@n8n-dev/n8n-nodes-monarchinitiative 1.0.0
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/README.md +122 -0
- package/dist/banner.svg +124 -0
- package/dist/credentials/MonarchinitiativeApi.credentials.d.ts +9 -0
- package/dist/credentials/MonarchinitiativeApi.credentials.js +49 -0
- package/dist/credentials/MonarchinitiativeApi.credentials.js.map +1 -0
- package/dist/icons/monarchinitiative.dark.svg +18 -0
- package/dist/icons/monarchinitiative.svg +18 -0
- package/dist/nodes/Monarchinitiative/Monarchinitiative.node.d.ts +4 -0
- package/dist/nodes/Monarchinitiative/Monarchinitiative.node.js +229 -0
- package/dist/nodes/Monarchinitiative/Monarchinitiative.node.js.map +1 -0
- package/dist/nodes/Monarchinitiative/Monarchinitiative.node.json +20 -0
- package/dist/nodes/Monarchinitiative/monarchinitiative.dark.svg +18 -0
- package/dist/nodes/Monarchinitiative/monarchinitiative.svg +18 -0
- package/dist/nodes/Monarchinitiative/resources/association/index.d.ts +2 -0
- package/dist/nodes/Monarchinitiative/resources/association/index.js +1439 -0
- package/dist/nodes/Monarchinitiative/resources/association/index.js.map +1 -0
- package/dist/nodes/Monarchinitiative/resources/bioentity/index.d.ts +2 -0
- package/dist/nodes/Monarchinitiative/resources/bioentity/index.js +30727 -0
- package/dist/nodes/Monarchinitiative/resources/bioentity/index.js.map +1 -0
- package/dist/nodes/Monarchinitiative/resources/bioentityset/index.d.ts +2 -0
- package/dist/nodes/Monarchinitiative/resources/bioentityset/index.js +621 -0
- package/dist/nodes/Monarchinitiative/resources/bioentityset/index.js.map +1 -0
- package/dist/nodes/Monarchinitiative/resources/bioentityset-homologs/index.d.ts +2 -0
- package/dist/nodes/Monarchinitiative/resources/bioentityset-homologs/index.js +78 -0
- package/dist/nodes/Monarchinitiative/resources/bioentityset-homologs/index.js.map +1 -0
- package/dist/nodes/Monarchinitiative/resources/bioentityset-slimmer/index.d.ts +2 -0
- package/dist/nodes/Monarchinitiative/resources/bioentityset-slimmer/index.js +531 -0
- package/dist/nodes/Monarchinitiative/resources/bioentityset-slimmer/index.js.map +1 -0
- package/dist/nodes/Monarchinitiative/resources/cam/index.d.ts +2 -0
- package/dist/nodes/Monarchinitiative/resources/cam/index.js +632 -0
- package/dist/nodes/Monarchinitiative/resources/cam/index.js.map +1 -0
- package/dist/nodes/Monarchinitiative/resources/evidence-graph/index.d.ts +2 -0
- package/dist/nodes/Monarchinitiative/resources/evidence-graph/index.js +109 -0
- package/dist/nodes/Monarchinitiative/resources/evidence-graph/index.js.map +1 -0
- package/dist/nodes/Monarchinitiative/resources/genome-features/index.d.ts +2 -0
- package/dist/nodes/Monarchinitiative/resources/genome-features/index.js +53 -0
- package/dist/nodes/Monarchinitiative/resources/genome-features/index.js.map +1 -0
- package/dist/nodes/Monarchinitiative/resources/graph/index.d.ts +2 -0
- package/dist/nodes/Monarchinitiative/resources/graph/index.js +233 -0
- package/dist/nodes/Monarchinitiative/resources/graph/index.js.map +1 -0
- package/dist/nodes/Monarchinitiative/resources/identifier-mapper/index.d.ts +2 -0
- package/dist/nodes/Monarchinitiative/resources/identifier-mapper/index.js +53 -0
- package/dist/nodes/Monarchinitiative/resources/identifier-mapper/index.js.map +1 -0
- package/dist/nodes/Monarchinitiative/resources/identifier-prefixes/index.d.ts +2 -0
- package/dist/nodes/Monarchinitiative/resources/identifier-prefixes/index.js +115 -0
- package/dist/nodes/Monarchinitiative/resources/identifier-prefixes/index.js.map +1 -0
- package/dist/nodes/Monarchinitiative/resources/index.d.ts +26 -0
- package/dist/nodes/Monarchinitiative/resources/index.js +56 -0
- package/dist/nodes/Monarchinitiative/resources/index.js.map +1 -0
- package/dist/nodes/Monarchinitiative/resources/individual/index.d.ts +2 -0
- package/dist/nodes/Monarchinitiative/resources/individual/index.js +84 -0
- package/dist/nodes/Monarchinitiative/resources/individual/index.js.map +1 -0
- package/dist/nodes/Monarchinitiative/resources/mart/index.d.ts +2 -0
- package/dist/nodes/Monarchinitiative/resources/mart/index.js +252 -0
- package/dist/nodes/Monarchinitiative/resources/mart/index.js.map +1 -0
- package/dist/nodes/Monarchinitiative/resources/metadata/index.d.ts +2 -0
- package/dist/nodes/Monarchinitiative/resources/metadata/index.js +53 -0
- package/dist/nodes/Monarchinitiative/resources/metadata/index.js.map +1 -0
- package/dist/nodes/Monarchinitiative/resources/mme/index.d.ts +2 -0
- package/dist/nodes/Monarchinitiative/resources/mme/index.js +177 -0
- package/dist/nodes/Monarchinitiative/resources/mme/index.js.map +1 -0
- package/dist/nodes/Monarchinitiative/resources/nlp-annotate/index.d.ts +2 -0
- package/dist/nodes/Monarchinitiative/resources/nlp-annotate/index.js +946 -0
- package/dist/nodes/Monarchinitiative/resources/nlp-annotate/index.js.map +1 -0
- package/dist/nodes/Monarchinitiative/resources/ontol/index.d.ts +2 -0
- package/dist/nodes/Monarchinitiative/resources/ontol/index.js +390 -0
- package/dist/nodes/Monarchinitiative/resources/ontol/index.js.map +1 -0
- package/dist/nodes/Monarchinitiative/resources/ontol-identifier/index.d.ts +2 -0
- package/dist/nodes/Monarchinitiative/resources/ontol-identifier/index.js +136 -0
- package/dist/nodes/Monarchinitiative/resources/ontol-identifier/index.js.map +1 -0
- package/dist/nodes/Monarchinitiative/resources/ontol-labeler/index.d.ts +2 -0
- package/dist/nodes/Monarchinitiative/resources/ontol-labeler/index.js +79 -0
- package/dist/nodes/Monarchinitiative/resources/ontol-labeler/index.js.map +1 -0
- package/dist/nodes/Monarchinitiative/resources/ontology/index.d.ts +2 -0
- package/dist/nodes/Monarchinitiative/resources/ontology/index.js +376 -0
- package/dist/nodes/Monarchinitiative/resources/ontology/index.js.map +1 -0
- package/dist/nodes/Monarchinitiative/resources/owl-ontology/index.d.ts +2 -0
- package/dist/nodes/Monarchinitiative/resources/owl-ontology/index.js +84 -0
- package/dist/nodes/Monarchinitiative/resources/owl-ontology/index.js.map +1 -0
- package/dist/nodes/Monarchinitiative/resources/pair-sim/index.d.ts +2 -0
- package/dist/nodes/Monarchinitiative/resources/pair-sim/index.js +78 -0
- package/dist/nodes/Monarchinitiative/resources/pair-sim/index.js.map +1 -0
- package/dist/nodes/Monarchinitiative/resources/relation-usage/index.d.ts +2 -0
- package/dist/nodes/Monarchinitiative/resources/relation-usage/index.js +346 -0
- package/dist/nodes/Monarchinitiative/resources/relation-usage/index.js.map +1 -0
- package/dist/nodes/Monarchinitiative/resources/search/index.d.ts +2 -0
- package/dist/nodes/Monarchinitiative/resources/search/index.js +940 -0
- package/dist/nodes/Monarchinitiative/resources/search/index.js.map +1 -0
- package/dist/nodes/Monarchinitiative/resources/sim/index.d.ts +2 -0
- package/dist/nodes/Monarchinitiative/resources/sim/index.js +596 -0
- package/dist/nodes/Monarchinitiative/resources/sim/index.js.map +1 -0
- package/dist/nodes/Monarchinitiative/resources/variation-set/index.d.ts +2 -0
- package/dist/nodes/Monarchinitiative/resources/variation-set/index.js +689 -0
- package/dist/nodes/Monarchinitiative/resources/variation-set/index.js.map +1 -0
- package/dist/package.json +62 -0
- package/dist/tsconfig.tsbuildinfo +1 -0
- package/package.json +62 -0
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"use strict";
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Object.defineProperty(exports, "__esModule", { value: true });
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exports.associationDescription = void 0;
