@mindrian_os/install 1.13.0-beta.11

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (597) hide show
  1. package/.claude-plugin/plugin.json +21 -0
  2. package/.mcp.json +9 -0
  3. package/CHANGELOG.md +3333 -0
  4. package/LICENSE +123 -0
  5. package/README.md +673 -0
  6. package/agents/brain-query.md +80 -0
  7. package/agents/framework-runner.md +237 -0
  8. package/agents/grading.md +188 -0
  9. package/agents/investor.md +128 -0
  10. package/agents/larry-extended.md +135 -0
  11. package/agents/opportunity-scanner.md +91 -0
  12. package/agents/persona-analyst.md +132 -0
  13. package/agents/research.md +89 -0
  14. package/agents/reverse-salient-agent.md +27 -0
  15. package/bin/cli.js +142 -0
  16. package/bin/mindrian-mcp-server.cjs +182 -0
  17. package/bin/mindrian-tools.cjs +765 -0
  18. package/commands/act.md +439 -0
  19. package/commands/admin.md +404 -0
  20. package/commands/analyze-needs.md +42 -0
  21. package/commands/analyze-systems.md +39 -0
  22. package/commands/analyze-timing.md +42 -0
  23. package/commands/auto-explore.md +64 -0
  24. package/commands/beautiful-question.md +40 -0
  25. package/commands/brain-derive.md +78 -0
  26. package/commands/build-knowledge.md +42 -0
  27. package/commands/build-thesis.md +46 -0
  28. package/commands/causal.md +234 -0
  29. package/commands/challenge-assumptions.md +33 -0
  30. package/commands/compare-ventures.md +83 -0
  31. package/commands/dashboard.md +110 -0
  32. package/commands/deep-grade.md +82 -0
  33. package/commands/diagnose.md +58 -0
  34. package/commands/diagnostics.md +151 -0
  35. package/commands/doctor.md +151 -0
  36. package/commands/dominant-designs.md +40 -0
  37. package/commands/explain-decision.md +87 -0
  38. package/commands/explore-domains.md +42 -0
  39. package/commands/explore-futures.md +40 -0
  40. package/commands/explore-trends.md +42 -0
  41. package/commands/export.md +103 -0
  42. package/commands/file-meeting.md +724 -0
  43. package/commands/find-analogies.md +188 -0
  44. package/commands/find-bottlenecks.md +62 -0
  45. package/commands/find-connections.md +76 -0
  46. package/commands/funding.md +81 -0
  47. package/commands/grade.md +203 -0
  48. package/commands/graph.md +128 -0
  49. package/commands/hat-briefing.md +125 -0
  50. package/commands/heal.md +196 -0
  51. package/commands/help.md +399 -0
  52. package/commands/hmi-status.md +172 -0
  53. package/commands/jtbd.md +241 -0
  54. package/commands/leadership.md +73 -0
  55. package/commands/lean-canvas.md +40 -0
  56. package/commands/macro-trends.md +40 -0
  57. package/commands/map-unknowns.md +40 -0
  58. package/commands/memory.md +173 -0
  59. package/commands/models.md +175 -0
  60. package/commands/mos-reason.md +285 -0
  61. package/commands/mullins.md +120 -0
  62. package/commands/new-project.md +481 -0
  63. package/commands/onboard.md +434 -0
  64. package/commands/operator.md +149 -0
  65. package/commands/opportunities.md +144 -0
  66. package/commands/organize.md +497 -0
  67. package/commands/persona.md +198 -0
  68. package/commands/pipeline.md +112 -0
  69. package/commands/present.md +91 -0
  70. package/commands/publish.md +201 -0
  71. package/commands/query.md +124 -0
  72. package/commands/radar.md +72 -0
  73. package/commands/reanalyze.md +91 -0
  74. package/commands/research.md +196 -0
  75. package/commands/room.md +352 -0
  76. package/commands/rooms.md +598 -0
  77. package/commands/root-cause.md +40 -0
  78. package/commands/rs-experts.md +85 -0
  79. package/commands/rs-explain.md +100 -0
  80. package/commands/rs-fetch.md +94 -0
  81. package/commands/rs-thesis.md +85 -0
  82. package/commands/scenario-plan.md +40 -0
  83. package/commands/scheduled-tasks.md +285 -0
  84. package/commands/score-innovation.md +43 -0
  85. package/commands/scout.md +239 -0
  86. package/commands/setup.md +618 -0
  87. package/commands/snapshot.md +147 -0
  88. package/commands/speakers.md +84 -0
  89. package/commands/splash.md +28 -0
  90. package/commands/status.md +75 -0
  91. package/commands/structure-argument.md +42 -0
  92. package/commands/suggest-next.md +80 -0
  93. package/commands/systems-thinking.md +40 -0
  94. package/commands/think-hats.md +42 -0
  95. package/commands/update.md +181 -0
  96. package/commands/user-needs.md +40 -0
  97. package/commands/validate.md +40 -0
  98. package/commands/value-proposition.md +61 -0
  99. package/commands/vault.md +180 -0
  100. package/commands/visualize.md +52 -0
  101. package/commands/whitespace.md +507 -0
  102. package/commands/wiki.md +69 -0
  103. package/hooks/hooks.json +381 -0
  104. package/hooks/run-hook.cmd +64 -0
