@n8n-dev/n8n-nodes-monarchinitiative 1.0.0

package/dist/nodes/Monarchinitiative/Monarchinitiative.node.js

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+"use strict";
+Object.defineProperty(exports, "__esModule", { value: true });
+exports.Monarchinitiative = void 0;
+const n8n_workflow_1 = require("n8n-workflow");
+const bioentity_1 = require("./resources/bioentity");
+const association_1 = require("./resources/association");
+const cam_1 = require("./resources/cam");
+const bioentityset_1 = require("./resources/bioentityset");
+const bioentityset_homologs_1 = require("./resources/bioentityset-homologs");
+const bioentityset_slimmer_1 = require("./resources/bioentityset-slimmer");
+const evidence_graph_1 = require("./resources/evidence-graph");
+const genome_features_1 = require("./resources/genome-features");
+const graph_1 = require("./resources/graph");
+const identifier_mapper_1 = require("./resources/identifier-mapper");
+const identifier_prefixes_1 = require("./resources/identifier-prefixes");
+const mart_1 = require("./resources/mart");
+const nlp_annotate_1 = require("./resources/nlp-annotate");
+const ontol_1 = require("./resources/ontol");
+const ontol_labeler_1 = require("./resources/ontol-labeler");
+const ontol_identifier_1 = require("./resources/ontol-identifier");
+const ontology_1 = require("./resources/ontology");
+const owl_ontology_1 = require("./resources/owl-ontology");
+const pair_sim_1 = require("./resources/pair-sim");
+const individual_1 = require("./resources/individual");
+const relation_usage_1 = require("./resources/relation-usage");
+const search_1 = require("./resources/search");
+const variation_set_1 = require("./resources/variation-set");
+const sim_1 = require("./resources/sim");
+const mme_1 = require("./resources/mme");
+const metadata_1 = require("./resources/metadata");
+class Monarchinitiative {
+    constructor() {
+        this.description = {
+            displayName: 'monarchinitiative',
+            name: 'N8nDevMonarchinitiative',
+            icon: { light: 'file:./monarchinitiative.svg', dark: 'file:./monarchinitiative.dark.svg' },
+            group: ['input'],
+            version: 1,
+            subtitle: '={{\$parameter["operation"] + ": " + \$parameter["resource"]}}',
+            description: 'API integration layer for linked biological objects',
+            defaults: { name: 'monarchinitiative' },
+            usableAsTool: true,
+            inputs: [n8n_workflow_1.NodeConnectionTypes.Main],
+            outputs: [n8n_workflow_1.NodeConnectionTypes.Main],
+            credentials: [
+                {
+                    name: 'N8nDevMonarchinitiativeApi',
+                    required: true,
+                },
+            ],
+            requestDefaults: {
+                baseURL: '={{\$credentials.url}}',
+                headers: {
+                    Accept: 'application/json',
+                    'Content-Type': 'application/json',
+                },
+            },
+            properties: [
+                {
+                    "displayName": "Resource",
+                    "name": "resource",
+                    "type": "options",
+                    "noDataExpression": true,
+                    "options": [
+                        {
+                            "name": "Bioentity",
+                            "value": "Bioentity",
+                            "description": "Retrieval of domain entities plus associations"
+                        },
+                        {
+                            "name": "Association",
+                            "value": "Association",
+                            "description": "Retrieve associations between entities or entity and descriptors"
+                        },
+                        {
+                            "name": "Cam",
+                            "value": "Cam",
+                            "description": "Operations on GO Causal Activity Models (GO-CAMs)"
+                        },
+                        {
+                            "name": "Bioentityset",
+                            "value": "Bioentityset",
+                            "description": "Operations over sets of entities"
+                        },
+                        {
+                            "name": "Bioentityset Homologs",
+                            "value": "Bioentityset Homologs",
+                            "description": "Map gene IDs to their homologs"
+                        },
+                        {
+                            "name": "Bioentityset Slimmer",
+                            "value": "Bioentityset Slimmer",
+                            "description": "maps a set of entities to a slim"
+                        },
+                        {
+                            "name": "Evidence Graph",
+                            "value": "Evidence Graph",
+                            "description": "Operations on evidence graphs"
+                        },
+                        {
+                            "name": "Genome Features",
+                            "value": "Genome Features",
+                            "description": "Operations to retrieve sequence features"
+                        },
+                        {
+                            "name": "Graph",
+                            "value": "Graph",
+                            "description": "Operations over data graphs"
+                        },
+                        {
+                            "name": "Identifier Mapper",
+                            "value": "Identifier Mapper",
+                            "description": "mapping and resolution of identifiers"
+                        },
+                        {
+                            "name": "Identifier Prefixes",
+                            "value": "Identifier Prefixes",
+                            "description": "identifier prefixes"
+                        },
+                        {
+                            "name": "Mart",
+                            "value": "Mart",
+                            "description": "Perform bulk operations"
+                        },
+                        {