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exports.associationDescription = [
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{
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"displayName": "Operation",
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"name": "operation",
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"type": "options",
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"noDataExpression": true,
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"displayOptions": {
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"show": {
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"resource": [
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"Association"
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]
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}
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},
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"options": [
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{
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"name": "Get Associations Between",
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"value": "Get Associations Between",
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"action": "Returns associations connecting two entities",
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"description": "Given two entities (e.g. a particular gene and a particular disease), if these two entities\nare connected (directly or indirectly), then return the association objects describing\nthe connection.",
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"routing": {
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"request": {
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"method": "GET",
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"url": "=/association/between/{{$parameter[\"subject\"]}}/{{$parameter[\"object\"]}}"
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}
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}
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},
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{
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"name": "Get Association By Subject Category Search",
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"value": "Get Association By Subject Category Search",
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"action": "Returns list of matching associations for a given subject category",
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"description": "Returns list of matching associations for a given subject category",
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"routing": {
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"request": {
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"method": "GET",
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"url": "=/association/find/{{$parameter[\"subject_category\"]}}"
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}
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}
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},
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{
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"name": "Get Association By Subject And Object Category Search",
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"value": "Get Association By Subject And Object Category Search",
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"action": "Returns list of matching associations between a given subject and object category",
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"description": "Returns list of matching associations between a given subject and object category",
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"routing": {
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"request": {
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"method": "GET",
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"url": "=/association/find/{{$parameter[\"subject_category\"]}}/{{$parameter[\"object_category\"]}}"
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}
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}
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},
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{
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"name": "Get Associations From",
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"value": "Get Associations From",
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"action": "Returns list of matching associations starting from a given subject (source)",
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"description": "Returns list of matching associations starting from a given subject (source)",
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"routing": {
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"request": {
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"method": "GET",
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"url": "=/association/from/{{$parameter[\"subject\"]}}"
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}
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}
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},
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{
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"name": "Get Associations To",
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"value": "Get Associations To",
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"action": "Returns list of matching associations pointing to a given object (target)",
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"description": "Returns list of matching associations pointing to a given object (target)",
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"routing": {
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"request": {
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"method": "GET",
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"url": "=/association/to/{{$parameter[\"object\"]}}"
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}
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}
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},
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{
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"name": "Get Association By Subject And Assoc Type",
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"value": "Get Association By Subject And Assoc Type",
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"action": "Returns list of matching associations of a given type",
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"description": "Returns list of matching associations of a given type",
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"routing": {
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"request": {
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"method": "GET",
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"url": "=/association/type/{{$parameter[\"association_type\"]}}"
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}
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}
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},
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{
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"name": "Get Association Object",
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"value": "Get Association Object",
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"action": "Returns the association with a given identifier",