  105. package/lib/__init__.py +0 -0
  106. package/lib/__pycache__/__init__.cpython-312.pyc +0 -0
  107. package/lib/agents/auto-explore-agent.cjs +1043 -0
  108. package/lib/agents/reverse-salient-agent.cjs +679 -0
  109. package/lib/agents/tension-hook-agent.cjs +544 -0
  110. package/lib/brain/ROOM.md +44 -0
  111. package/lib/brain/chain-recommender.cjs +301 -0
  112. package/lib/chat/chat-context.js +185 -0
  113. package/lib/chat/chat-panel.js +721 -0
  114. package/lib/chat/fabric-chat.cjs +288 -0
  115. package/lib/chat/generative-tools.js +219 -0
  116. package/lib/conversation/ROOM.md +39 -0
  117. package/lib/conversation/classifier-rules.json +38 -0
  118. package/lib/conversation/classifier.cjs +264 -0
  119. package/lib/conversation/operator.cjs +287 -0
  120. package/lib/copy/115-spec-strings.cjs +55 -0
  121. package/lib/core/__init__.py +0 -0
  122. package/lib/core/__nav-stub.cjs +14 -0
  123. package/lib/core/__pycache__/__init__.cpython-312.pyc +0 -0
  124. package/lib/core/__pycache__/rs-math.cpython-312.pyc +0 -0
  125. package/lib/core/__pycache__/rs_cache.cpython-312.pyc +0 -0
  126. package/lib/core/__pycache__/rs_corpus.cpython-312.pyc +0 -0
  127. package/lib/core/__pycache__/rs_hybrid.cpython-312.pyc +0 -0
  128. package/lib/core/__pycache__/rs_math.cpython-312.pyc +0 -0
  129. package/lib/core/__pycache__/rs_rooms.cpython-312.pyc +0 -0
  130. package/lib/core/artifact-id.cjs +148 -0
  131. package/lib/core/asset-ops.cjs +151 -0
  132. package/lib/core/auto-commit-throttle.cjs +129 -0
  133. package/lib/core/bearer-token.cjs +199 -0
  134. package/lib/core/brain-client.cjs +865 -0
  135. package/lib/core/brain-derivation-prompts.cjs +326 -0
  136. package/lib/core/brain-derivation-queue.cjs +431 -0
  137. package/lib/core/brain-derivation.cjs +580 -0
  138. package/lib/core/brain-md-schema.cjs +528 -0
  139. package/lib/core/brain-md-staleness.cjs +357 -0
  140. package/lib/core/brain-response-sanitize.cjs +188 -0
  141. package/lib/core/bridge-writer.cjs +477 -0
  142. package/lib/core/chat-context-builder.cjs +253 -0
  143. package/lib/core/cross-room-aggregator.cjs +762 -0
  144. package/lib/core/daily-briefing.cjs +438 -0
  145. package/lib/core/decision-capture.cjs +618 -0
  146. package/lib/core/deep-links.cjs +82 -0
  147. package/lib/core/dispatch-optimizer.cjs +354 -0
  148. package/lib/core/dual-path-detector.cjs +84 -0
  149. package/lib/core/dual-path-detector.test.cjs +334 -0
  150. package/lib/core/exports-log.cjs +79 -0
  151. package/lib/core/feynman-minto-invariants.cjs +605 -0
  152. package/lib/core/folder-memory-async.cjs +338 -0
  153. package/lib/core/folder-memory-shared.cjs +890 -0
  154. package/lib/core/folder-memory.cjs +416 -0
  155. package/lib/core/framework-chain-composer.cjs +411 -0
  156. package/lib/core/frontmatter-schemas.cjs +330 -0
  157. package/lib/core/git-ops.cjs +141 -0
  158. package/lib/core/graph-ops.cjs +258 -0
  159. package/lib/core/hat-persistence.cjs +362 -0
  160. package/lib/core/index.cjs +60 -0
  161. package/lib/core/integration-registry.cjs +232 -0
  162. package/lib/core/intelligence-cascade.cjs +661 -0
  163. package/lib/core/lazygraph-ops.cjs +1057 -0
  164. package/lib/core/lru-cache.cjs +139 -0
  165. package/lib/core/mcp-profiles.cjs +182 -0
  166. package/lib/core/meeting-ops.cjs +54 -0
  167. package/lib/core/memory-ops.cjs +600 -0
  168. package/lib/core/migrations/ROOM.md +33 -0
  169. package/lib/core/migrations/phase-109-nodes-provenance.cjs +339 -0
  170. package/lib/core/migrations/phase-109-session-focus.cjs +99 -0
  171. package/lib/core/model-profiles.cjs +246 -0
  172. package/lib/core/mullins-scaffold.cjs +160 -0
  173. package/lib/core/nav-dial.cjs +316 -0
  174. package/lib/core/navigation/ROOM.md +15 -0
  175. package/lib/core/navigation/explanation.cjs +43 -0
  176. package/lib/core/navigation/focus.cjs +135 -0
  177. package/lib/core/navigation/ingestion.cjs +82 -0
  178. package/lib/core/navigation/insights.cjs +350 -0
  179. package/lib/core/navigation/memory-events.cjs +118 -0
  180. package/lib/core/navigation/neighborhood.cjs +78 -0
  181. package/lib/core/navigation/packet.cjs +182 -0
  182. package/lib/core/navigation/room-home.cjs +127 -0
  183. package/lib/core/navigation/transitions.cjs +82 -0
  184. package/lib/core/navigation-engine-shared.cjs +242 -0
  185. package/lib/core/navigation-engine.cjs +664 -0
  186. package/lib/core/navigation.cjs +60 -0
  187. package/lib/core/nl-graph-queries.cjs +164 -0
  188. package/lib/core/offer-presenter.cjs +406 -0
  189. package/lib/core/opportunity-extractor.cjs +183 -0
  190. package/lib/core/opportunity-ops.cjs +1371 -0
