npm - @n8n-dev/n8n-nodes-monarchinitiative - Versions diffs - 1.0.0 - Mend

@n8n-dev/n8n-nodes-monarchinitiative 1.0.0

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package/dist/nodes/Monarchinitiative/resources/nlp-annotate/index.js.map ADDED Viewed

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package/dist/nodes/Monarchinitiative/resources/ontol/index.d.ts ADDED Viewed

	@@ -0,0 +1,2 @@
1	+ import type { INodeProperties } from 'n8n-workflow';
2	+ export declare const ontolDescription: INodeProperties[];

package/dist/nodes/Monarchinitiative/resources/ontol/index.js ADDED Viewed

@@ -0,0 +1,390 @@
+"use strict";
+Object.defineProperty(exports, "__esModule", { value: true });
+exports.ontolDescription = void 0;
+exports.ontolDescription = [
+    {
+        "displayName": "Operation",
+        "name": "operation",
+        "type": "options",
+        "noDataExpression": true,
+        "displayOptions": {
+            "show": {
+                "resource": [
+                    "Ontol"
+                ]
+            }
+        },
+        "options": [
+            {
+                "name": "Get Information Content Resource",
+                "value": "Get Information Content Resource",
+                "action": "Returns information content (IC) for a set of relevant ontology classes",
+                "description": "```\nIC = -log2( freq(t) / popSize )\n```\n\nHere the frequency and population is calculated for a particular dataset:\ne.g. all human disease-phenotype associations",
+                "routing": {
+                    "request": {
+                        "method": "GET",
+                        "url": "=/ontol/information_content/{{$parameter[\"subject_category\"]}}/{{$parameter[\"object_category\"]}}/{{$parameter[\"subject_taxon\"]}}"
+                    }
+                }
+            },
+            {
+                "name": "Get Extract Ontology Subgraph Resource",
+                "value": "Get Extract Ontology Subgraph Resource",
+                "action": "Extract a subgraph from an ontology",
+                "description": "Extract a subgraph from an ontology",
+                "routing": {
+                    "request": {
+                        "method": "GET",
+                        "url": "=/ontol/subgraph/{{$parameter[\"ontology\"]}}/{{$parameter[\"node\"]}}"
+                    }
+                }
+            },
+            {
+                "name": "Post Extract Ontology Subgraph Resource",
+                "value": "Post Extract Ontology Subgraph Resource",
+                "action": "Extract a subgraph from an ontology",
+                "description": "Extract a subgraph from an ontology",
+                "routing": {
+                    "request": {
+                        "method": "POST",
+                        "url": "=/ontol/subgraph/{{$parameter[\"ontology\"]}}/{{$parameter[\"node\"]}}"
+                    }
+                }
+            }
+        ],
+        "default": ""
+    },
+    {
+        "displayName": "GET /ontol/information_content/{subject_category}/{object_category}/{subject_taxon}",
+        "name": "operation",
+        "type": "notice",
+        "typeOptions": {
+            "theme": "info"
+        },
+        "default": "",
+        "displayOptions": {
+            "show": {
+                "resource": [
+                    "Ontol"
+                ],
+                "operation": [
+                    "Get Information Content Resource"
+                ]
+            }
+        }
+    },
+    {
+        "displayName": "Evidence",
+        "name": "evidence",
+        "description": "Object id, e.g. ECO:0000501 (for IEA; Includes inferred by default)\n                    or a specific publication or other supporting ibject, e.g. ZFIN:ZDB-PUB-060503-2.\n                    ",
+        "default": "",
+        "type": "string",
+        "routing": {
+            "send": {
+                "type": "query",
+                "property": "evidence",
+                "value": "={{ $value }}",
+                "propertyInDotNotation": false
+            }
+        },
+        "displayOptions": {
+            "show": {
