: \"source\", entry, group: sourceName });\n  }\n  return entries;\n}\n\n/**\n * Factory-asset feed: scan the bundled first-party `factory-assets` tree(s)\n * resolved by `factoryAssetRoots()` (the `SKAILE_FACTORY_ASSETS_DIR` override\n * layer ahead of the bundled tree). 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A library whose scan fails becomes one\n * `FeedNote`; the outer `catch` covers only opening the index.\n */\nasync function libraryAssets(): Promise<{\n  entries: OriginEntry[];\n  notes: FeedNote[];\n}> {\n  const notes: FeedNote[] = [];\n  try {\n    // Lazy: the library subpath pulls in SQLite, which the other feeds never need.\n    const { openLibraryManager } = await import(\"./open-library.ts\");\n    const { getKindRegistry } = await import(\"./open-registry.ts\");\n    const { scanAuthoringLibraries } = await import(\"@skaile/workspaces/library\");\n    const { library: index, close } = await openLibraryManager();\n    try {\n      const entries: OriginEntry[] = [];\n      for (const scan of await scanAuthoringLibraries(index, getKindRegistry())) {\n        if (scan.error !== undefined) {\n          notes.push({ feed: \"libraries\", message: `${scan.library.name}: ${scan.error}` });\n          continue;\n        }\n        for (const asset of scan.assets) {\n          entries.push({\n            origin: \"library\",\n            entry: libraryEntryOf(asset),\n            group: scan.library.name,\n          });\n        }\n      }\n      return { entries, notes };\n    } finally {\n      close();\n    }\n  } catch (err) {\n    notes.push({\n      feed: \"libraries\",\n      message: err instanceof Error ? err.message : String(err),\n    });\n    return { entries: [], notes };\n  }\n}\n\n/**\n * Pull a (best-effort) snapshot of the connected remote store catalog.\n *\n * - Returns no entries when the resolved catalog is local-only or the host\n *   is unreachable (the failure becomes a note, not an exception).\n * - Maps `CatalogAsset` → `CatalogEntry`, carrying `publisher`, `repo`, and\n *   `category` straight through and using `source = \"store://<id>\"`; per-file\n *   `source` paths are not available for remote assets so the canonical ref is\n *   a stable placeholder.\n */\nasync function storeAssets(projectDir: string): Promise<{\n  entries: CatalogEntry[];\n  notes: FeedNote[];\n}> {\n  const notes: FeedNote[] = [];\n  try {\n    const { resolveCatalogSource } = await import(\"./open-library.ts\");\n    const { source, close } = await resolveCatalogSource({ projectDir });\n    try {\n      // The store lists only what `skaile add` can install (see store-addable.ts).\n      const assets = (await source.listAssets()).filter(\n        (a) => storeNotInstallableReason(a) === undefined,\n      );\n      const entries: CatalogEntry[] = assets.map((a) => ({\n        name: a.name,\n        kind: (a.kind as AssetKind) ?? \"skill\",\n        description: a.description ?? \"\",\n        source: `store://${a.id}`,\n        publisher: a.publisher,\n        repo: a.repo,\n        plugin: a.plugin,\n        category: a.category,\n        version: a.version,\n        requires: [],\n        dependencies: [],\n      }));\n      return { entries, notes };\n    } finally {\n      close();\n    }\n  } catch (err) {\n    const msg = err instanceof Error ? err.message : String(err);\n    // Local-only catalog throws a recognizable message — silence it; absence\n    // is the user's choice, not an error.