  191. package/lib/core/persona-ops.cjs +537 -0
  192. package/lib/core/persona-taxonomy.cjs +190 -0
  193. package/lib/core/platform-gates.cjs +120 -0
  194. package/lib/core/platform.cjs +257 -0
  195. package/lib/core/proactive-intelligence.cjs +528 -0
  196. package/lib/core/problem-type-router.cjs +315 -0
  197. package/lib/core/reasoning-ops.cjs +639 -0
  198. package/lib/core/reverse-salient-persona-suffix.cjs +115 -0
  199. package/lib/core/room-classifier-strict-mode.cjs +229 -0
  200. package/lib/core/room-db.cjs +127 -0
  201. package/lib/core/room-ops-async.cjs +92 -0
  202. package/lib/core/room-ops-shared.cjs +64 -0
  203. package/lib/core/room-ops-sync.cjs +70 -0
  204. package/lib/core/room-ops.cjs +32 -0
  205. package/lib/core/room-type-detector.cjs +386 -0
  206. package/lib/core/rs-brain-substrate-prompts.cjs +129 -0
  207. package/lib/core/rs-brain-substrate.cjs +570 -0
  208. package/lib/core/rs-breakthrough-scorer.cjs +255 -0
  209. package/lib/core/rs-canon-violations.cjs +82 -0
  210. package/lib/core/rs-chain-feeder.cjs +343 -0
  211. package/lib/core/rs-commercial-assessor.cjs +280 -0
  212. package/lib/core/rs-differential-scorer.cjs +376 -0
  213. package/lib/core/rs-domain-analyzer.cjs +385 -0
  214. package/lib/core/rs-egress-prompts.cjs +113 -0
  215. package/lib/core/rs-egress-telemetry.cjs +225 -0
  216. package/lib/core/rs-egress-violations.cjs +53 -0
  217. package/lib/core/rs-expert-mapper.cjs +467 -0
  218. package/lib/core/rs-fetcher-academic.cjs +697 -0
  219. package/lib/core/rs-fetcher-experts.cjs +314 -0
  220. package/lib/core/rs-fetcher-industry.cjs +731 -0
  221. package/lib/core/rs-fetcher-patents.cjs +564 -0
  222. package/lib/core/rs-innovation-classifier.cjs +194 -0
  223. package/lib/core/rs-mind-map.cjs +656 -0
  224. package/lib/core/rs-neo4j-writer.cjs +388 -0
  225. package/lib/core/rs-nl-to-query.cjs +425 -0
  226. package/lib/core/rs-pinecone-bridge.cjs +303 -0
  227. package/lib/core/rs-preprocessor.cjs +350 -0
  228. package/lib/core/rs-query-matrix.cjs +316 -0
  229. package/lib/core/rs-query-to-text.cjs +438 -0
  230. package/lib/core/rs-sqlite-mirror.cjs +443 -0
  231. package/lib/core/rs-thesis-generator.cjs +188 -0
  232. package/lib/core/rs_cache.py +479 -0
  233. package/lib/core/rs_corpus.py +468 -0
  234. package/lib/core/rs_hybrid.py +586 -0
  235. package/lib/core/rs_math.py +287 -0
  236. package/lib/core/rs_rooms.py +193 -0
  237. package/lib/core/scheduled-scanner.cjs +463 -0
  238. package/lib/core/scratchpad-ops.cjs +201 -0
  239. package/lib/core/section-8-trace-schema.cjs +138 -0
  240. package/lib/core/section-registry.cjs +111 -0
  241. package/lib/core/session-state.cjs +144 -0
  242. package/lib/core/shallow-doc-parser.cjs +174 -0
  243. package/lib/core/shallow-doc-parser.test.cjs +226 -0
  244. package/lib/core/skill-activation-router.cjs +284 -0
  245. package/lib/core/state-ops.cjs +46 -0
  246. package/lib/core/statusline-cache.cjs +266 -0
  247. package/lib/core/token-estimator.cjs +348 -0
  248. package/lib/core/user-archetype.cjs +239 -0
  249. package/lib/core/user-md-ops.cjs +524 -0
  250. package/lib/core/visual-ops.cjs +624 -0
  251. package/lib/core/write-lock.cjs +149 -0
  252. package/lib/graph/canvas-graph.js +467 -0
  253. package/lib/graph/constellation-config.cjs +299 -0
  254. package/lib/graph/graph-detail-panel.js +165 -0
  255. package/lib/hmi/ROOM.md +47 -0
  256. package/lib/hmi/across-session-memory.cjs +604 -0
  257. package/lib/hmi/cross-room-memory.cjs +575 -0
  258. package/lib/hmi/decoy-tier.cjs +395 -0
  259. package/lib/hmi/jtbd-classifier.cjs +219 -0
  260. package/lib/hmi/jtbd-state.cjs +199 -0
  261. package/lib/hmi/jtbd-taxonomy.json +392 -0
  262. package/lib/hmi/selector-dispatcher.cjs +546 -0
  263. package/lib/hmi/selector-telemetry.cjs +263 -0
  264. package/lib/hmi/shape-f0-renderer.cjs +139 -0
  265. package/lib/hmi/shape-f1-fallback.cjs +80 -0
  266. package/lib/hmi/shape-f1-renderer.cjs +138 -0
  267. package/lib/hmi/shape-f2-renderer.cjs +132 -0
  268. package/lib/hmi/shape-f3-renderer.cjs +66 -0
  269. package/lib/hmi/shape-f4-renderer.cjs +72 -0
  270. package/lib/hmi/shape-f5-renderer.cjs +155 -0
  271. package/lib/hmi/shape-f6-plan-review-renderer.cjs +312 -0
  272. package/lib/hmi/shape-f6-renderer.cjs +144 -0
  273. package/lib/hmi/shape-g-renderer.cjs +219 -0
  274. package/lib/hmi/shape-h-renderer.cjs +222 -0
  275. package/lib/hmi/tier-check.cjs +63 -0
  276. package/lib/import/PRECONDITIONS.md +41 -0
  277. package/lib/import/branding.cjs +210 -0
  278. package/lib/import/branding.test.cjs +235 -0