+                "resource": [
+                    "Ontol"
+                ],
+                "operation": [
+                    "Get Information Content Resource"
+                ]
+            }
+        }
+    },
+    {
+        "displayName": "GET /ontol/subgraph/{ontology}/{node}",
+        "name": "operation",
+        "type": "notice",
+        "typeOptions": {
+            "theme": "info"
+        },
+        "default": "",
+        "displayOptions": {
+            "show": {
+                "resource": [
+                    "Ontol"
+                ],
+                "operation": [
+                    "Get Extract Ontology Subgraph Resource"
+                ]
+            }
+        }
+    },
+    {
+        "displayName": "Cnode",
+        "name": "cnode",
+        "description": "Additional classes",
+        "default": "[\n  null\n]",
+        "type": "json",
+        "routing": {
+            "send": {
+                "type": "query",
+                "property": "cnode",
+                "value": "={{ $value }}",
+                "propertyInDotNotation": false
+            }
+        },
+        "displayOptions": {
+            "show": {
+                "resource": [
+                    "Ontol"
+                ],
+                "operation": [
+                    "Get Extract Ontology Subgraph Resource"
+                ]
+            }
+        }
+    },
+    {
+        "displayName": "Include Ancestors",
+        "name": "include_ancestors",
+        "description": "Include Ancestors",
+        "default": true,
+        "type": "boolean",
+        "routing": {
+            "send": {
+                "type": "query",
+                "property": "include_ancestors",
+                "value": "={{ $value }}",
+                "propertyInDotNotation": false
+            }
+        },
+        "displayOptions": {
+            "show": {
+                "resource": [
+                    "Ontol"
+                ],
+                "operation": [
+                    "Get Extract Ontology Subgraph Resource"
+                ]
+            }
+        }
+    },
+    {
+        "displayName": "Include Descendants",
+        "name": "include_descendants",
+        "description": "Include Descendants",
+        "default": true,
+        "type": "boolean",
+        "routing": {
+            "send": {
+                "type": "query",
+                "property": "include_descendants",
+                "value": "={{ $value }}",
+                "propertyInDotNotation": false
+            }
+        },
+        "displayOptions": {
+            "show": {
+                "resource": [
+                    "Ontol"
+                ],
+                "operation": [
+                    "Get Extract Ontology Subgraph Resource"
+                ]
+            }
+        }
+    },
+    {
+        "displayName": "Relation",
+        "name": "relation",
+        "description": "Additional classes",
+        "default": "[\n  \"subClassOf\",\n  \"BFO:0000050\"\n]",
+        "type": "json",
+        "routing": {
+            "send": {
+                "type": "query",
+                "property": "relation",
+                "value": "={{ $value }}",
+                "propertyInDotNotation": false
+            }
+        },
+        "displayOptions": {
+            "show": {
+                "resource": [
+                    "Ontol"
+                ],
+                "operation": [
+                    "Get Extract Ontology Subgraph Resource"
+                ]
+            }
+        }
+    },
+    {
+        "displayName": "Include Meta",
+        "name": "include_meta",
+        "description": "Include metadata in response",
+        "default": false,
+        "type": "boolean",
+        "routing": {
+            "send": {
+                "type": "query",
+                "property": "include_meta",
+                "value": "={{ $value }}",
+                "propertyInDotNotation": false
+            }
+        },
+        "displayOptions": {
+            "show": {
+                "resource": [
+                    "Ontol"
+                ],
+                "operation": [