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"description": "An association connects, at a minimum, two things, designated subject and object,\nvia some relationship. Associations also include evidence, provenance etc.",
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"routing": {
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"request": {
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"method": "GET",
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"url": "=/association/{{$parameter[\"id\"]}}"
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}
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}
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}
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],
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"default": ""
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},
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{
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"displayName": "GET /association/between/{subject}/{object}",
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"name": "operation",
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"type": "notice",
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"typeOptions": {
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"theme": "info"
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},
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"default": "",
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"displayOptions": {
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"show": {
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"resource": [
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"Association"
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],
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"operation": [
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"Get Associations Between"
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]
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}
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}
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},
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{
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"displayName": "Rows",
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"name": "rows",
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"description": "number of rows",
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"default": 100,
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"type": "number",
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"routing": {
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"send": {
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"type": "query",
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"property": "rows",
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"value": "={{ $value }}",
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"propertyInDotNotation": false
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}
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},
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"displayOptions": {
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"show": {
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"resource": [
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"Association"
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],
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"operation": [
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"Get Associations Between"
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]
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}
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}
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},
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{
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"displayName": "Start",
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"name": "start",
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"description": "beginning row",
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"default": 0,
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"type": "number",
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"routing": {
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"send": {
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"type": "query",
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"property": "start",
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"value": "={{ $value }}",
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"propertyInDotNotation": false
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}
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},
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"displayOptions": {
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"show": {
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"resource": [
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"Association"
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],
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"operation": [
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"Get Associations Between"
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]
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}
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}
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},
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{
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"displayName": "Evidence",
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"name": "evidence",
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"description": "Object id, e.g. ECO:0000501 (for IEA; Includes inferred by default) or a specific publication or other supporting object, e.g. ZFIN:ZDB-PUB-060503-2",
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"default": "",
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"type": "string",
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"routing": {
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"send": {
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"type": "query",
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"property": "evidence",
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"value": "={{ $value }}",
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"propertyInDotNotation": false
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}
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},
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"displayOptions": {
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"show": {
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"resource": [
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"Association"
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],
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"operation": [
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"Get Associations Between"
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]
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}
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}
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},
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{
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"displayName": "Unselect Evidence",
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"name": "unselect_evidence",
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"description": "If true, excludes evidence objects in response",