  279. package/lib/import/classifications-sync.cjs +104 -0
  280. package/lib/import/classifications-sync.test.cjs +129 -0
  281. package/lib/import/enricher.cjs +296 -0
  282. package/lib/import/enricher.test.cjs +273 -0
  283. package/lib/import/integration.test.cjs +376 -0
  284. package/lib/import/manifest.cjs +129 -0
  285. package/lib/import/manifest.schema.json +185 -0
  286. package/lib/import/manifest.test.cjs +123 -0
  287. package/lib/import/meeting-detector.cjs +92 -0
  288. package/lib/import/meeting-detector.test.cjs +100 -0
  289. package/lib/import/person-detector.cjs +229 -0
  290. package/lib/import/person-detector.test.cjs +149 -0
  291. package/lib/import/report.cjs +186 -0
  292. package/lib/import/report.test.cjs +186 -0
  293. package/lib/import/room-md-scaffolder.cjs +49 -0
  294. package/lib/import/router.cjs +224 -0
  295. package/lib/import/router.test.cjs +356 -0
  296. package/lib/import/run-all-tests.cjs +36 -0
  297. package/lib/import/smoke-test.cjs +213 -0
  298. package/lib/import/smoke-test.test.cjs +148 -0
  299. package/lib/import/test-fixtures/collision-vault/preexisting-room/STATE.md +8 -0
  300. package/lib/import/test-fixtures/collision-vault/preexisting-room/problem-definition/onboarding/onboarding.md +7 -0
  301. package/lib/import/test-fixtures/collision-vault/source/onboarding.md +5 -0
  302. package/lib/import/test-fixtures/obsidian-vault/.obsidian/workspace.json +1 -0
  303. package/lib/import/test-fixtures/obsidian-vault/notes/with-wikilinks.md +4 -0
  304. package/lib/import/test-fixtures/tiny-vault/notes/2026-01-15-team-sync.md +9 -0
  305. package/lib/import/test-fixtures/tiny-vault/notes/empty.md +3 -0
  306. package/lib/import/test-fixtures/tiny-vault/notes/onboarding.md +5 -0
  307. package/lib/import/test-fixtures/tiny-vault/notes/pricing.md +5 -0
  308. package/lib/import/test-fixtures/tiny-vault/notes/random.md +4 -0
  309. package/lib/import/undo.test.cjs +199 -0
  310. package/lib/import/vault-scanner.cjs +105 -0
  311. package/lib/import/vault-scanner.test.cjs +67 -0
  312. package/lib/mcp/app-html/dashboard.html +316 -0
  313. package/lib/mcp/app-html/graph.html +428 -0
  314. package/lib/mcp/app-html/mindrian-platform.html +1841 -0
  315. package/lib/mcp/app-html/wiki.html +383 -0
  316. package/lib/mcp/app-views.cjs +322 -0
  317. package/lib/mcp/brain-router.cjs +418 -0
  318. package/lib/mcp/capability-registry.cjs +62 -0
  319. package/lib/mcp/larry-context.cjs +46 -0
  320. package/lib/mcp/larry-server-instructions.md +114 -0
  321. package/lib/mcp/pipeline-state.cjs +275 -0
  322. package/lib/mcp/prompts.cjs +302 -0
  323. package/lib/mcp/resources.cjs +227 -0
  324. package/lib/mcp/session-catchup.cjs +327 -0
  325. package/lib/mcp/surface-detect.cjs +75 -0
  326. package/lib/mcp/tool-router.cjs +1034 -0
  327. package/lib/memory/aaak-compress.cjs +403 -0
  328. package/lib/memory/aaak-compress.test.cjs +288 -0
  329. package/lib/memory/async-artifact-auto-commit.test.cjs +223 -0
  330. package/lib/memory/bearer-token.test.cjs +315 -0
  331. package/lib/memory/brain-cache-lru.test.cjs +259 -0
  332. package/lib/memory/brain-client-query-shape.test.cjs +160 -0
  333. package/lib/memory/brain-derivation-graceful-degradation.test.cjs +1019 -0
  334. package/lib/memory/brain-derivation-queue.test.cjs +539 -0
  335. package/lib/memory/brain-derivation.test.cjs +634 -0
  336. package/lib/memory/brain-derive-command.test.cjs +534 -0
  337. package/lib/memory/brain-md-invariants-validator.test.cjs +704 -0
  338. package/lib/memory/brain-md-schema.test.cjs +467 -0
  339. package/lib/memory/brain-md-staleness.test.cjs +525 -0
  340. package/lib/memory/brain-server-resolution.test.cjs +314 -0
  341. package/lib/memory/chain-recommender.test.cjs +233 -0
  342. package/lib/memory/chat-context.test.cjs +128 -0
  343. package/lib/memory/command-registry.test.cjs +220 -0
  344. package/lib/memory/cross-room-aggregator.test.cjs +909 -0
  345. package/lib/memory/dashboard-server.test.cjs +256 -0
  346. package/lib/memory/debouncer-drain-at-prompt.test.cjs +389 -0
  347. package/lib/memory/decision-capture.test.cjs +632 -0
  348. package/lib/memory/decision-capture.worker.cjs +70 -0
  349. package/lib/memory/explain-decision-command.test.cjs +521 -0
  350. package/lib/memory/explain-decision-footer.test.cjs +316 -0
  351. package/lib/memory/explored-materials-store.cjs +392 -0
  352. package/lib/memory/feynman-minto-guardian.test.cjs +736 -0
  353. package/lib/memory/feynman-minto-invariants.test.cjs +511 -0
  354. package/lib/memory/feynman-prompts-drift.test.cjs +144 -0
  355. package/lib/memory/feynman-prompts.cjs +151 -0