+                    "Get Extract Ontology Subgraph Resource"
+                ]
+            }
+        }
+    },
+    {
+        "displayName": "POST /ontol/subgraph/{ontology}/{node}",
+        "name": "operation",
+        "type": "notice",
+        "typeOptions": {
+            "theme": "info"
+        },
+        "default": "",
+        "displayOptions": {
+            "show": {
+                "resource": [
+                    "Ontol"
+                ],
+                "operation": [
+                    "Post Extract Ontology Subgraph Resource"
+                ]
+            }
+        }
+    },
+    {
+        "displayName": "Cnode",
+        "name": "cnode",
+        "description": "Additional classes",
+        "default": "[\n  null\n]",
+        "type": "json",
+        "routing": {
+            "send": {
+                "type": "query",
+                "property": "cnode",
+                "value": "={{ $value }}",
+                "propertyInDotNotation": false
+            }
+        },
+        "displayOptions": {
+            "show": {
+                "resource": [
+                    "Ontol"
+                ],
+                "operation": [
+                    "Post Extract Ontology Subgraph Resource"
+                ]
+            }
+        }
+    },
+    {
+        "displayName": "Include Ancestors",
+        "name": "include_ancestors",
+        "description": "Include Ancestors",
+        "default": true,
+        "type": "boolean",
+        "routing": {
+            "send": {
+                "type": "query",
+                "property": "include_ancestors",
+                "value": "={{ $value }}",
+                "propertyInDotNotation": false
+            }
+        },
+        "displayOptions": {
+            "show": {
+                "resource": [
+                    "Ontol"
+                ],
+                "operation": [
+                    "Post Extract Ontology Subgraph Resource"
+                ]
+            }
+        }
+    },
+    {
+        "displayName": "Include Descendants",
+        "name": "include_descendants",
+        "description": "Include Descendants",
+        "default": true,
+        "type": "boolean",
+        "routing": {
+            "send": {
+                "type": "query",
+                "property": "include_descendants",
+                "value": "={{ $value }}",
+                "propertyInDotNotation": false
+            }
+        },
+        "displayOptions": {
+            "show": {
+                "resource": [
+                    "Ontol"
+                ],
+                "operation": [
+                    "Post Extract Ontology Subgraph Resource"
+                ]
+            }
+        }
+    },
+    {
+        "displayName": "Relation",
+        "name": "relation",
+        "description": "Additional classes",
+        "default": "[\n  \"subClassOf\",\n  \"BFO:0000050\"\n]",
+        "type": "json",
+        "routing": {
+            "send": {
+                "type": "query",
+                "property": "relation",
+                "value": "={{ $value }}",
+                "propertyInDotNotation": false
+            }
+        },
+        "displayOptions": {
+            "show": {
+                "resource": [
+                    "Ontol"
+                ],
+                "operation": [
+                    "Post Extract Ontology Subgraph Resource"
+                ]
+            }
+        }
+    },
+    {
+        "displayName": "Include Meta",
+        "name": "include_meta",
+        "description": "Include metadata in response",
+        "default": false,
+        "type": "boolean",
+        "routing": {
+            "send": {
+                "type": "query",
+                "property": "include_meta",
+                "value": "={{ $value }}",
+                "propertyInDotNotation": false
+            }
+        },
+        "displayOptions": {
+            "show": {
+                "resource": [
+                    "Ontol"
+                ],
+                "operation": [
+                    "Post Extract Ontology Subgraph Resource"
+                ]
+            }
+        }
+    },
+];
+//# sourceMappingURL=index.js.map