\n    if (!/local/i.test(msg)) {\n      notes.push({ feed: \"store\", message: msg });\n    }\n    return { entries: [], notes };\n  }\n}\n\n/** The slice of `AssetManager` the source feed needs (kept narrow for tests). */\ninterface AssetManagerLike {\n  search: () => Promise<CatalogEntry[]>;\n  searchRepoRoots: () => { repoName: string; root: string }[];\n}\n\n/**\n * Project-source feed: leans on `AssetManager.search()`, which merges\n * `skaile.yaml`'s `sources:` field into the repositories map. Plugin grouping\n * (`entry.plugin`) is stamped by the scanner, so entries pass through as-is.\n */\nasync function sourceAssets(am: AssetManagerLike): Promise<OriginEntry[]> {\n  // The bundled factory tree is injected into the repositories map as an implicit\n  // source, so `am.search()` returns it too. It has its own `factory` origin band,\n  // so drop it here — otherwise the same first-party skills list twice under Sources.\n  const factoryPrefixes = factoryAssetRoots().map((r) => (r.endsWith(path.sep) ? r : r + path.sep));\n  const isFactoryPath = (p: string) =>\n    factoryPrefixes.some((fp) => p === fp.slice(0, -1) || p.startsWith(fp));\n\n  const all = (await am.search()).filter((e) => !isFactoryPath(e.source));\n  const entries: OriginEntry[] = [];\n  // Group each source's entries under the source node (its short repo name), not\n  // the publisher: under Sources the navigational question is \"which repo did\n  // this come from\". Each entry's `source` (absolute manifest path) lives under\n  // exactly one declared root, so group by prefix. The cache slug is\n  // URL-keyed `github.com/<org>/<repo>` — take the trailing segment.\n  for (const { repoName, root } of am.searchRepoRoots()) {\n    if (isFactoryPath(root)) continue;\n    const prefix = root.endsWith(path.sep) ? root : root + path.sep;\n    const owned = all.filter((e) => e.source === root || e.source.startsWith(prefix));\n    if (owned.length === 0) continue;\n    const sourceName = repoName.split(\"/\").pop() || repoName;\n    for (const entry of owned) entries.push({ origin: \"source\", entry, group: sourceName });\n  }\n  return entries;\n}\n\n/**\n * Factory-asset feed: scan the bundled first-party `factory-assets` tree(s)\n * resolved by `factoryAssetRoots()` (the `SKAILE_FACTORY_ASSETS_DIR` override\n * layer ahead of the bundled tree). Local disk only, no network — the entries are\n * the built-in skills / connectors / bundles that ship with `@skaile/workspaces`.\n * `factoryAssetRoots()` already dedupes, so the env override pointing at the\n * bundled dir collapses to one root.\n */\nasync function factoryAssets(): Promise<{\n  entries: CatalogEntry[];\n  notes: FeedNote[];\n}> {\n  const notes: FeedNote[] = [];\n  try {\n    const entries: CatalogEntry[] = [];\n    for (const root of factoryAssetRoots()) {\n      entries.push(...(await scanRepo(root, \"skaile-factory\", { knownKinds: getKnownKinds() })));\n    }\n    return { entries, notes };\n  } catch (err) {\n    notes.push({\n      feed: \"factory\",\n      message: err instanceof Error ? err.message : String(err),\n    });\n    return { entries: [], notes };\n  }\n}\n\n/** Tag a flat entry list with a single origin. */\nfunction tag(origin: AssetOrigin, entries: CatalogEntry[]): OriginEntry[] {\n  return entries.map((entry) => ({ origin, entry }));\n}\n\n/**\n * Run all feeds and return a single normalized result.\n *\n * Feeds run in parallel where possible — the store fetch is the slow one\n * (one HTTP call) and is fired alongside the local library walk. 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package/dist/asset-manager/catalog-deployer.js