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"default": false,
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"type": "boolean",
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"routing": {
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"send": {
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"type": "query",
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"property": "unselect_evidence",
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"value": "={{ $value }}",
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"propertyInDotNotation": false
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}
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},
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"displayOptions": {
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"show": {
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"resource": [
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"Association"
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],
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"operation": [
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"Get Associations Between"
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]
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}
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}
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},
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{
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"displayName": "Exclude Automatic Assertions",
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"name": "exclude_automatic_assertions",
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"description": "If true, excludes associations that involve IEAs (ECO:0000501)",
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"default": false,
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"type": "boolean",
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"routing": {
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"send": {
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"type": "query",
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"property": "exclude_automatic_assertions",
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"value": "={{ $value }}",
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"propertyInDotNotation": false
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}
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237
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+
},
|
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238
|
+
"displayOptions": {
|
|
239
|
+
"show": {
|
|
240
|
+
"resource": [
|
|
241
|
+
"Association"
|
|
242
|
+
],
|
|
243
|
+
"operation": [
|
|
244
|
+
"Get Associations Between"
|
|
245
|
+
]
|
|
246
|
+
}
|
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247
|
+
}
|
|
248
|
+
},
|
|
249
|
+
{
|
|
250
|
+
"displayName": "Use Compact Associations",
|
|
251
|
+
"name": "use_compact_associations",
|
|
252
|
+
"description": "If true, returns results in compact associations format",
|
|
253
|
+
"default": false,
|
|
254
|
+
"type": "boolean",
|
|
255
|
+
"routing": {
|
|
256
|
+
"send": {
|
|
257
|
+
"type": "query",
|
|
258
|
+
"property": "use_compact_associations",
|
|
259
|
+
"value": "={{ $value }}",
|
|
260
|
+
"propertyInDotNotation": false
|
|
261
|
+
}
|
|
262
|
+
},
|
|
263
|
+
"displayOptions": {
|
|
264
|
+
"show": {
|
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265
|
+
"resource": [
|
|
266
|
+
"Association"
|
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267
|
+
],
|
|
268
|
+
"operation": [
|
|
269
|
+
"Get Associations Between"
|
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270
|
+
]
|
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271
|
+
}
|
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272
|
+
}
|
|
273
|
+
},
|
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274
|
+
{
|
|
275
|
+
"displayName": "GET /association/find/{subject_category}",
|
|
276
|
+
"name": "operation",
|
|
277
|
+
"type": "notice",
|
|
278
|
+
"typeOptions": {
|
|
279
|
+
"theme": "info"
|
|
280
|
+
},
|
|
281
|
+
"default": "",
|
|
282
|
+
"displayOptions": {
|
|
283
|
+
"show": {
|
|
284
|
+
"resource": [
|
|
285
|
+
"Association"
|
|
286
|
+
],
|
|
287
|
+
"operation": [
|
|
288
|
+
"Get Association By Subject Category Search"
|
|
289
|
+
]
|
|
290
|
+
}
|
|
291
|
+
}
|
|
292
|
+
},
|
|
293
|
+
{
|
|
294
|
+
"displayName": "Rows",
|
|
295
|
+
"name": "rows",
|
|
296
|
+
"description": "number of rows",
|
|
297
|
+
"default": 100,
|
|
298
|
+
"type": "number",
|
|
299
|
+
"routing": {
|
|
300
|
+
"send": {
|
|
301
|
+
"type": "query",
|
|
302
|
+
"property": "rows",
|
|
303
|
+
"value": "={{ $value }}",
|
|
304
|
+
"propertyInDotNotation": false
|
|
305
|
+
}
|
|
306
|
+
},
|
|
307
|
+
"displayOptions": {
|
|
308
|
+
"show": {
|
|
309
|
+
"resource": [
|
|
310
|
+
"Association"
|
|
311
|
+
],
|
|
312
|
+
"operation": [
|
|
313
|
+
"Get Association By Subject Category Search"
|
|
314
|
+
]
|
|
315
|
+
}
|
|
316
|
+
}
|
|
317
|
+
},
|
|
318
|
+
{
|
|
319
|
+
"displayName": "Start",
|
|
320
|
+
"name": "start",
|
|
321
|
+
"description": "beginning row",
|
|
322
|
+
"default": 0,
|
|
323
|
+
"type": "number",
|
|
324
|
+
"routing": {
|
|
325
|
+
"send": {
|
|
326
|
+
"type": "query",
|
|
327
|
+
"property": "start",
|
|
328
|
+
"value": "={{ $value }}",
|
|
329
|
+
"propertyInDotNotation": false
|
|
330
|
+
}
|
|
331
|
+
},
|
|
332
|
+
"displayOptions": {
|
|
333
|
+
"show": {
|
|
334
|
+
"resource": [
|
|
335
|
+
"Association"
|
|
336
|
+
],
|
|
337
|
+
"operation": [
|
|
338
|
+
"Get Association By Subject Category Search"
|
|
339
|
+
]
|
|
340
|
+
}
|
|
341
|
+
}
|
|
342
|
+
},
|
|
343
|
+
{
|
|
344
|
+
"displayName": "Evidence",
|
|
345
|
+
"name": "evidence",
|
|
346
|
+
"description": "Object id, e.g. ECO:0000501 (for IEA; Includes inferred by default) or a specific publication or other supporting object, e.g. ZFIN:ZDB-PUB-060503-2",
|
|
347
|
+
"default": "",
|
|
348
|
+
"type": "string",
|
|
349
|
+
"routing": {
|
|
350
|
+
"send": {
|
|
351
|
+
"type": "query",
|
|
352
|
+
"property": "evidence",
|
|
353
|
+
"value": "={{ $value }}",
|
|
354
|
+
"propertyInDotNotation": false
|
|
355
|
+
}
|
|
356
|
+
},
|
|
357
|
+
"displayOptions": {
|
|
358
|
+
"show": {
|
|
359
|
+
"resource": [
|
|
360
|
+
"Association"
|
|
361
|
+
],
|
|
362
|
+
"operation": [
|
|
363
|
+
"Get Association By Subject Category Search"
|
|
364
|
+
]
|
|
365
|
+
}
|
|
366
|
+
}
|
|
367
|
+
},
|
|
368
|
+
{
|
|
369
|
+
"displayName": "Unselect Evidence",
|
|
370
|
+
"name": "unselect_evidence",
|
|
371
|
+
"description": "If true, excludes evidence objects in response",
|
|
372
|
+
"default": false,
|
|
373
|
+
"type": "boolean",
|
|
374
|
+
"routing": {
|
|
375
|
+
"send": {
|
|
376
|
+
"type": "query",
|
|
377
|
+
"property": "unselect_evidence",
|
|
378
|
+
"value": "={{ $value }}",
|
|
379
|
+
"propertyInDotNotation": false
|
|
380
|
+
}
|
|
381
|
+
},
|
|
382
|
+
"displayOptions": {
|
|
383
|
+
"show": {
|
|
384
|
+
"resource": [
|
|
385
|
+
"Association"
|
|
386
|
+
],
|
|
387
|
+
"operation": [
|
|
388
|
+
"Get Association By Subject Category Search"
|
|
389
|
+
]
|
|
390
|
+
}
|
|
391
|
+
}
|
|
392
|
+
},
|
|
393
|
+
{
|
|
394
|
+
"displayName": "Exclude Automatic Assertions",
|
|
395
|
+
"name": "exclude_automatic_assertions",
|
|
396
|
+
"description": "If true, excludes associations that involve IEAs (ECO:0000501)",
|
|
397
|
+
"default": false,
|
|
398
|
+
"type": "boolean",
|
|
399
|
+
"routing": {
|
|