  356. package/lib/memory/feynman-prompts.test.cjs +96 -0
  357. package/lib/memory/folder-memory-quadruple.test.cjs +548 -0
  358. package/lib/memory/folder-memory.test.cjs +503 -0
  359. package/lib/memory/framework-chain-composer.test.cjs +515 -0
  360. package/lib/memory/frontmatter-schema-validator.test.cjs +290 -0
  361. package/lib/memory/heal-command.test.cjs +604 -0
  362. package/lib/memory/index-artifact-transaction.test.cjs +333 -0
  363. package/lib/memory/lazygraph-rs-discoveries-view.test.cjs +122 -0
  364. package/lib/memory/mcp-input-validation.test.cjs +240 -0
  365. package/lib/memory/mcp-server-brain-deps.test.cjs +270 -0
  366. package/lib/memory/mcp-stack-fallback.test.cjs +433 -0
  367. package/lib/memory/minto-debouncer.test.cjs +407 -0
  368. package/lib/memory/minto-debouncer.worker.cjs +46 -0
  369. package/lib/memory/minto-migration-v88.test.cjs +265 -0
  370. package/lib/memory/minto-schema-v88.test.cjs +390 -0
  371. package/lib/memory/mos-status-renderer.test.cjs +631 -0
  372. package/lib/memory/narrative-schema.cjs +376 -0
  373. package/lib/memory/narrative-schema.test.cjs +209 -0
  374. package/lib/memory/nav-dial.test.cjs +414 -0
  375. package/lib/memory/navigation-engine-core.test.cjs +722 -0
  376. package/lib/memory/navigation-invariants.test.cjs +483 -0
  377. package/lib/memory/offer-presenter.test.cjs +554 -0
  378. package/lib/memory/on-stop-snapshot.test.cjs +404 -0
  379. package/lib/memory/pending-tension-store.cjs +373 -0
  380. package/lib/memory/post-compact-reinjection.test.cjs +854 -0
  381. package/lib/memory/post-write-triple.test.cjs +317 -0
  382. package/lib/memory/pre-compact-snapshot.test.cjs +495 -0
  383. package/lib/memory/problem-type-router.test.cjs +656 -0
  384. package/lib/memory/query-efficiency-telemetry.test.cjs +370 -0
  385. package/lib/memory/recompile-room-references.test.cjs +392 -0
  386. package/lib/memory/recompile-room-references.worker.cjs +42 -0
  387. package/lib/memory/record-decision-dual-write.test.cjs +454 -0
  388. package/lib/memory/room-classifier-strict-mode.test.cjs +417 -0
  389. package/lib/memory/room-minto-hook.test.cjs +398 -0
  390. package/lib/memory/rs-discovery-engine.test.cjs +323 -0
  391. package/lib/memory/run-feynman-tests.cjs +1247 -0
  392. package/lib/memory/security-trifecta.test.cjs +312 -0
  393. package/lib/memory/session-start-brain-staleness.test.cjs +363 -0
  394. package/lib/memory/session-start-triple-injection.test.cjs +514 -0
  395. package/lib/memory/sessionstart-banner-formatter.cjs +318 -0
  396. package/lib/memory/sessionstart-minto-banner.test.cjs +373 -0
  397. package/lib/memory/skill-activation-router.test.cjs +419 -0
  398. package/lib/memory/stamp-artifact-write.test.cjs +304 -0
  399. package/lib/memory/statusline-active-room.test.cjs +315 -0
  400. package/lib/memory/statusline-minto-segment.test.cjs +292 -0
  401. package/lib/memory/sync-async-entry-points.test.cjs +204 -0
  402. package/lib/memory/test-bridge-writer-enhanced.cjs +452 -0
  403. package/lib/memory/test-rs-brain-substrate-shape.cjs +529 -0
  404. package/lib/memory/test-rs-brain-substrate.cjs +636 -0
  405. package/lib/memory/test-rs-breakthrough-scorer.cjs +375 -0
  406. package/lib/memory/test-rs-canon-violations.cjs +218 -0
  407. package/lib/memory/test-rs-chain-feeder-core.cjs +344 -0
  408. package/lib/memory/test-rs-chain-feeder-skill-spawn.cjs +297 -0
  409. package/lib/memory/test-rs-commercial-assessor.cjs +385 -0
  410. package/lib/memory/test-rs-differential-scorer.cjs +480 -0
  411. package/lib/memory/test-rs-discovery-engine.cjs +603 -0
  412. package/lib/memory/test-rs-domain-analyzer.cjs +492 -0
  413. package/lib/memory/test-rs-egress-primitives.cjs +420 -0
  414. package/lib/memory/test-rs-expert-mapper.cjs +547 -0
  415. package/lib/memory/test-rs-explain-command.cjs +443 -0
  416. package/lib/memory/test-rs-fetcher-academic.cjs +848 -0
  417. package/lib/memory/test-rs-fetcher-experts.cjs +496 -0
  418. package/lib/memory/test-rs-fetcher-industry.cjs +702 -0
  419. package/lib/memory/test-rs-fetcher-patents.cjs +674 -0
  420. package/lib/memory/test-rs-innovation-classifier.cjs +301 -0
  421. package/lib/memory/test-rs-mind-map.cjs +646 -0
  422. package/lib/memory/test-rs-neo4j-writer.cjs +518 -0
  423. package/lib/memory/test-rs-nl-to-query.cjs +449 -0
  424. package/lib/memory/test-rs-pinecone-bridge.cjs +277 -0
  425. package/lib/memory/test-rs-preprocessor.cjs +433 -0
  426. package/lib/memory/test-rs-query-matrix.cjs +391 -0
  427. package/lib/memory/test-rs-query-to-text.cjs +551 -0
  428. package/lib/memory/test-rs-sqlite-mirror.cjs +649 -0