+                            "name": "Nlp Annotate",
+                            "value": "Nlp Annotate",
+                            "description": "annotate text using named entities"
+                        },
+                        {
+                            "name": "Ontol",
+                            "value": "Ontol",
+                            "description": "extract a subgraph from an ontology"
+                        },
+                        {
+                            "name": "Ontol Labeler",
+                            "value": "Ontol Labeler",
+                            "description": "Assign labels to IDs"
+                        },
+                        {
+                            "name": "Ontol Identifier",
+                            "value": "Ontol Identifier",
+                            "description": "Retrieve IDs for labels"
+                        },
+                        {
+                            "name": "Ontology",
+                            "value": "Ontology",
+                            "description": "Operations on Ontology Terms and Subsets"
+                        },
+                        {
+                            "name": "Owl Ontology",
+                            "value": "Owl Ontology",
+                            "description": "OWL-level operations on an ontology"
+                        },
+                        {
+                            "name": "Pair Sim",
+                            "value": "Pair Sim",
+                            "description": "pairwise similarity between two entities"
+                        },
+                        {
+                            "name": "Individual",
+                            "value": "Individual",
+                            "description": "Individual humans (including patients), or organisms"
+                        },
+                        {
+                            "name": "Relation Usage",
+                            "value": "Relation Usage",
+                            "description": "Usage of different relationship types"
+                        },
+                        {
+                            "name": "Search",
+                            "value": "Search",
+                            "description": "Search for entities"
+                        },
+                        {
+                            "name": "Variation Set",
+                            "value": "Variation Set",
+                            "description": "Operations related to sets of variants"
+                        },
+                        {
+                            "name": "Sim",
+                            "value": "Sim",
+                            "description": "Perform semantic similarity, ranking, and sufficiency scoring"
+                        },
+                        {
+                            "name": "Mme",
+                            "value": "Mme",
+                            "description": "Match patients with similar diseases and non-human genes based on their phenotypes"
+                        },
+                        {
+                            "name": "Metadata",
+                            "value": "Metadata",
+                            "description": "Get metadata"
+                        }
+                    ],
+                    "default": ""
+                },
+                ...bioentity_1.bioentityDescription,
+                ...association_1.associationDescription,
+                ...cam_1.camDescription,
+                ...bioentityset_1.bioentitysetDescription,
+                ...bioentityset_homologs_1.bioentitysetHomologsDescription,
+                ...bioentityset_slimmer_1.bioentitysetSlimmerDescription,
+                ...evidence_graph_1.evidenceGraphDescription,
+                ...genome_features_1.genomeFeaturesDescription,
+                ...graph_1.graphDescription,
+                ...identifier_mapper_1.identifierMapperDescription,
+                ...identifier_prefixes_1.identifierPrefixesDescription,
+                ...mart_1.martDescription,
+                ...nlp_annotate_1.nlpAnnotateDescription,
+                ...ontol_1.ontolDescription,
+                ...ontol_labeler_1.ontolLabelerDescription,
+                ...ontol_identifier_1.ontolIdentifierDescription,
+                ...ontology_1.ontologyDescription,
+                ...owl_ontology_1.owlOntologyDescription,
+                ...pair_sim_1.pairSimDescription,
+                ...individual_1.individualDescription,
+                ...relation_usage_1.relationUsageDescription,
+                ...search_1.searchDescription,
+                ...variation_set_1.variationSetDescription,
+                ...sim_1.simDescription,
+                ...mme_1.mmeDescription,
+                ...metadata_1.metadataDescription
+            ],
+        };
+    }
+}
+exports.Monarchinitiative = Monarchinitiative;
+//# sourceMappingURL=Monarchinitiative.node.js.map

package/dist/nodes/Monarchinitiative/Monarchinitiative.node.js.map

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package/dist/nodes/Monarchinitiative/Monarchinitiative.node.json

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+{
+    "node": "N8nDevMonarchinitiative",
+    "nodeVersion": "1.0",
+    "codexVersion": "1.0",
+    "categories": [
+        "Development"
+    ],
+    "resources": {
+        "primaryDocumentation": [
+            {
+                "url": "https://github.com/n8n-code/n8n-nodes-monarchinitiative"
+            }
+        ],
+        "credentialDocumentation": [
+            {
+                "url": "https://github.com/n8n-code/n8n-nodes-monarchinitiative?tab=readme-ov-file#credentials"
+            }
+        ]
+    }
+}

package/dist/nodes/Monarchinitiative/monarchinitiative.dark.svg

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+</svg>

package/dist/nodes/Monarchinitiative/monarchinitiative.svg

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+</svg>

package/dist/nodes/Monarchinitiative/resources/association/index.d.ts

@@ -0,0 +1,2 @@
+import type { INodeProperties } from 'n8n-workflow';
+export declare const associationDescription: INodeProperties[];