400
|
+
"send": {
|
|
401
|
+
"type": "query",
|
|
402
|
+
"property": "exclude_automatic_assertions",
|
|
403
|
+
"value": "={{ $value }}",
|
|
404
|
+
"propertyInDotNotation": false
|
|
405
|
+
}
|
|
406
|
+
},
|
|
407
|
+
"displayOptions": {
|
|
408
|
+
"show": {
|
|
409
|
+
"resource": [
|
|
410
|
+
"Association"
|
|
411
|
+
],
|
|
412
|
+
"operation": [
|
|
413
|
+
"Get Association By Subject Category Search"
|
|
414
|
+
]
|
|
415
|
+
}
|
|
416
|
+
}
|
|
417
|
+
},
|
|
418
|
+
{
|
|
419
|
+
"displayName": "Use Compact Associations",
|
|
420
|
+
"name": "use_compact_associations",
|
|
421
|
+
"description": "If true, returns results in compact associations format",
|
|
422
|
+
"default": false,
|
|
423
|
+
"type": "boolean",
|
|
424
|
+
"routing": {
|
|
425
|
+
"send": {
|
|
426
|
+
"type": "query",
|
|
427
|
+
"property": "use_compact_associations",
|
|
428
|
+
"value": "={{ $value }}",
|
|
429
|
+
"propertyInDotNotation": false
|
|
430
|
+
}
|
|
431
|
+
},
|
|
432
|
+
"displayOptions": {
|
|
433
|
+
"show": {
|
|
434
|
+
"resource": [
|
|
435
|
+
"Association"
|
|
436
|
+
],
|
|
437
|
+
"operation": [
|
|
438
|
+
"Get Association By Subject Category Search"
|
|
439
|
+
]
|
|
440
|
+
}
|
|
441
|
+
}
|
|
442
|
+
},
|
|
443
|
+
{
|
|
444
|
+
"displayName": "Subject Taxon",
|
|
445
|
+
"name": "subject_taxon",
|
|
446
|
+
"description": "Subject taxon ID, e.g. NCBITaxon:9606 (Includes inferred associations, by default)",
|
|
447
|
+
"default": "",
|
|
448
|
+
"type": "string",
|
|
449
|
+
"routing": {
|
|
450
|
+
"send": {
|
|
451
|
+
"type": "query",
|
|
452
|
+
"property": "subject_taxon",
|
|
453
|
+
"value": "={{ $value }}",
|
|
454
|
+
"propertyInDotNotation": false
|
|
455
|
+
}
|
|
456
|
+
},
|
|
457
|
+
"displayOptions": {
|
|
458
|
+
"show": {
|
|
459
|
+
"resource": [
|
|
460
|
+
"Association"
|
|
461
|
+
],
|
|
462
|
+
"operation": [
|
|
463
|
+
"Get Association By Subject Category Search"
|
|
464
|
+
]
|
|
465
|
+
}
|
|
466
|
+
}
|
|
467
|
+
},
|
|
468
|
+
{
|
|
469
|
+
"displayName": "Object Taxon",
|
|
470
|
+
"name": "object_taxon",
|
|
471
|
+
"description": "Object taxon ID, e.g. NCBITaxon:10090 (Includes inferred associations, by default)",
|
|
472
|
+
"default": "",
|
|
473
|
+
"type": "string",
|
|
474
|
+
"routing": {
|
|
475
|
+
"send": {
|
|
476
|
+
"type": "query",
|
|
477
|
+
"property": "object_taxon",
|
|
478
|
+
"value": "={{ $value }}",
|
|
479
|
+
"propertyInDotNotation": false
|
|
480
|
+
}
|
|
481
|
+
},
|
|
482
|
+
"displayOptions": {
|
|
483
|
+
"show": {
|
|
484
|
+
"resource": [
|
|
485
|
+
"Association"
|
|
486
|
+
],
|
|
487
|
+
"operation": [
|
|
488
|
+
"Get Association By Subject Category Search"
|
|
489
|
+
]
|
|
490
|
+
}
|
|
491
|
+
}
|
|
492
|
+
},
|
|
493
|
+
{
|
|
494
|
+
"displayName": "Relation",
|
|
495
|
+
"name": "relation",
|
|
496
|
+
"description": "Filter by relation CURIE, e.g. RO:0002200 (has_phenotype), RO:0002607 (is marker for), RO:HOM0000017 (orthologous to), etc.",
|
|
497
|
+
"default": "",
|
|
498
|
+
"type": "string",
|
|
499
|
+
"routing": {
|
|
500
|
+
"send": {
|
|
501
|
+
"type": "query",
|
|
502
|
+
"property": "relation",
|
|
503
|
+
"value": "={{ $value }}",
|
|
504
|
+
"propertyInDotNotation": false
|
|
505
|
+
}
|
|
506
|
+
},
|
|
507
|
+
"displayOptions": {
|
|
508
|
+
"show": {
|
|
509
|
+
"resource": [
|
|
510
|
+
"Association"
|
|
511
|
+
],
|
|
512
|
+
"operation": [
|
|
513
|
+
"Get Association By Subject Category Search"
|
|
514
|
+
]
|
|
515
|
+
}
|
|
516
|
+
}
|
|
517
|
+
},
|
|
518
|
+
{
|
|
519
|
+
"displayName": "GET /association/find/{subject_category}/{object_category}",
|
|
520
|
+
"name": "operation",
|
|
521
|
+
"type": "notice",
|
|
522
|
+
"typeOptions": {
|
|
523
|
+
"theme": "info"
|
|
524
|
+
},
|
|
525
|
+
"default": "",
|
|
526
|
+
"displayOptions": {
|
|
527
|
+
"show": {
|
|
528
|
+
"resource": [
|
|
529
|
+
"Association"
|
|
530
|
+
],
|
|
531
|
+
"operation": [
|
|
532
|
+
"Get Association By Subject And Object Category Search"
|
|
533
|
+
]
|
|
534
|
+
}
|
|
535
|
+
}
|
|
536
|
+
},
|
|
537
|
+
{
|
|
538
|
+
"displayName": "Rows",
|
|
539
|
+
"name": "rows",
|
|
540
|
+
"description": "number of rows",
|
|
541
|
+
"default": 100,
|
|
542
|
+
"type": "number",
|
|
543
|
+
"routing": {
|
|
544
|
+
"send": {
|
|
545
|
+
"type": "query",
|
|
546
|
+
"property": "rows",
|
|
547
|
+
"value": "={{ $value }}",
|
|
548
|
+
"propertyInDotNotation": false
|
|
549
|
+
}
|
|
550
|
+
},
|
|
551
|
+
"displayOptions": {
|
|
552
|
+
"show": {
|
|
553
|
+
"resource": [
|
|
554
|
+
"Association"
|
|
555
|
+
],
|
|
556
|
+
"operation": [
|
|
557
|
+
"Get Association By Subject And Object Category Search"
|
|
558
|
+
]
|
|
559
|
+
}
|
|
560
|
+
}
|
|
561
|
+
},
|
|
562
|
+
{
|
|
563
|
+
"displayName": "Start",
|
|
564
|
+
"name": "start",
|
|
565
|
+
"description": "beginning row",
|
|
566
|
+
"default": 0,
|
|
567
|
+
"type": "number",
|
|
568
|
+
"routing": {
|
|
569
|
+
"send": {
|
|
570
|
+
"type": "query",
|
|
571
|
+
"property": "start",
|
|
572
|
+
"value": "={{ $value }}",
|
|
573
|
+
"propertyInDotNotation": false
|
|
574
|
+
}
|
|
575
|
+
},
|
|
576
|
+
"displayOptions": {
|
|
577
|
+
"show": {
|
|
578
|
+
"resource": [
|
|
579
|
+
"Association"
|
|
580
|
+
],
|
|
581
|
+
"operation": [
|
|
582
|
+
"Get Association By Subject And Object Category Search"
|
|
583
|
+
]
|
|
584
|
+
}
|
|
585
|
+
}
|
|
586
|
+
},
|
|
587
|
+
{
|
|
588
|
+
"displayName": "Evidence",
|
|
589
|
+
"name": "evidence",
|
|
590
|
+
"description": "Object id, e.g. ECO:0000501 (for IEA; Includes inferred by default) or a specific publication or other supporting object, e.g. ZFIN:ZDB-PUB-060503-2",
|
|
591
|
+
"default": "",
|
|
592
|
+
"type": "string",
|
|
593
|
+
"routing": {
|
|
594
|
+
"send": {
|
|
595
|
+
"type": "query",
|
|
596
|
+
"property": "evidence",
|
|
597
|
+
"value": "={{ $value }}",
|
|
598
|
+
"propertyInDotNotation": false
|
|
599
|
+
}
|
|
600
|
+
},
|
|
601
|
+
"displayOptions": {
|
|
602
|
+
"show": {
|
|
603
|
+
"resource": [
|
|
604
|
+
"Association"
|
|
605
|
+
],
|
|
606
|
+
"operation": [
|
|
607
|
+
"Get Association By Subject And Object Category Search"
|
|
608
|
+
]
|
|
609
|
+
}
|
|
610
|
+
}
|
|
611
|
+
},
|
|
612
|
+
{
|
|
613
|
+
"displayName": "Unselect Evidence",
|
|
614
|
+
"name": "unselect_evidence",
|
|
615
|
+
"description": "If true, excludes evidence objects in response",
|
|
616
|
+
"default": false,
|
|
617
|
+
"type": "boolean",
|
|
618
|
+
"routing": {
|
|
619
|
+
"send": {
|
|
620
|
+
"type": "query",
|
|
621
|
+
"property": "unselect_evidence",
|
|
622
|
+
"value": "={{ $value }}",
|
|
623
|
+
"propertyInDotNotation": false
|
|
624
|
+
}
|
|
625
|
+
},
|
|
626
|
+
"displayOptions": {
|
|
627
|
+
"show": {
|
|
628
|
+
"resource": [
|
|
629
|
+
"Association"
|
|
630
|
+
],
|
|
631
|
+
"operation": [
|
|
632
|
+
"Get Association By Subject And Object Category Search"
|
|
633
|
+
]
|
|
634
|
+
}
|
|
635
|
+
}
|
|
636
|
+
},
|
|
637
|
+
{
|
|
638
|
+
"displayName": "Exclude Automatic Assertions",
|
|
639
|
+
"name": "exclude_automatic_assertions",
|
|
640
|
+
"description": "If true, excludes associations that involve IEAs (ECO:0000501)",
|
|
641
|
+
"default": false,
|
|
642
|
+
"type": "boolean",
|
|
643
|
+
"routing": {
|
|
644
|
+
"send": {
|
|
645
|
+
"type": "query",
|
|
646
|
+
"property": "exclude_automatic_assertions",
|
|
647
|
+
"value": "={{ $value }}",
|
|
648
|
+
"propertyInDotNotation": false
|
|
649
|
+
}
|
|
650
|
+
},
|
|
651
|
+
"displayOptions": {
|
|
652
|
+
"show": {
|
|
653
|
+
"resource": [
|
|
654
|
+
"Association"
|
|
655