  429. package/lib/memory/test-rs-thesis-generator.cjs +360 -0
  430. package/lib/memory/triple-context-formatter.cjs +473 -0
  431. package/lib/memory/triple-context-formatter.test.cjs +442 -0
  432. package/lib/memory/user-md-persona.test.cjs +565 -0
  433. package/lib/memory/userpromptsubmit-integration.test.cjs +690 -0
  434. package/lib/memory/validators/README.md +157 -0
  435. package/lib/memory/validators/brain-md-invariants.cjs +475 -0
  436. package/lib/memory/validators/brain-substrate-invariants.cjs +285 -0
  437. package/lib/memory/validators/external-academic-invariants.cjs +249 -0
  438. package/lib/memory/validators/external-industry-invariants.cjs +271 -0
  439. package/lib/memory/validators/external-patents-invariants.cjs +266 -0
  440. package/lib/memory/validators/minto-invariants.cjs +62 -0
  441. package/lib/memory/validators/navigation-invariants.cjs +340 -0
  442. package/lib/memory/validators/queue-health.cjs +95 -0
  443. package/lib/memory/validators/snapshot-integrity.cjs +129 -0
  444. package/lib/memory/validators/stale-lifecycle.cjs +116 -0
  445. package/lib/memory/vault-section-minto-generator-atomic.test.cjs +556 -0
  446. package/lib/memory/vault-section-minto-generator-atomic.worker.cjs +73 -0
  447. package/lib/memory/write-lock-atomic.test.cjs +137 -0
  448. package/lib/memory/write-lock-atomic.worker.cjs +55 -0
  449. package/lib/parity/check-parity.cjs +83 -0
  450. package/lib/presentation/presentation-server.cjs +101 -0
  451. package/lib/presentation/presentation-watcher.cjs +123 -0
  452. package/lib/quickview/hub-server.cjs +719 -0
  453. package/lib/quickview/server.cjs +533 -0
  454. package/lib/render/JTBD-PALETTES.md +145 -0
  455. package/lib/render/ROOM.md +59 -0
  456. package/lib/render/render-v2.cjs +486 -0
  457. package/lib/render/render-v2.test.cjs +267 -0
  458. package/lib/render/render.cjs +65 -0
  459. package/lib/state/ROOM.md +46 -0
  460. package/lib/state/state-md-parser.cjs +215 -0
  461. package/lib/statusline/ROOM.md +38 -0
  462. package/lib/statusline/banner-suppression.cjs +50 -0
  463. package/lib/statusline/surface-detect.cjs +85 -0
  464. package/lib/update-bootstrap.sh.template +145 -0
  465. package/lib/vault/frontmatter-schema.cjs +297 -0
  466. package/lib/vault/room-scanner.cjs +352 -0
  467. package/lib/vault/wikilink-builder.cjs +231 -0
  468. package/lib/vault/wikilink-builder.test.cjs +182 -0
  469. package/lib/wiki/graph-links.cjs +281 -0
  470. package/lib/wiki/page-renderer.cjs +229 -0
  471. package/lib/wiki/wiki-chat.cjs +81 -0
  472. package/lib/wiki/wiki-layout.cjs +1459 -0
  473. package/lib/wiki/wiki-search.cjs +142 -0
  474. package/lib/wiki/wiki-server.cjs +678 -0
  475. package/lib/wiki/wiki-watcher.cjs +105 -0
  476. package/lib/workflow/ROOM.md +47 -0
  477. package/lib/workflow/command-resolver.cjs +155 -0
  478. package/lib/workflow/command-resolver.test.cjs +235 -0
  479. package/package.json +44 -0
  480. package/pipelines/analogy/01-decompose.md +80 -0
  481. package/pipelines/analogy/02-abstract.md +87 -0
  482. package/pipelines/analogy/03-search.md +135 -0
  483. package/pipelines/analogy/04-transfer.md +101 -0
  484. package/pipelines/analogy/05-validate.md +106 -0
  485. package/pipelines/analogy/CHAIN.md +56 -0
  486. package/pipelines/discovery/01-explore-domains.md +44 -0
  487. package/pipelines/discovery/02-think-hats.md +50 -0
  488. package/pipelines/discovery/03-analyze-needs.md +54 -0
  489. package/pipelines/discovery/CHAIN.md +37 -0
  490. package/pipelines/thesis/01-structure-argument.md +45 -0
  491. package/pipelines/thesis/02-challenge-assumptions.md +48 -0
  492. package/pipelines/thesis/03-build-thesis.md +54 -0
  493. package/pipelines/thesis/CHAIN.md +37 -0
  494. package/references/brain/causal-directives.md +91 -0
  495. package/references/brain/causal-enrichment.cypher +165 -0
  496. package/references/brain/command-triggers-schema.md +226 -0
  497. package/references/brain/graph-architecture.md +317 -0
  498. package/references/brain/query-patterns.md +460 -0
  499. package/references/brain/room-hierarchy-schema.md +218 -0
  500. package/references/brain/schema.md +76 -0
  501. package/references/capability-radar/capabilities-index.md +241 -0
  502. package/references/capability-radar/changelog-cache.md +81 -0
  503. package/references/causal/causal-schema.md +103 -0
  504. package/references/design/email-template-standard.md +155 -0
  505. package/references/design/graph-visualization-standard.md +178 -0
  506. package/references/document-generation.md +179 -0
  507. package/references/hsi/HSI-TOOLS-REFERENCE.md +222 -0
  508. package/references/import-config.md +141 -0