@@ -1,17 +1,17 @@
-export { WORKSPACE_MOUNT_ENV_VAR, deployAll, deployCatalogEntry, findAiAssetsRoot, isUnderWorkspaceMount, resolveFlowSkills, undeployCatalogEntry, workspaceMountDirs } from '../chunk-LEOXPIC6.js';
-import '../chunk-4QINFQ27.js';
+export { WORKSPACE_MOUNT_ENV_VAR, deployAll, deployCatalogEntry, findAiAssetsRoot, isUnderWorkspaceMount, resolveFlowSkills, undeployCatalogEntry, workspaceMountDirs } from '../chunk-AP24HESN.js';
+import '../chunk-PIC23DDE.js';
 import '../chunk-4GY63JU6.js';
-import '../chunk-X7DIT65W.js';
+import '../chunk-5RDZ5JHH.js';
 import '../chunk-D54T2F54.js';
 import '../chunk-5BEFNLOR.js';
 import '../chunk-A2ULN3KX.js';
-import '../chunk-J76LDUDS.js';
+import '../chunk-ZVZTCDUN.js';
 import '../chunk-L5VSIPQD.js';
 import '../chunk-IG5LZ3WU.js';
-import '../chunk-ANSZULXH.js';
+import '../chunk-H7R7R5BN.js';
 import '../chunk-RVRB27AN.js';
-import '../chunk-SP5NGNBV.js';
-import '../chunk-VY6NTFE7.js';
+import '../chunk-YW2BNDSE.js';
+import '../chunk-FT4ZHLYR.js';
 import '../chunk-ICSCSM5D.js';
 import '../chunk-DKXNKFKP.js';
 import '../chunk-MJHSLODD.js';

package/dist/asset-manager/index.js

@@ -1,28 +1,28 @@
-export { AssetManager, FACTORY_SOURCE_URL, MissingManifestError, installAgentInstances, normalizeRepoUrl, parseCanonicalLockKey, parseRefTolerant, renderMcpServerConfig, softDepName } from '../chunk-R37L4BNR.js';
-import '../chunk-OOQ5Q75W.js';
-import '../chunk-NKDSU4Q7.js';
-import '../chunk-KRRHADE7.js';
+export { AssetManager, FACTORY_SOURCE_URL, MissingManifestError, installAgentInstances, normalizeRepoUrl, parseCanonicalLockKey, parseRefTolerant, renderMcpServerConfig, softDepName } from '../chunk-DADAZLFW.js';
+import '../chunk-D3PU3C6F.js';
+import '../chunk-ES6ARJPQ.js';
+import '../chunk-SXWGLW23.js';
 import '../chunk-BFMYYNDT.js';
 import '../chunk-3TXEJN4W.js';
-export { SCAFFOLD_KINDS, createScaffold, deployAll, installAgent, installTargetOf, removeAsset } from '../chunk-WWUWMOX2.js';
+export { SCAFFOLD_KINDS, createScaffold, deployAll, installAgent, installTargetOf, removeAsset } from '../chunk-FSLVMZXR.js';
 export { BUILT_IN_FRAGMENTS, loadPromptExtensions, resolveFragments } from '../chunk-NOA6EJXE.js';
 export { appendHistory, clearHistory, getRecentHistory, loadHistory } from '../chunk-KTBKW2FI.js';
 import '../chunk-UQ6LFBPZ.js';
-export { AGENT_RENDERERS, claudeCodeRenderer, codexRenderer, driverTargetSupportsAgents, ompRenderer, renderAgentToFramework } from '../chunk-BV7NLPI6.js';
-import '../chunk-MGM5EJQQ.js';
-import '../chunk-4QINFQ27.js';
+export { AGENT_RENDERERS, claudeCodeRenderer, codexRenderer, driverTargetSupportsAgents, ompRenderer, renderAgentToFramework } from '../chunk-6GSE63K2.js';
+import '../chunk-YK3XLEQJ.js';
+import '../chunk-PIC23DDE.js';
 import '../chunk-4GY63JU6.js';
-import '../chunk-X7DIT65W.js';
+import '../chunk-5RDZ5JHH.js';
 import '../chunk-D54T2F54.js';
 import '../chunk-5BEFNLOR.js';
 import '../chunk-A2ULN3KX.js';
-import '../chunk-J76LDUDS.js';