package/dist/nodes/Monarchinitiative/resources/ontol/index.js.map ADDED Viewed

@@ -0,0 +1 @@

+ 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package/dist/nodes/Monarchinitiative/resources/ontol-identifier/index.d.ts ADDED Viewed

	@@ -0,0 +1,2 @@
1	+ import type { INodeProperties } from 'n8n-workflow';
2	+ export declare const ontolIdentifierDescription: INodeProperties[];

package/dist/nodes/Monarchinitiative/resources/ontol-identifier/index.js ADDED Viewed

@@ -0,0 +1,136 @@
+"use strict";
+Object.defineProperty(exports, "__esModule", { value: true });
+exports.ontolIdentifierDescription = void 0;
+exports.ontolIdentifierDescription = [
+    {
+        "displayName": "Operation",
+        "name": "operation",
+        "type": "options",
+        "noDataExpression": true,
+        "displayOptions": {
+            "show": {
+                "resource": [
+                    "Ontol Identifier"
+                ]
+            }
+        },
+        "options": [
+            {
+                "name": "Get Ontol Identifier Resource",
+                "value": "Get Ontol Identifier Resource",
+                "action": "Fetches a map from CURIEs/IDs to labels",
+                "description": "Fetches a map from CURIEs/IDs to labels",
+                "routing": {
+                    "request": {
+                        "method": "GET",
+                        "url": "=/ontol/identifier/"
+                    }
+                }
+            },
+            {
+                "name": "Post Ontol Identifier Resource",
+                "value": "Post Ontol Identifier Resource",
+                "action": "Fetches a map from CURIEs/IDs to labels",
+                "description": "Takes 'label' list argument either as a querystring argument or as a key\nin the POST body when content-type is application/json.",
+                "routing": {
+                    "request": {
+                        "method": "POST",
+                        "url": "=/ontol/identifier/"
+                    }
+                }
+            }
+        ],
+        "default": ""
+    },
+    {
+        "displayName": "GET /ontol/identifier/",
+        "name": "operation",
+        "type": "notice",
+        "typeOptions": {
+            "theme": "info"
+        },
+        "default": "",
+        "displayOptions": {
+            "show": {
+                "resource": [
+                    "Ontol Identifier"
+                ],
+                "operation": [
+                    "Get Ontol Identifier Resource"
+                ]
+            }
+        }
+    },
+    {
+        "displayName": "Label",
+        "name": "label",
+        "required": true,
+        "description": "List of labels",
+        "default": "[\n  null\n]",
+        "type": "json",
+        "routing": {
+            "send": {
+                "type": "query",
+                "property": "label",
+                "value": "={{ $value }}",
+                "propertyInDotNotation": false
+            }
+        },
+        "displayOptions": {
+            "show": {
+                "resource": [
+                    "Ontol Identifier"
+                ],
+                "operation": [
+                    "Get Ontol Identifier Resource"
+                ]
+            }
+        }
+    },
+    {
+        "displayName": "POST /ontol/identifier/",
+        "name": "operation",
+        "type": "notice",
+        "typeOptions": {
+            "theme": "info"
+        },
+        "default": "",
+        "displayOptions": {
+            "show": {
+                "resource": [
+                    "Ontol Identifier"
+                ],
+                "operation": [
+                    "Post Ontol Identifier Resource"
+                ]
+            }
+        }
+    },
+    {
+        "displayName": "Label",
+        "name": "label",
+        "required": true,
+        "description": "List of labels",
+        "default": "[\n  null\n]",
+        "type": "json",
+        "routing": {
+            "send": {
+                "type": "query",
+                "property": "label",
+                "value": "={{ $value }}",
+                "propertyInDotNotation": false
+            }
+        },
+        "displayOptions": {
+            "show": {
+                "resource": [
+                    "Ontol Identifier"
+                ],
+                "operation": [
+                    "Post Ontol Identifier Resource"
+                ]
+            }
+        }
+    },
+];
+//# sourceMappingURL=index.js.map

package/dist/nodes/Monarchinitiative/resources/ontol-identifier/index.js.map ADDED Viewed