  509. package/references/integrations/detection-patterns.md +101 -0
  510. package/references/meeting/artifact-template.md +377 -0
  511. package/references/meeting/cross-meeting-intelligence.md +216 -0
  512. package/references/meeting/cross-relationship-patterns.md +202 -0
  513. package/references/meeting/live-join-interface.md +244 -0
  514. package/references/meeting/section-mapping.md +192 -0
  515. package/references/meeting/segment-classification.md +258 -0
  516. package/references/meeting/speaker-profile-template.md +219 -0
  517. package/references/meeting/summary-template.md +348 -0
  518. package/references/meeting/transcript-patterns.md +226 -0
  519. package/references/methodology/analyze-needs.md +135 -0
  520. package/references/methodology/analyze-systems.md +121 -0
  521. package/references/methodology/analyze-timing.md +149 -0
  522. package/references/methodology/beautiful-question.md +109 -0
  523. package/references/methodology/build-knowledge.md +161 -0
  524. package/references/methodology/build-thesis.md +237 -0
  525. package/references/methodology/challenge-assumptions.md +127 -0
  526. package/references/methodology/diagnose.md +169 -0
  527. package/references/methodology/dominant-designs.md +212 -0
  528. package/references/methodology/explore-domains.md +147 -0
  529. package/references/methodology/explore-futures.md +163 -0
  530. package/references/methodology/explore-trends.md +129 -0
  531. package/references/methodology/find-bottlenecks.md +131 -0
  532. package/references/methodology/grade.md +211 -0
  533. package/references/methodology/index.md +97 -0
  534. package/references/methodology/leadership.md +200 -0
  535. package/references/methodology/lean-canvas.md +116 -0
  536. package/references/methodology/macro-trends.md +192 -0
  537. package/references/methodology/map-unknowns.md +137 -0
  538. package/references/methodology/mullins-7-domains.md +104 -0
  539. package/references/methodology/problem-types.md +65 -0
  540. package/references/methodology/root-cause.md +178 -0
  541. package/references/methodology/sapphire-encoding.md +355 -0
  542. package/references/methodology/scenario-plan.md +178 -0
  543. package/references/methodology/score-innovation.md +154 -0
  544. package/references/methodology/structure-argument.md +158 -0
  545. package/references/methodology/systems-thinking.md +159 -0
  546. package/references/methodology/think-hats.md +147 -0
  547. package/references/methodology/triz-matrix.json +751 -0
  548. package/references/methodology/triz-principles.md +501 -0
  549. package/references/methodology/user-needs.md +199 -0
  550. package/references/methodology/validate.md +163 -0
  551. package/references/methodology/value-proposition.md +244 -0
  552. package/references/opportunities/funding-lifecycle.md +103 -0
  553. package/references/opportunities/grant-api-patterns.md +99 -0
  554. package/references/opportunities/opportunity-template.md +84 -0
  555. package/references/personality/assessment-philosophy.md +72 -0
  556. package/references/personality/lexicon.md +100 -0
  557. package/references/personality/persona-chains.md +56 -0
  558. package/references/personality/pws-lexicon-full.md +499 -0
  559. package/references/personality/voice-dna.md +156 -0
  560. package/references/personas/hat-perspectives.md +76 -0
  561. package/references/personas/persona-template.md +63 -0
  562. package/references/pipeline/act-output-contract.md +88 -0
  563. package/references/pipeline/chains-index.md +39 -0
  564. package/references/pws-profile-generation.md +79 -0
  565. package/references/reasoning/reasoning-schema.md +143 -0
  566. package/references/reasoning/reasoning-template.md +68 -0
  567. package/references/reasoning/run-template.md +38 -0
  568. package/references/research/RESEARCH_14_CLAUDE_CODE_SOURCE_ARCHITECTURE.md +209 -0
  569. package/references/research/RESEARCH_15_V1.8_OPTIMIZATION_JTBD.md +375 -0
  570. package/references/research/RESEARCH_16_NATIVE_FIRST_PLUGIN_ARCHITECTURE.md +575 -0
  571. package/references/research/RESEARCH_17_MCP_UI_FRAMEWORKS.md +272 -0
  572. package/references/taxonomy/TAXONOMY.md +192 -0
  573. package/references/templates/MINTO.md +36 -0
  574. package/references/user-research/2026-04-05-leah-lawrence-session.md +202 -0
  575. package/references/vault-kit/README.md +35 -0
  576. package/references/vault-kit/app.json +12 -0
  577. package/references/vault-kit/appearance.json +12 -0
  578. package/references/vault-kit/graph.json +35 -0
  579. package/references/vault-kit/snippets/mindrian-destijl.css +297 -0
  580. package/references/vault-kit/templates/new-artifact.md +37 -0