+import '../chunk-ZVZTCDUN.js';
 import '../chunk-L5VSIPQD.js';
 import '../chunk-IG5LZ3WU.js';
-import '../chunk-ANSZULXH.js';
+import '../chunk-H7R7R5BN.js';
 import '../chunk-RVRB27AN.js';
-import '../chunk-SP5NGNBV.js';
-import '../chunk-VY6NTFE7.js';
+import '../chunk-YW2BNDSE.js';
+import '../chunk-FT4ZHLYR.js';
 import '../chunk-ICSCSM5D.js';
 import '../chunk-DKXNKFKP.js';
 import '../chunk-MJHSLODD.js';

package/dist/asset-manager/installer.js

@@ -1,20 +1,20 @@
-export { SCAFFOLD_KINDS, canonicalEntryRef, createScaffold, deployAll, deployAsset, deployedAssetDrift, diffDeployedAgent, installTargetOf, removeAsset } from '../chunk-WWUWMOX2.js';
+export { SCAFFOLD_KINDS, canonicalEntryRef, createScaffold, deployAll, deployAsset, deployedAssetDrift, diffDeployedAgent, installTargetOf, readKeptLegacyCopies, removeAsset, writeKeptLegacyCopies } from '../chunk-FSLVMZXR.js';
 import '../chunk-NOA6EJXE.js';
-import '../chunk-BV7NLPI6.js';
-import '../chunk-MGM5EJQQ.js';
-import '../chunk-4QINFQ27.js';
+import '../chunk-6GSE63K2.js';
+import '../chunk-YK3XLEQJ.js';
+import '../chunk-PIC23DDE.js';
 import '../chunk-4GY63JU6.js';
-import '../chunk-X7DIT65W.js';
+import '../chunk-5RDZ5JHH.js';
 import '../chunk-D54T2F54.js';
 import '../chunk-5BEFNLOR.js';
 import '../chunk-A2ULN3KX.js';
-import '../chunk-J76LDUDS.js';
+import '../chunk-ZVZTCDUN.js';
 import '../chunk-L5VSIPQD.js';
 import '../chunk-IG5LZ3WU.js';
-import '../chunk-ANSZULXH.js';
+import '../chunk-H7R7R5BN.js';
 import '../chunk-RVRB27AN.js';
-import '../chunk-SP5NGNBV.js';
-import '../chunk-VY6NTFE7.js';
+import '../chunk-YW2BNDSE.js';
+import '../chunk-FT4ZHLYR.js';
 import '../chunk-ICSCSM5D.js';
 import '../chunk-DKXNKFKP.js';
 import '../chunk-MJHSLODD.js';

package/dist/asset-manager/renderers.js

@@ -1,18 +1,18 @@
-export { AGENT_RENDERERS, CODEX_IDENTITY_DIR, claudeCodeRenderer, codexRenderer, driverTargetSupportsAgents, ompRenderer, renderAgentToFramework } from '../chunk-BV7NLPI6.js';
-import '../chunk-MGM5EJQQ.js';
-import '../chunk-4QINFQ27.js';
+export { AGENT_RENDERERS, CODEX_IDENTITY_DIR, claudeCodeRenderer, codexRenderer, driverTargetSupportsAgents, ompRenderer, renderAgentToFramework } from '../chunk-6GSE63K2.js';
+import '../chunk-YK3XLEQJ.js';
+import '../chunk-PIC23DDE.js';
 import '../chunk-4GY63JU6.js';
-import '../chunk-X7DIT65W.js';
+import '../chunk-5RDZ5JHH.js';
 import '../chunk-D54T2F54.js';
 import '../chunk-5BEFNLOR.js';
 import '../chunk-A2ULN3KX.js';
-import '../chunk-J76LDUDS.js';
+import '../chunk-ZVZTCDUN.js';
 import '../chunk-L5VSIPQD.js';
 import '../chunk-IG5LZ3WU.js';
-import '../chunk-ANSZULXH.js';
+import '../chunk-H7R7R5BN.js';
 import '../chunk-RVRB27AN.js';
-import '../chunk-SP5NGNBV.js';
-import '../chunk-VY6NTFE7.js';
+import '../chunk-YW2BNDSE.js';
+import '../chunk-FT4ZHLYR.js';
 import '../chunk-ICSCSM5D.js';
 import '../chunk-DKXNKFKP.js';
 import '../chunk-MJHSLODD.js';

package/dist/asset-manager/src/index.d.ts

@@ -252,6 +252,11 @@ export interface StoreNotChecked {
 export interface InstallResult {
     /** Canonical refs (`kind:@publisher/name#version`) successfully deployed in this run. */
     deployed: string[];
+    /**
+     * Deployed library assets whose body is still the untouched `library create` scaffold: they
+     * fail `validate` and the publish plan, so `install` names them (p926). Absent when none is.