@@ -0,0 +1 @@

+ {"version":3,"file":"index.js","sourceRoot":"","sources":["../../../../../nodes/Monarchinitiative/resources/ontol-identifier/index.ts"],"names":[],"mappings":";;;AAEa,QAAA,0BAA0B,GAAsB;IAC3D;QACC,aAAa,EAAE,WAAW;QAC1B,MAAM,EAAE,WAAW;QACnB,MAAM,EAAE,SAAS;QACjB,kBAAkB,EAAE,IAAI;QACxB,gBAAgB,EAAE;YACjB,MAAM,EAAE;gBACP,UAAU,EAAE;oBACX,kBAAkB;iBAClB;aACD;SACD;QACD,SAAS,EAAE;YACV;gBACC,MAAM,EAAE,+BAA+B;gBACvC,OAAO,EAAE,+BAA+B;gBACxC,QAAQ,EAAE,yCAAyC;gBACnD,aAAa,EAAE,yCAAyC;gBACxD,SAAS,EAAE;oBACV,SAAS,EAAE;wBACV,QAAQ,EAAE,KAAK;wBACf,KAAK,EAAE,qBAAqB;qBAC5B;iBACD;aACD;YACD;gBACC,MAAM,EAAE,gCAAgC;gBACxC,OAAO,EAAE,gCAAgC;gBACzC,QAAQ,EAAE,yCAAyC;gBACnD,aAAa,EAAE,mIAAmI;gBAClJ,SAAS,EAAE;oBACV,SAAS,EAAE;wBACV,QAAQ,EAAE,MAAM;wBAChB,KAAK,EAAE,qBAAqB;qBAC5B;iBACD;aACD;SACD;QACD,SAAS,EAAE,EAAE;KACb;IACD;QACC,aAAa,EAAE,wBAAwB;QACvC,MAAM,EAAE,WAAW;QACnB,MAAM,EAAE,QAAQ;QAChB,aAAa,EAAE;YACd,OAAO,EAAE,MAAM;SACf;QACD,SAAS,EAAE,EAAE;QACb,gBAAgB,EAAE;YACjB,MAAM,EAAE;gBACP,UAAU,EAAE;oBACX,kBAAkB;iBAClB;gBACD,WAAW,EAAE;oBACZ,+BAA+B;iBAC/B;aACD;SACD;KACD;IACD;QACC,aAAa,EAAE,OAAO;QACtB,MAAM,EAAE,OAAO;QACf,UAAU,EAAE,IAAI;QAChB,aAAa,EAAE,gBAAgB;QAC/B,SAAS,EAAE,cAAc;QACzB,MAAM,EAAE,MAAM;QACd,SAAS,EAAE;YACV,MAAM,EAAE;gBACP,MAAM,EAAE,OAAO;gBACf,UAAU,EAAE,OAAO;gBACnB,OAAO,EAAE,eAAe;gBACxB,uBAAuB,EAAE,KAAK;aAC9B;SACD;QACD,gBAAgB,EAAE;YACjB,MAAM,EAAE;gBACP,UAAU,EAAE;oBACX,kBAAkB;iBAClB;gBACD,WAAW,EAAE;oBACZ,+BAA+B;iBAC/B;aACD;SACD;KACD;IACD;QACC,aAAa,EAAE,yBAAyB;QACxC,MAAM,EAAE,WAAW;QACnB,MAAM,EAAE,QAAQ;QAChB,aAAa,EAAE;YACd,OAAO,EAAE,MAAM;SACf;QACD,SAAS,EAAE,EAAE;QACb,gBAAgB,EAAE;YACjB,MAAM,EAAE;gBACP,UAAU,EAAE;oBACX,kBAAkB;iBAClB;gBACD,WAAW,EAAE;oBACZ,gCAAgC;iBAChC;aACD;SACD;KACD;IACD;QACC,aAAa,EAAE,OAAO;QACtB,MAAM,EAAE,OAAO;QACf,UAAU,EAAE,IAAI;QAChB,aAAa,EAAE,gBAAgB;QAC/B,SAAS,EAAE,cAAc;QACzB,MAAM,EAAE,MAAM;QACd,SAAS,EAAE;YACV,MAAM,EAAE;gBACP,MAAM,EAAE,OAAO;gBACf,UAAU,EAAE,OAAO;gBACnB,OAAO,EAAE,eAAe;gBACxB,uBAAuB,EAAE,KAAK;aAC9B;SACD;QACD,gBAAgB,EAAE;YACjB,MAAM,EAAE;gBACP,UAAU,EAAE;oBACX,kBAAkB;iBAClB;gBACD,WAAW,EAAE;oBACZ,gCAAgC;iBAChC;aACD;SACD;KACD;CACF,CAAC"}

package/dist/nodes/Monarchinitiative/resources/ontol-labeler/index.d.ts ADDED Viewed

	@@ -0,0 +1,2 @@
1	+ import type { INodeProperties } from 'n8n-workflow';
2	+ export declare const ontolLabelerDescription: INodeProperties[];

package/dist/nodes/Monarchinitiative/resources/ontol-labeler/index.js ADDED Viewed