|
+
],
|
|
656
|
+
"operation": [
|
|
657
|
+
"Get Association By Subject And Object Category Search"
|
|
658
|
+
]
|
|
659
|
+
}
|
|
660
|
+
}
|
|
661
|
+
},
|
|
662
|
+
{
|
|
663
|
+
"displayName": "Use Compact Associations",
|
|
664
|
+
"name": "use_compact_associations",
|
|
665
|
+
"description": "If true, returns results in compact associations format",
|
|
666
|
+
"default": false,
|
|
667
|
+
"type": "boolean",
|
|
668
|
+
"routing": {
|
|
669
|
+
"send": {
|
|
670
|
+
"type": "query",
|
|
671
|
+
"property": "use_compact_associations",
|
|
672
|
+
"value": "={{ $value }}",
|
|
673
|
+
"propertyInDotNotation": false
|
|
674
|
+
}
|
|
675
|
+
},
|
|
676
|
+
"displayOptions": {
|
|
677
|
+
"show": {
|
|
678
|
+
"resource": [
|
|
679
|
+
"Association"
|
|
680
|
+
],
|
|
681
|
+
"operation": [
|
|
682
|
+
"Get Association By Subject And Object Category Search"
|
|
683
|
+
]
|
|
684
|
+
}
|
|
685
|
+
}
|
|
686
|
+
},
|
|
687
|
+
{
|
|
688
|
+
"displayName": "Subject",
|
|
689
|
+
"name": "subject",
|
|
690
|
+
"description": "Subject CURIE",
|
|
691
|
+
"default": "",
|
|
692
|
+
"type": "string",
|
|
693
|
+
"routing": {
|
|
694
|
+
"send": {
|
|
695
|
+
"type": "query",
|
|
696
|
+
"property": "subject",
|
|
697
|
+
"value": "={{ $value }}",
|
|
698
|
+
"propertyInDotNotation": false
|
|
699
|
+
}
|
|
700
|
+
},
|
|
701
|
+
"displayOptions": {
|
|
702
|
+
"show": {
|
|
703
|
+
"resource": [
|
|
704
|
+
"Association"
|
|
705
|
+
],
|
|
706
|
+
"operation": [
|
|
707
|
+
"Get Association By Subject And Object Category Search"
|
|
708
|
+
]
|
|
709
|
+
}
|
|
710
|
+
}
|
|
711
|
+
},
|
|
712
|
+
{
|
|
713
|
+
"displayName": "Object",
|
|
714
|
+
"name": "object",
|
|
715
|
+
"description": "Object CURIE",
|
|
716
|
+
"default": "",
|
|
717
|
+
"type": "string",
|
|
718
|
+
"routing": {
|
|
719
|
+
"send": {
|
|
720
|
+
"type": "query",
|
|
721
|
+
"property": "object",
|
|
722
|
+
"value": "={{ $value }}",
|
|
723
|
+
"propertyInDotNotation": false
|
|
724
|
+
}
|
|
725
|
+
},
|
|
726
|
+
"displayOptions": {
|
|
727
|
+
"show": {
|
|
728
|
+
"resource": [
|
|
729
|
+
"Association"
|
|
730
|
+
],
|
|
731
|
+
"operation": [
|
|
732
|
+
"Get Association By Subject And Object Category Search"
|
|
733
|
+
]
|
|
734
|
+
}
|
|
735
|
+
}
|
|
736
|
+
},
|
|
737
|
+
{
|
|
738
|
+
"displayName": "Subject Taxon",
|
|
739
|
+
"name": "subject_taxon",
|
|
740
|
+
"description": "Subject taxon ID, e.g. NCBITaxon:9606 (Includes inferred associations, by default)",
|
|
741
|
+
"default": "",
|
|
742
|
+
"type": "string",
|
|
743
|
+
"routing": {
|
|
744
|
+
"send": {
|
|
745
|
+
"type": "query",
|
|
746
|
+
"property": "subject_taxon",
|
|
747
|
+
"value": "={{ $value }}",
|
|
748
|
+
"propertyInDotNotation": false
|
|
749
|
+
}
|
|
750
|
+
},
|
|
751
|
+
"displayOptions": {
|
|
752
|
+
"show": {
|
|
753
|
+
"resource": [
|
|
754
|
+
"Association"
|
|
755
|
+
],
|
|
756
|
+
"operation": [
|
|
757
|
+
"Get Association By Subject And Object Category Search"
|
|
758
|
+
]
|
|
759
|
+
}
|
|
760
|
+
}
|
|
761
|
+
},
|
|
762
|
+
{
|
|
763
|
+
"displayName": "Object Taxon",
|
|
764
|
+
"name": "object_taxon",
|
|
765
|
+
"description": "Object taxon ID, e.g. NCBITaxon:10090 (Includes inferred associations, by default)",
|
|
766
|
+
"default": "",
|
|
767
|
+
"type": "string",
|
|
768
|
+
"routing": {
|
|
769
|
+
"send": {
|
|
770
|
+
"type": "query",
|
|
771
|
+
"property": "object_taxon",
|
|
772
|
+
"value": "={{ $value }}",
|
|
773
|
+
"propertyInDotNotation": false
|
|
774
|
+
}
|
|
775
|
+
},
|
|
776
|
+
"displayOptions": {
|
|
777
|
+
"show": {
|
|
778
|
+
"resource": [
|
|
779
|
+
"Association"
|
|
780
|
+
],
|
|
781
|
+
"operation": [
|
|
782
|
+
"Get Association By Subject And Object Category Search"
|
|
783
|
+
]
|
|
784
|
+
}
|
|
785
|
+
}
|
|
786
|
+
},
|
|
787
|
+
{
|
|
788
|
+
"displayName": "Relation",
|
|
789
|
+
"name": "relation",
|
|
790
|
+
"description": "Filter by relation CURIE, e.g. RO:0002200 (has_phenotype), RO:0002607 (is marker for), RO:HOM0000017 (orthologous to), etc.",
|
|
791
|
+
"default": "",
|
|
792
|
+
"type": "string",
|
|
793
|
+
"routing": {
|
|
794
|
+
"send": {
|
|
795
|
+
"type": "query",
|
|
796
|
+
"property": "relation",
|
|
797
|
+
"value": "={{ $value }}",
|
|
798
|
+
"propertyInDotNotation": false
|
|
799
|
+
}
|
|
800
|
+
},
|
|
801
|
+
"displayOptions": {
|
|
802
|
+
"show": {
|
|
803
|
+
"resource": [
|
|
804
|
+
"Association"
|
|
805
|
+
],
|
|
806
|
+
"operation": [
|
|
807
|
+
"Get Association By Subject And Object Category Search"
|
|
808
|
+
]
|
|
809
|
+
}
|
|
810
|
+
}
|
|
811
|
+
},
|
|
812
|
+
{
|
|
813
|
+
"displayName": "GET /association/from/{subject}",
|
|
814
|
+
"name": "operation",
|
|
815
|
+
"type": "notice",
|
|
816
|
+
"typeOptions": {
|
|
817
|
+
"theme": "info"
|
|
818
|
+
},
|
|
819
|
+
"default": "",
|
|
820
|
+
"displayOptions": {
|
|
821
|
+
"show": {
|
|
822
|
+
"resource": [
|
|
823
|
+
"Association"
|
|
824
|
+
],
|
|
825
|
+
"operation": [
|
|
826
|
+
"Get Associations From"
|
|
827
|
+
]
|
|
828
|
+
}
|
|
829
|
+
}
|
|
830
|
+
},
|
|
831
|
+
{
|
|
832
|
+
"displayName": "Rows",
|
|
833
|
+
"name": "rows",
|
|
834
|
+
"description": "number of rows",
|
|
835
|
+
"default": 100,
|
|
836
|
+
"type": "number",
|
|
837
|
+
"routing": {
|
|
838
|
+
"send": {
|
|
839
|
+
"type": "query",
|
|
840
|
+
"property": "rows",
|
|
841
|
+
"value": "={{ $value }}",
|
|
842
|
+
"propertyInDotNotation": false
|
|
843
|
+
}
|
|
844
|
+
},
|
|
845
|
+
"displayOptions": {
|
|
846
|
+
"show": {
|
|
847
|
+
"resource": [
|
|
848
|
+
"Association"
|
|
849
|
+
],
|
|
850
|
+
"operation": [
|
|
851
|
+
"Get Associations From"
|
|
852
|
+
]
|
|
853
|
+
}
|
|
854
|
+
}
|
|
855
|
+
},
|
|
856
|
+
{
|
|
857
|
+
"displayName": "Start",
|
|
858
|
+
"name": "start",
|
|
859
|
+
"description": "beginning row",
|
|
860
|
+
"default": 0,
|
|
861
|
+
"type": "number",
|
|
862
|
+
"routing": {
|
|
863
|
+
"send": {
|
|
864
|
+
"type": "query",
|
|
865
|
+
"property": "start",
|
|
866
|
+
"value": "={{ $value }}",
|
|
867
|
+
"propertyInDotNotation": false
|
|
868
|
+
}
|
|
869
|
+
},
|
|
870
|
+
"displayOptions": {
|
|
871
|
+
"show": {
|
|
872
|
+
"resource": [
|
|
873
|
+
"Association"
|
|
874
|
+
],
|
|
875
|
+
"operation": [
|
|
876
|
+
"Get Associations From"
|
|
877
|
+
]
|
|
878
|
+
}
|
|
879
|
+
}
|
|
880
|
+
},
|
|
881
|
+
{
|
|
882
|
+
"displayName": "Evidence",
|
|
883
|
+
"name": "evidence",
|
|
884
|
+
"description": "Object id, e.g. ECO:0000501 (for IEA; Includes inferred by default) or a specific publication or other supporting object, e.g. ZFIN:ZDB-PUB-060503-2",
|
|
885
|
+
"default": "",
|
|
886
|
+
"type": "string",
|
|
887
|
+
"routing": {
|
|
888
|
+
"send": {
|
|
889
|
+
"type": "query",
|
|
890
|
+
"property": "evidence",
|
|
891
|
+
"value": "={{ $value }}",
|
|
892
|
+
"propertyInDotNotation": false
|
|
893
|
+
}
|
|
894
|
+
},
|
|
895
|
+
"displayOptions": {
|
|
896
|
+
"show": {
|
|
897
|
+
"resource": [
|
|
898
|
+
"Association"
|
|
899
|
+
],
|
|
900
|
+
"operation": [
|
|
901
|
+
"Get Associations From"
|
|
902
|
+
]
|
|
903
|
+
}
|
|
904
|
+
}
|
|
905
|
+
},
|
|
906
|
+
{
|
|
907
|
+
"displayName": "Unselect Evidence",
|
|
908
|
+
"name": "unselect_evidence",
|
|
909
|
+
"description": "If true, excludes evidence objects in response",
|
|
910
|
+
"default": false,
|
|
911
|
+
"type": "boolean",
|
|
912
|
+
"routing": {
|
|
913
|
+
"send": {
|
|
914
|
+
"type": "query",
|
|
915
|
+
"property": "unselect_evidence",
|
|
916
|
+
"value": "={{ $value }}",
|
|
917
|
+
"propertyInDotNotation": false
|
|
918
|
+
}