+     */
+    placeholderBodies?: string[];
     /** Asset refs (`kind:name`) removed because they are no longer in the resolved set. */
     removed: string[];
     /**
@@ -385,6 +390,12 @@ export interface OutdatedEntry {
      * not the one the lock names (`library`), e.g. after `skaile library default <other>`.
      */
     movesTo?: string;
+    /**
+     * Source asset only: the version the next `install` or `update` locks it under, when that
+     * is not the locked key. A `0.0.0-sha.<commit>` key whose file now declares a version is
+     * re-keyed (`0.0.0-sha.7de3555 → 0.2.0`, p914).
+     */
+    rekeyTo?: string;
     /**
      * Set on a `problem` row whose cause `skaile install` cannot fix: the asset's library is
      * gone or its publisher changed, so the ref resolves nowhere. `problem` names what to
@@ -447,6 +458,15 @@ export interface RemoveResult {
      * kept, not deleted. Empty when `force` was given.
      */
     kept?: string[];
+    /**
+     * Deployed folders or files of the asset that another publisher's lock entry holds: kept, not
+     * deleted (only that entry's own `remove` may delete them, or `force`). `refs` are the owning
+     * lock entries, `paths` the kept folders.
+     */
+    ownedBy?: {
+        refs: string[];
+        paths: string[];
+    }[];
 }
 /**
  * A missing dependency detected by `AssetManager.doctor()`.
@@ -657,6 +677,8 @@ export declare class AssetManager {
     private _knownKinds?;
     /** Explicit global-harness override (global mode only); else auto-resolved. */
     private readonly harnessesOverride?;
+    private readonly legacyCopiesRemoved;
+    private readonly legacyCopiesKept;
     /** Injected catalog fetcher (tests / custom); falls back to a built one. */
     private readonly injectedStoreFetcher?;
     /** Injected byte fetcher for store staging; falls back to GitHub. */
@@ -701,6 +723,42 @@ export declare class AssetManager {
      * single-target path.
      */
     private targetHarnesses;
+    /** The global harness set without a `--harness` filter (see {@link AssetManager.targetHarnesses}). */
+    private defaultGlobalHarnesses;
+    /**
+     * `global_asset_harnesses:` of `~/.skaile/skaile.yaml`: the harnesses `add --global --harness`
+     * limited an entry to, keyed by the declared ref without its pin. An entry with no row goes to
+     * every global harness. Global mode only.
+     */
+    private readEntryHarnesses;
+    /** The harnesses recorded for `kind:name` (`publisher` must agree when both sides have one). */
+    private entryHarnessRecord;
+    /** Keep the entries a recorded `--harness` limit sends to `target` (all of them in project mode). */
+    private entriesForHarness;
+    /**
+     * Set (or, with `harnesses` undefined, clear) the harness row of `ref` in the parsed
+     * `~/.skaile/skaile.yaml` `raw`. Returns whether `raw` changed.
+     */
+    private setEntryHarnessRow;
+    /**
+     * Delete the copies a 5.12.0 global install left in `~/.omp/skills`, `~/.omp/agents`,
+     * `~/.omp/prompts` and `~/.omp/contracts` (omp reads `~/.omp/agent/<dir>`) for the assets just
+     * deployed into omp's new folder, and remember them for {@link takeLegacyCopiesRemoved} (p744).