@@ -0,0 +1,79 @@
+"use strict";
+Object.defineProperty(exports, "__esModule", { value: true });
+exports.ontolLabelerDescription = void 0;
+exports.ontolLabelerDescription = [
+    {
+        "displayName": "Operation",
+        "name": "operation",
+        "type": "options",
+        "noDataExpression": true,
+        "displayOptions": {
+            "show": {
+                "resource": [
+                    "Ontol Labeler"
+                ]
+            }
+        },
+        "options": [
+            {
+                "name": "Get Ontol Labeler Resource",
+                "value": "Get Ontol Labeler Resource",
+                "action": "Fetches a map from CURIEs/IDs to labels",
+                "description": "Fetches a map from CURIEs/IDs to labels",
+                "routing": {
+                    "request": {
+                        "method": "GET",
+                        "url": "=/ontol/labeler/"
+                    }
+                }
+            }
+        ],
+        "default": ""
+    },
+    {
+        "displayName": "GET /ontol/labeler/",
+        "name": "operation",
+        "type": "notice",
+        "typeOptions": {
+            "theme": "info"
+        },
+        "default": "",
+        "displayOptions": {
+            "show": {
+                "resource": [
+                    "Ontol Labeler"
+                ],
+                "operation": [
+                    "Get Ontol Labeler Resource"
+                ]
+            }
+        }
+    },
+    {
+        "displayName": "Id",
+        "name": "id",
+        "required": true,
+        "description": "List of ids",
+        "default": "[\n  null\n]",
+        "type": "json",
+        "routing": {
+            "send": {
+                "type": "query",
+                "property": "id",
+                "value": "={{ $value }}",
+                "propertyInDotNotation": false
+            }
+        },
+        "displayOptions": {
+            "show": {
+                "resource": [
+                    "Ontol Labeler"
+                ],
+                "operation": [
+                    "Get Ontol Labeler Resource"
+                ]
+            }
+        }
+    },
+];
+//# sourceMappingURL=index.js.map

package/dist/nodes/Monarchinitiative/resources/ontol-labeler/index.js.map ADDED Viewed

@@ -0,0 +1 @@

+ {"version":3,"file":"index.js","sourceRoot":"","sources":["../../../../../nodes/Monarchinitiative/resources/ontol-labeler/index.ts"],"names":[],"mappings":";;;AAEa,QAAA,uBAAuB,GAAsB;IACxD;QACC,aAAa,EAAE,WAAW;QAC1B,MAAM,EAAE,WAAW;QACnB,MAAM,EAAE,SAAS;QACjB,kBAAkB,EAAE,IAAI;QACxB,gBAAgB,EAAE;YACjB,MAAM,EAAE;gBACP,UAAU,EAAE;oBACX,eAAe;iBACf;aACD;SACD;QACD,SAAS,EAAE;YACV;gBACC,MAAM,EAAE,4BAA4B;gBACpC,OAAO,EAAE,4BAA4B;gBACrC,QAAQ,EAAE,yCAAyC;gBACnD,aAAa,EAAE,yCAAyC;gBACxD,SAAS,EAAE;oBACV,SAAS,EAAE;wBACV,QAAQ,EAAE,KAAK;wBACf,KAAK,EAAE,kBAAkB;qBACzB;iBACD;aACD;SACD;QACD,SAAS,EAAE,EAAE;KACb;IACD;QACC,aAAa,EAAE,qBAAqB;QACpC,MAAM,EAAE,WAAW;QACnB,MAAM,EAAE,QAAQ;QAChB,aAAa,EAAE;YACd,OAAO,EAAE,MAAM;SACf;QACD,SAAS,EAAE,EAAE;QACb,gBAAgB,EAAE;YACjB,MAAM,EAAE;gBACP,UAAU,EAAE;oBACX,eAAe;iBACf;gBACD,WAAW,EAAE;oBACZ,4BAA4B;iBAC5B;aACD;SACD;KACD;IACD;QACC,aAAa,EAAE,IAAI;QACnB,MAAM,EAAE,IAAI;QACZ,UAAU,EAAE,IAAI;QAChB,aAAa,EAAE,aAAa;QAC5B,SAAS,EAAE,cAAc;QACzB,MAAM,EAAE,MAAM;QACd,SAAS,EAAE;YACV,MAAM,EAAE;gBACP,MAAM,EAAE,OAAO;gBACf,UAAU,EAAE,IAAI;gBAChB,OAAO,EAAE,eAAe;gBACxB,uBAAuB,EAAE,KAAK;aAC9B;SACD;QACD,gBAAgB,EAAE;YACjB,MAAM,EAAE;gBACP,UAAU,EAAE;oBACX,eAAe;iBACf;gBACD,WAAW,EAAE;oBACZ,4BAA4B;iBAC5B;aACD;SACD;KACD;CACF,CAAC"}

package/dist/nodes/Monarchinitiative/resources/ontology/index.d.ts ADDED Viewed

	@@ -0,0 +1,2 @@
1	+ import type { INodeProperties } from 'n8n-workflow';
2	+ export declare const ontologyDescription: INodeProperties[];