|
|
919
|
+
},
|
|
920
|
+
"displayOptions": {
|
|
921
|
+
"show": {
|
|
922
|
+
"resource": [
|
|
923
|
+
"Association"
|
|
924
|
+
],
|
|
925
|
+
"operation": [
|
|
926
|
+
"Get Associations From"
|
|
927
|
+
]
|
|
928
|
+
}
|
|
929
|
+
}
|
|
930
|
+
},
|
|
931
|
+
{
|
|
932
|
+
"displayName": "Exclude Automatic Assertions",
|
|
933
|
+
"name": "exclude_automatic_assertions",
|
|
934
|
+
"description": "If true, excludes associations that involve IEAs (ECO:0000501)",
|
|
935
|
+
"default": false,
|
|
936
|
+
"type": "boolean",
|
|
937
|
+
"routing": {
|
|
938
|
+
"send": {
|
|
939
|
+
"type": "query",
|
|
940
|
+
"property": "exclude_automatic_assertions",
|
|
941
|
+
"value": "={{ $value }}",
|
|
942
|
+
"propertyInDotNotation": false
|
|
943
|
+
}
|
|
944
|
+
},
|
|
945
|
+
"displayOptions": {
|
|
946
|
+
"show": {
|
|
947
|
+
"resource": [
|
|
948
|
+
"Association"
|
|
949
|
+
],
|
|
950
|
+
"operation": [
|
|
951
|
+
"Get Associations From"
|
|
952
|
+
]
|
|
953
|
+
}
|
|
954
|
+
}
|
|
955
|
+
},
|
|
956
|
+
{
|
|
957
|
+
"displayName": "Use Compact Associations",
|
|
958
|
+
"name": "use_compact_associations",
|
|
959
|
+
"description": "If true, returns results in compact associations format",
|
|
960
|
+
"default": false,
|
|
961
|
+
"type": "boolean",
|
|
962
|
+
"routing": {
|
|
963
|
+
"send": {
|
|
964
|
+
"type": "query",
|
|
965
|
+
"property": "use_compact_associations",
|
|
966
|
+
"value": "={{ $value }}",
|
|
967
|
+
"propertyInDotNotation": false
|
|
968
|
+
}
|
|
969
|
+
},
|
|
970
|
+
"displayOptions": {
|
|
971
|
+
"show": {
|
|
972
|
+
"resource": [
|
|
973
|
+
"Association"
|
|
974
|
+
],
|
|
975
|
+
"operation": [
|
|
976
|
+
"Get Associations From"
|
|
977
|
+
]
|
|
978
|
+
}
|
|
979
|
+
}
|
|
980
|
+
},
|
|
981
|
+
{
|
|
982
|
+
"displayName": "Object Taxon",
|
|
983
|
+
"name": "object_taxon",
|
|
984
|
+
"description": "Object taxon ID, e.g. NCBITaxon:10090 (Includes inferred associations, by default)",
|
|
985
|
+
"default": "",
|
|
986
|
+
"type": "string",
|
|
987
|
+
"routing": {
|
|
988
|
+
"send": {
|
|
989
|
+
"type": "query",
|
|
990
|
+
"property": "object_taxon",
|
|
991
|
+
"value": "={{ $value }}",
|
|
992
|
+
"propertyInDotNotation": false
|
|
993
|
+
}
|
|
994
|
+
},
|
|
995
|
+
"displayOptions": {
|
|
996
|
+
"show": {
|
|
997
|
+
"resource": [
|
|
998
|
+
"Association"
|
|
999
|
+
],
|
|
1000
|
+
"operation": [
|
|
1001
|
+
"Get Associations From"
|
|
1002
|
+
]
|
|
1003
|
+
}
|
|
1004
|
+
}
|
|
1005
|
+
},
|
|
1006
|
+
{
|
|
1007
|
+
"displayName": "Relation",
|
|
1008
|
+
"name": "relation",
|
|
1009
|
+
"description": "Filter by relation CURIE, e.g. RO:0002200 (has_phenotype), RO:0002607 (is marker for), RO:HOM0000017 (orthologous to), etc.",
|
|
1010
|
+
"default": "",
|
|
1011
|
+
"type": "string",
|
|
1012
|
+
"routing": {
|
|
1013
|
+
"send": {
|
|
1014
|
+
"type": "query",
|
|
1015
|
+
"property": "relation",
|
|
1016
|
+
"value": "={{ $value }}",
|
|
1017
|
+
"propertyInDotNotation": false
|
|
1018
|
+
}
|
|
1019
|
+
},
|
|
1020
|
+
"displayOptions": {
|
|
1021
|
+
"show": {
|
|
1022
|
+
"resource": [
|
|
1023
|
+
"Association"
|
|
1024
|
+
],
|
|
1025
|
+
"operation": [
|
|
1026
|
+
"Get Associations From"
|
|
1027
|
+
]
|
|
1028
|
+
}
|
|
1029
|
+
}
|
|
1030
|
+
},
|
|
1031
|
+
{
|
|
1032
|
+
"displayName": "GET /association/to/{object}",
|
|
1033
|
+
"name": "operation",
|
|
1034
|
+
"type": "notice",
|
|
1035
|
+
"typeOptions": {
|
|
1036
|
+
"theme": "info"
|
|
1037
|
+
},
|
|
1038
|
+
"default": "",
|
|
1039
|
+
"displayOptions": {
|
|
1040
|
+
"show": {
|
|
1041
|
+
"resource": [
|
|
1042
|
+
"Association"
|
|
1043
|
+
],
|
|
1044
|
+
"operation": [
|
|
1045
|
+
"Get Associations To"
|
|
1046
|
+
]
|
|
1047
|
+
}
|
|
1048
|
+
}
|
|
1049
|
+
},
|
|
1050
|
+
{
|
|
1051
|
+
"displayName": "Rows",
|
|
1052
|
+
"name": "rows",
|
|
1053
|
+
"description": "number of rows",
|
|
1054
|
+
"default": 100,
|
|
1055
|
+
"type": "number",
|
|
1056
|
+
"routing": {
|
|
1057
|
+
"send": {
|
|
1058
|
+
"type": "query",
|
|
1059
|
+
"property": "rows",
|
|
1060
|
+
"value": "={{ $value }}",
|
|
1061
|
+
"propertyInDotNotation": false
|
|
1062
|
+
}
|
|
1063
|
+
},
|
|
1064
|
+
"displayOptions": {
|
|
1065
|
+
"show": {
|
|
1066
|
+
"resource": [
|
|
1067
|
+
"Association"
|
|
1068
|
+
],
|
|
1069
|
+
"operation": [
|
|
1070
|
+
"Get Associations To"
|
|
1071
|
+
]
|
|
1072
|
+
}
|
|
1073
|
+
}
|
|
1074
|
+
},
|
|
1075
|
+
{
|
|
1076
|
+
"displayName": "Start",
|
|
1077
|
+
"name": "start",
|
|
1078
|
+
"description": "beginning row",
|
|
1079
|
+
"default": 0,
|
|
1080
|
+
"type": "number",
|
|
1081
|
+
"routing": {
|
|
1082
|
+
"send": {
|
|
1083
|
+
"type": "query",
|
|
1084
|
+
"property": "start",
|
|
1085
|
+
"value": "={{ $value }}",
|
|
1086
|
+
"propertyInDotNotation": false
|
|
1087
|
+
}
|
|
1088
|
+
},
|
|
1089
|
+
"displayOptions": {
|
|
1090
|
+
"show": {
|
|
1091
|
+
"resource": [
|
|
1092
|
+
"Association"
|
|
1093
|
+
],
|
|
1094
|
+
"operation": [
|
|
1095
|
+
"Get Associations To"
|
|
1096
|
+
]
|
|
1097
|
+
}
|
|
1098
|
+
}
|
|
1099
|
+
},
|
|
1100
|
+
{
|
|
1101
|
+
"displayName": "Evidence",
|
|
1102
|
+
"name": "evidence",
|
|
1103
|
+
"description": "Object id, e.g. ECO:0000501 (for IEA; Includes inferred by default) or a specific publication or other supporting object, e.g. ZFIN:ZDB-PUB-060503-2",
|
|
1104
|
+
"default": "",
|
|
1105
|
+
"type": "string",
|
|
1106
|
+
"routing": {
|
|
1107
|
+
"send": {
|
|
1108
|
+
"type": "query",
|
|
1109
|
+
"property": "evidence",
|
|
1110
|
+
"value": "={{ $value }}",
|
|
1111
|
+
"propertyInDotNotation": false
|
|
1112
|
+
}
|
|
1113
|
+
},
|
|
1114
|
+
"displayOptions": {
|
|
1115
|
+
"show": {
|
|
1116
|
+
"resource": [
|
|
1117
|
+
"Association"
|
|
1118
|
+
],
|
|
1119
|
+
"operation": [
|
|
1120
|
+
"Get Associations To"
|
|
1121
|
+
]
|
|
1122
|
+
}
|
|
1123
|
+
}
|
|
1124
|
+
},
|
|
1125
|
+
{
|
|
1126
|
+
"displayName": "Unselect Evidence",
|
|
1127
|
+
"name": "unselect_evidence",
|
|
1128
|
+
"description": "If true, excludes evidence objects in response",
|
|
1129
|
+
"default": false,
|
|
1130
|
+
"type": "boolean",
|
|
1131
|
+
"routing": {
|
|
1132
|
+
"send": {
|
|
1133
|
+
"type": "query",
|
|
1134
|
+
"property": "unselect_evidence",
|
|
1135
|
+
"value": "={{ $value }}",
|
|
1136
|
+
"propertyInDotNotation": false
|
|
1137
|
+
}
|
|
1138
|
+
},
|
|
1139
|
+
"displayOptions": {
|
|
1140
|
+
"show": {
|
|
1141
|
+
"resource": [
|
|
1142
|
+
"Association"
|
|
1143
|
+
],
|
|
1144
|
+
"operation": [
|
|
1145
|
+
"Get Associations To"
|
|
1146
|
+
]
|
|
1147
|
+
}
|
|
1148
|
+
}
|
|
1149
|
+
},
|
|
1150
|
+
{
|
|
1151
|
+
"displayName": "Exclude Automatic Assertions",
|
|
1152
|
+
"name": "exclude_automatic_assertions",
|
|
1153
|
+
"description": "If true, excludes associations that involve IEAs (ECO:0000501)",
|
|
1154
|
+
"default": false,
|
|
1155
|
+
"type": "boolean",
|
|
1156
|
+
"routing": {
|
|
1157
|
+
"send": {
|
|
1158
|
+
"type": "query",
|
|
1159
|
+
"property": "exclude_automatic_assertions",
|
|
1160
|
+
"value": "={{ $value }}",
|
|
1161
|
+
"propertyInDotNotation": false
|
|
1162
|
+
}
|
|
1163
|
+
},
|
|
1164
|
+
"displayOptions": {
|
|
1165
|
+
"show": {
|
|
1166
|
+
"resource": [
|
|
1167
|
+
"Association"
|
|
1168
|
+
],
|
|
1169
|
+
"operation": [
|
|
1170
|
+
"Get Associations To"
|
|
1171
|
+
]
|
|
1172
|
+
}
|
|
1173
|
+
}
|
|
1174
|
+
},
|
|
1175
|
+
{
|
|
1176
|
+
"displayName": "Use Compact Associations",
|
|
1177
|
+
"name": "use_compact_associations",
|
|
1178
|
+
"description": "If true, returns results in compact associations format",