+     */
+    private sweepLegacyOmpCopies;
+    /** The old omp copies the deploys since the last call kept, as skaile did not write them. */
+    takeLegacyCopiesKept(): string[];
+    /**
+     * The old `~/.omp/<dir>/<name>` copies of the globally locked assets that are still on disk
+     * (a 5.12.0 install wrote them; omp reads `~/.omp/agent/<dir>`). Global mode only. `check`,
+     * `doctor` and `clean` with `--global` report or remove them (p911).
+     */
+    staleLegacyOmpCopies(): {
+        ref: string;
+        path: string;
+    }[];
+    /** The old omp copies the deploys since the last call removed (see {@link sweepLegacyOmpCopies}). */
+    takeLegacyCopiesRemoved(): string[];
     /**
      * The harnesses `add` / `install` deploy into: `[driverTarget]` for a project, the global
      * harness set (see {@link AssetManager.targetHarnesses}) for a global manager.
@@ -829,6 +887,12 @@ export declare class AssetManager {
      * has nothing to choose between and is left out.
      */
     competingOrigins(): Promise<Map<string, RefOrigin[]>>;
+    /**
+     * The origins of {@link refOrigins} for every ref, keyed by `kind:@publisher/name`: the
+     * version in each row is the one `add` locks (a source asset whose file declares none is
+     * `0.0.0-sha.<commit>`), which `search` lists too (p855).
+     */
+    allOrigins(): Promise<Map<string, RefOrigin[]>>;
     /**
      * The origins of {@link refOrigins} for every ref, or for the one `only` names
      * (`kind:@publisher/name`), keyed by `kind:@publisher/name`.
@@ -951,7 +1015,8 @@ export declare class AssetManager {
      * A git-backed library also records its remote URL. When the previous lock names the
      * library under another name that {@link lockedLibrary} matched to this one by URL (a
      * teammate registered the same remote under a different name), the entry keeps the locked
-     * name and URL: the lock does not change because it was installed on another machine.
+     * name and URL: the lock does not change because it was installed on another machine. A
+     * library renamed on this machine with `library rename` is locked under its new name.
      */
     private libraryLockEntries;
     /**
@@ -1126,7 +1191,8 @@ export declare class AssetManager {
      *
      * @param opts - Optional installation options.
      * @param opts.locked - When `true`, restore the exact versions recorded in the existing
-     *   lock file instead of resolving from source. Throws if no lock file is found.
+     *   lock file instead of resolving from source. Throws if no lock file is found, unless the
+     *   project declares no dependencies (nothing to restore).
      * @param opts.link - When `true`, symlink local-path assets instead of copying them
      *   (the author dev-loop). Machine-local / not for committing; a no-op for
      *   store/factory sources. Defaults to copy.
@@ -1275,6 +1341,8 @@ export declare class AssetManager {
     add(ref: string, opts?: {
         link?: boolean;
         onLibraryOrigin?: (deployedRef: string, library: string) => void;
+        /** Called per deployed library asset whose body is still the untouched `library create` scaffold. */
+        onPlaceholderBody?: (deployedRef: string) => void;
         /** Called per already-locked asset this add moved to another library than its lock entry named. */
         onLibraryMoved?: (move: LibraryMove) => void;
         /** `update <name>`: an equal-version tie between libraries goes to the default library, then the locked one (see {@link install}'s `moveLibraries`). */
@@ -1407,8 +1475,9 @@ export declare class AssetManager {
      *
      * Deliberately does NOT re-render the driver target's MCP config: the render
      * step is async (the declaration resolver is), and making this synchronous
-     * method async would break every external caller. A removed MCP server's
-     * generated entry is dropped by the next {@link AssetManager.install} — see
+     * method async would break every external caller. {@link removeWithDependencies}
+     * (what `skaile remove` runs) does re-render it; a caller of this method gets the
+     * dropped entry at the next {@link AssetManager.install} — see
      * {@link renderMcpServerConfig}.
      *
      * @param ref - Asset ref: `kind:@publisher/name`, or the short `kind:name` /
@@ -1465,8 +1534,11 @@ export declare class AssetManager {
      * publisher-less declaration.
      */
     private trackedPublishers;
-    /** Whether a lock entry holds `kind:name` (any publisher): the deployed folder is then the project's copy of it. */
-    private lockHolds;
+    /**
+     * The lock entries that hold `kind:name`, each with its publisher (no leading `@`) and its
+     * canonical ref. A deployed folder carries no publisher; these are who it belongs to.
+     */
+    private lockHolders;
     /** The folders or files of `kind:name` on disk in `target`, shown relative to the project. */
     private heldDeployPaths;
     /**
@@ -1476,6 +1548,13 @@ export declare class AssetManager {
      * it is kept and named in `opts.kept` unless `opts.force`.
      */
     private removeResolved;
+    /**
+     * After `remove --global --harness X`: the harnesses outside `X` that still hold a copy of the
+     * asset, or `undefined` when none does (or this is not a harness-limited global remove).
+     */
+    private harnessesStillHolding;
+    /** Limit the declared global entry of `target` to `harnesses` (`~/.skaile/skaile.yaml`). */
+    private limitDeclaredEntry;
     /**
      * Drop the locked assets among `requiredRefs` (and what they require in turn) that
      * nothing needs any more: not declared in `skaile.yaml`, not required by a locked
@@ -1687,6 +1766,13 @@ export declare class AssetManager {
      * @returns Array of {@link OutdatedEntry} objects.
      */
     outdated(): Promise<OutdatedEntry[]>;
+    /**
+     * List a source asset locked under a `0.0.0-sha.<commit>` key whose file now declares a
+     * version: the next `install` or `update` re-keys it (`replaced 0.0.0-sha.7de3555 → 0.2.0`),
+     * so `outdated` lists it as `re-key (…)` instead of saying everything is up to date (p914).
+     * An asset already listed (behind its remote) gets the target on that row.
+     */
+    private addRekeyRows;
     /**
      * List a locked library asset that `update` would move to another library (a default-library
      * switch, a library that now holds a newer version) as `library → movesTo`, so `outdated`
@@ -1736,6 +1822,11 @@ export declare class AssetManager {
      * @throws When `diff(1)` itself fails (exit status other than 0/1).
      */
     diff(ref: string): Promise<DiffResult>;
+    /**
+     * The agent instances of `skaile.yaml` whose `ref` names `want` (an `agent:` ref, matched on
+     * name and, when both name one, publisher) and bind to an agent definition directory.
+     */
+    private instancesBoundTo;
     /**
      * Resolve all declared dependencies and write (or overwrite) `skaile.lock.yaml`.
      *
@@ -2029,6 +2120,12 @@ export declare class AssetManager {
         }>;
         unmanaged: string[];
     };
+    /**
+     * `clean --global`: remove the copy of every asset the global lock tracks from each global
+     * harness (and the old `~/.omp/<dir>` copy), keeping `~/.skaile/skaile.yaml`. With `all`, the
+     * global lock goes too.
+     */
+    private cleanGlobal;
     /**
      * Remove the deployed dir of every asset tracked by the lock; missing dirs
      * still count as removed. Returns the list of cleaned refs.
@@ -2062,6 +2159,8 @@ export declare class AssetManager {
      * @returns `true` when a declaration was removed.
      */
     private removeDependencyFromConfig;
+    /** The refs `skaile.yaml` binds agent instances to: every `agents.<id>.ref` and `agent.definition`. Project mode only. */
+    private declaredAgentInstanceRefs;
     /**
      * Drop the agent instances of `skaile.yaml` (`agents.<id>`, or the `agent.definition`
      * default) whose `ref` binds to `target`, and the native agent files an install rendered for