|
|
1179
|
+
"default": false,
|
|
1180
|
+
"type": "boolean",
|
|
1181
|
+
"routing": {
|
|
1182
|
+
"send": {
|
|
1183
|
+
"type": "query",
|
|
1184
|
+
"property": "use_compact_associations",
|
|
1185
|
+
"value": "={{ $value }}",
|
|
1186
|
+
"propertyInDotNotation": false
|
|
1187
|
+
}
|
|
1188
|
+
},
|
|
1189
|
+
"displayOptions": {
|
|
1190
|
+
"show": {
|
|
1191
|
+
"resource": [
|
|
1192
|
+
"Association"
|
|
1193
|
+
],
|
|
1194
|
+
"operation": [
|
|
1195
|
+
"Get Associations To"
|
|
1196
|
+
]
|
|
1197
|
+
}
|
|
1198
|
+
}
|
|
1199
|
+
},
|
|
1200
|
+
{
|
|
1201
|
+
"displayName": "GET /association/type/{association_type}",
|
|
1202
|
+
"name": "operation",
|
|
1203
|
+
"type": "notice",
|
|
1204
|
+
"typeOptions": {
|
|
1205
|
+
"theme": "info"
|
|
1206
|
+
},
|
|
1207
|
+
"default": "",
|
|
1208
|
+
"displayOptions": {
|
|
1209
|
+
"show": {
|
|
1210
|
+
"resource": [
|
|
1211
|
+
"Association"
|
|
1212
|
+
],
|
|
1213
|
+
"operation": [
|
|
1214
|
+
"Get Association By Subject And Assoc Type"
|
|
1215
|
+
]
|
|
1216
|
+
}
|
|
1217
|
+
}
|
|
1218
|
+
},
|
|
1219
|
+
{
|
|
1220
|
+
"displayName": "Rows",
|
|
1221
|
+
"name": "rows",
|
|
1222
|
+
"description": "number of rows",
|
|
1223
|
+
"default": 100,
|
|
1224
|
+
"type": "number",
|
|
1225
|
+
"routing": {
|
|
1226
|
+
"send": {
|
|
1227
|
+
"type": "query",
|
|
1228
|
+
"property": "rows",
|
|
1229
|
+
"value": "={{ $value }}",
|
|
1230
|
+
"propertyInDotNotation": false
|
|
1231
|
+
}
|
|
1232
|
+
},
|
|
1233
|
+
"displayOptions": {
|
|
1234
|
+
"show": {
|
|
1235
|
+
"resource": [
|
|
1236
|
+
"Association"
|
|
1237
|
+
],
|
|
1238
|
+
"operation": [
|
|
1239
|
+
"Get Association By Subject And Assoc Type"
|
|
1240
|
+
]
|
|
1241
|
+
}
|
|
1242
|
+
}
|
|
1243
|
+
},
|
|
1244
|
+
{
|
|
1245
|
+
"displayName": "Start",
|
|
1246
|
+
"name": "start",
|
|
1247
|
+
"description": "beginning row",
|
|
1248
|
+
"default": 0,
|
|
1249
|
+
"type": "number",
|
|
1250
|
+
"routing": {
|
|
1251
|
+
"send": {
|
|
1252
|
+
"type": "query",
|
|
1253
|
+
"property": "start",
|
|
1254
|
+
"value": "={{ $value }}",
|
|
1255
|
+
"propertyInDotNotation": false
|
|
1256
|
+
}
|
|
1257
|
+
},
|
|
1258
|
+
"displayOptions": {
|
|
1259
|
+
"show": {
|
|
1260
|
+
"resource": [
|
|
1261
|
+
"Association"
|
|
1262
|
+
],
|
|
1263
|
+
"operation": [
|
|
1264
|
+
"Get Association By Subject And Assoc Type"
|
|
1265
|
+
]
|
|
1266
|
+
}
|
|
1267
|
+
}
|
|
1268
|
+
},
|
|
1269
|
+
{
|
|
1270
|
+
"displayName": "Evidence",
|
|
1271
|
+
"name": "evidence",
|
|
1272
|
+
"description": "Object id, e.g. ECO:0000501 (for IEA; Includes inferred by default) or a specific publication or other supporting object, e.g. ZFIN:ZDB-PUB-060503-2",
|
|
1273
|
+
"default": "",
|
|
1274
|
+
"type": "string",
|
|
1275
|
+
"routing": {
|
|
1276
|
+
"send": {
|
|
1277
|
+
"type": "query",
|
|
1278
|
+
"property": "evidence",
|
|
1279
|
+
"value": "={{ $value }}",
|
|
1280
|
+
"propertyInDotNotation": false
|
|
1281
|
+
}
|
|
1282
|
+
},
|
|
1283
|
+
"displayOptions": {
|
|
1284
|
+
"show": {
|
|
1285
|
+
"resource": [
|
|
1286
|
+
"Association"
|
|
1287
|
+
],
|
|
1288
|
+
"operation": [
|
|
1289
|
+
"Get Association By Subject And Assoc Type"
|
|
1290
|
+
]
|
|
1291
|
+
}
|
|
1292
|
+
}
|
|
1293
|
+
},
|
|
1294
|
+
{
|
|
1295
|
+
"displayName": "Unselect Evidence",
|
|
1296
|
+
"name": "unselect_evidence",
|
|
1297
|
+
"description": "If true, excludes evidence objects in response",
|
|
1298
|
+
"default": false,
|
|
1299
|
+
"type": "boolean",
|
|
1300
|
+
"routing": {
|
|
1301
|
+
"send": {
|
|
1302
|
+
"type": "query",
|
|
1303
|
+
"property": "unselect_evidence",
|
|
1304
|
+
"value": "={{ $value }}",
|
|
1305
|
+
"propertyInDotNotation": false
|
|
1306
|
+
}
|
|
1307
|
+
},
|
|
1308
|
+
"displayOptions": {
|
|
1309
|
+
"show": {
|
|
1310
|
+
"resource": [
|
|
1311
|
+
"Association"
|
|
1312
|
+
],
|
|
1313
|
+
"operation": [
|
|
1314
|
+
"Get Association By Subject And Assoc Type"
|
|
1315
|
+
]
|
|
1316
|
+
}
|
|
1317
|
+
}
|
|
1318
|
+
},
|
|
1319
|
+
{
|
|
1320
|
+
"displayName": "Exclude Automatic Assertions",
|
|
1321
|
+
"name": "exclude_automatic_assertions",
|
|
1322
|
+
"description": "If true, excludes associations that involve IEAs (ECO:0000501)",
|
|
1323
|
+
"default": false,
|
|
1324
|
+
"type": "boolean",
|
|
1325
|
+
"routing": {
|
|
1326
|
+
"send": {
|
|
1327
|
+
"type": "query",
|
|
1328
|
+
"property": "exclude_automatic_assertions",
|
|
1329
|
+
"value": "={{ $value }}",
|
|
1330
|
+
"propertyInDotNotation": false
|
|
1331
|
+
}
|
|
1332
|
+
},
|
|
1333
|
+
"displayOptions": {
|
|
1334
|
+
"show": {
|
|
1335
|
+
"resource": [
|
|
1336
|
+
"Association"
|
|
1337
|
+
],
|
|
1338
|
+
"operation": [
|
|
1339
|
+
"Get Association By Subject And Assoc Type"
|
|
1340
|
+
]
|
|
1341
|
+
}
|
|
1342
|
+
}
|
|
1343
|
+
},
|
|
1344
|
+
{
|
|
1345
|
+
"displayName": "Use Compact Associations",
|
|
1346
|
+
"name": "use_compact_associations",
|
|
1347
|
+
"description": "If true, returns results in compact associations format",
|
|
1348
|
+
"default": false,
|
|
1349
|
+
"type": "boolean",
|
|
1350
|
+
"routing": {
|
|
1351
|
+
"send": {
|
|
1352
|
+
"type": "query",
|
|
1353
|
+
"property": "use_compact_associations",
|
|
1354
|
+
"value": "={{ $value }}",
|
|
1355
|
+
"propertyInDotNotation": false
|
|
1356
|
+
}
|
|
1357
|
+
},
|
|
1358
|
+
"displayOptions": {
|
|
1359
|
+
"show": {
|
|
1360
|
+
"resource": [
|
|
1361
|
+
"Association"
|
|
1362
|
+
],
|
|
1363
|
+
"operation": [
|
|
1364
|
+
"Get Association By Subject And Assoc Type"
|
|
1365
|
+
]
|
|
1366
|
+
}
|
|
1367
|
+
}
|
|
1368
|
+
},
|
|
1369
|
+
{
|
|
1370
|
+
"displayName": "Subject",
|
|
1371
|
+
"name": "subject",
|
|
1372
|
+
"description": "Subject CURIE",
|
|
1373
|
+
"default": "",
|
|
1374
|
+
"type": "string",
|
|
1375
|
+
"routing": {
|
|
1376
|
+
"send": {
|
|
1377
|
+
"type": "query",
|
|
1378
|
+
"property": "subject",
|
|
1379
|
+
"value": "={{ $value }}",
|
|
1380
|
+
"propertyInDotNotation": false
|
|
1381
|
+
}
|
|
1382
|
+
},
|
|
1383
|
+
"displayOptions": {
|
|
1384
|
+
"show": {
|
|
1385
|
+
"resource": [
|
|
1386
|
+
"Association"
|
|
1387
|
+
],
|
|
1388
|
+
"operation": [
|
|
1389
|
+
"Get Association By Subject And Assoc Type"
|
|
1390
|
+
]
|
|
1391
|
+
}
|
|
1392
|
+
}
|
|
1393
|
+
},
|
|
1394
|
+
{
|
|
1395
|
+
"displayName": "Object",
|
|
1396
|
+
"name": "object",
|
|
1397
|
+
"description": "Object CURIE",
|
|
1398
|
+
"default": "",
|
|
1399
|
+
"type": "string",
|
|
1400
|
+
"routing": {
|
|
1401
|
+
"send": {
|
|
1402
|
+
"type": "query",
|
|
1403
|
+
"property": "object",
|
|
1404
|
+
"value": "={{ $value }}",
|
|
1405
|
+
"propertyInDotNotation": false
|
|
1406
|
+
}
|
|
1407
|
+
},
|
|
1408
|
+
"displayOptions": {
|
|
1409
|
+
"show": {
|
|
1410
|
+
"resource": [
|
|
1411
|
+
"Association"
|
|
1412
|
+
],
|
|
1413
|
+
"operation": [
|
|
1414
|
+
"Get Association By Subject And Assoc Type"
|
|
1415
|
+
]
|
|
1416
|
+
}
|
|
1417
|
+
}
|
|
1418
|
+
},
|
|
1419
|
+
{
|
|
1420
|
+
"displayName": "GET /association/{id}",
|
|
1421
|
+
"name": "operation",
|
|
1422
|
+
"type": "notice",
|
|
1423
|
+
"typeOptions": {
|
|
1424
|
+
"theme": "info"
|
|
1425
|
+
},
|
|
1426
|
+
"default": "",
|
|
1427
|
+
"displayOptions": {
|
|
1428
|
+
"show": {
|
|
1429
|
+
"resource": [
|
|
1430
|
+
"Association"
|
|
1431
|
+
],
|
|
1432
|
+
"operation": [
|
|
1433
|
+
"Get Association Object"
|
|
1434
|
+
]
|
|
1435
|
+
}
|
|
1436
|
+
}
|
|
1437
|
+
},
|
|
1438
|
+
];
|
|
1439
|
+
//# sourceMappingURL=index.js.map
|