  581. package/references/vault-kit/templates/new-meeting-note.md +35 -0
  582. package/references/vault-kit/templates/new-team-profile.md +29 -0
  583. package/references/vault-kit/templates/new-xref.md +35 -0
  584. package/references/visual/symbol-system.md +151 -0
  585. package/skills/MOSDeckEngine/SKILL.md +325 -0
  586. package/skills/brain-connector/SKILL.md +114 -0
  587. package/skills/context-engine/SKILL.md +147 -0
  588. package/skills/conversation-mode/SKILL.md +102 -0
  589. package/skills/larry-personality/SKILL.md +219 -0
  590. package/skills/larry-personality/framework-chains.md +92 -0
  591. package/skills/larry-personality/mode-engine.md +185 -0
  592. package/skills/mullins-scaffold/SKILL.md +61 -0
  593. package/skills/mullins-scaffold/scaffold.json +146 -0
  594. package/skills/pws-methodology/SKILL.md +49 -0
  595. package/skills/room-passive/SKILL.md +165 -0
  596. package/skills/room-proactive/SKILL.md +250 -0
  597. package/skills/ui-system/SKILL.md +277 -0
@@ -0,0 +1,428 @@
1
+ <!DOCTYPE html>
2
+ <html lang="en">
3
+ <head>
4
+ <meta charset="UTF-8">
5
+ <meta name="viewport" content="width=device-width, initial-scale=1.0">
6
+ <title>Knowledge Graph</title>
7
+ <link rel="preconnect" href="https://fonts.googleapis.com">
8
+ <link href="https://fonts.googleapis.com/css2?family=Bebas+Neue&family=Inter:wght@400;500;600&family=JetBrains+Mono:wght@400;500&display=swap" rel="stylesheet">
9
+ <style>
10
+ :root {
11
+ --ds-bg: #1a1a1a;
12
+ --ds-surface: #2d2d2d;
13
+ --ds-elevated: #3a3a3a;
14
+ --ds-cream: #f5f1e8;
15
+ --ds-muted: #a8a39f;
16
+ --ds-text: #d4cfc7;
17
+ --ds-border: #404040;
18
+ --ds-red: #A63D2F;
19
+ --ds-blue: #1E3A6E;
20
+ --ds-yellow: #C8A43C;
21
+ --ds-green: #2D6B4A;
22
+ --ds-teal: #2A6B5E;
23
+ --ds-sienna: #B5602A;
24
+ --ds-gray: #5C5A56;
25
+ --ds-amethyst: #6B4E8B;
26
+ --ds-blue-text: #4A7BC8;
27
+ --ds-yellow-text: #C8A43C;
28
+ --ds-teal-text: #4A9B8E;
29
+ --ds-font-display: 'Bebas Neue', sans-serif;
30
+ --ds-font-body: 'Inter', system-ui, sans-serif;
31
+ --ds-font-mono: 'JetBrains Mono', monospace;
32
+ --ds-transition: 150ms ease;
33
+ }
34
+
35
+ *, *::before, *::after { box-sizing: border-box; margin: 0; padding: 0; }
36
+ body {
37
+ font-family: var(--ds-font-body);
38
+ background: var(--ds-bg);
39
+ color: var(--ds-cream);
40
+ line-height: 1.6;
41
+ -webkit-font-smoothing: antialiased;
42
+ min-height: 100vh;
43
+ overflow: hidden;
44
+ }
45
+
46
+ /* Header */
47
+ .graph-header {
48
+ display: flex;
49
+ align-items: center;
50
+ justify-content: space-between;
51
+ padding: 8px 16px;
52
+ background: var(--ds-surface);
53
+ border-bottom: 1px solid var(--ds-border);
54
+ height: 48px;
55
+ }
56
+ .graph-title {
57
+ font-family: var(--ds-font-display);
58
+ font-size: 1.25rem;
59
+ letter-spacing: 0.04em;
60
+ }
61
+ .graph-stats {
62
+ font-family: var(--ds-font-mono);
63
+ font-size: 0.6875rem;
64
+ color: var(--ds-muted);
65
+ letter-spacing: 0.08em;
66
+ }
67
+ .graph-controls {
68
+ display: flex;
69
+ gap: 6px;
70
+ }
71
+ .graph-btn {
72
+ background: var(--ds-bg);
73
+ border: 1px solid var(--ds-border);
74
+ color: var(--ds-muted);
75
+ font-family: var(--ds-font-mono);
76
+ font-size: 0.625rem;
77
+ padding: 4px 8px;
78
+ cursor: pointer;
79
+ letter-spacing: 0.08em;
80
+ text-transform: uppercase;
81
+ transition: var(--ds-transition);
82
+ }
83
+ .graph-btn:hover { border-color: var(--ds-blue); color: var(--ds-cream); }
84
+ .graph-btn.active { border-color: var(--ds-blue); color: var(--ds-cream); background: var(--ds-blue); }
85
+
86
+ /* Accent bar */
87
+ .accent-bar {
88
+ display: flex;
89
+ height: 3px;
90
+ }
91
+ .accent-bar span { flex: 1; }
92
+ .accent-bar span:nth-child(1) { background: var(--ds-red); }
93
+ .accent-bar span:nth-child(2) { background: var(--ds-blue); }
94
+ .accent-bar span:nth-child(3) { background: var(--ds-yellow); }
95
+ .accent-bar span:nth-child(4) { background: var(--ds-cream); }
96
+ .accent-bar span:nth-child(5) { background: var(--ds-bg); }
97
+
98
+ /* Sidebar */
99
+ .graph-sidebar {
100
+ position: fixed;
101
+ top: 51px;
102
+ left: 0;
103
+ width: 180px;
104
+ background: var(--ds-surface);
105
+ border-right: 1px solid var(--ds-border);
106
+ padding: 12px;
107
+ z-index: 80;
108
+ height: calc(100vh - 51px);
109
+ overflow-y: auto;
110
+ }
111
+ .sidebar-title {
112
+ font-family: var(--ds-font-display);
113
+ font-size: 0.875rem;
114
+ letter-spacing: 0.04em;
115
+ margin-bottom: 8px;
116
+ }
117
+ .filter-item {
118
+ display: flex;
119
+ align-items: center;
120
+ gap: 6px;
121
+ padding: 3px 0;
122
+ font-size: 0.6875rem;
123
+ color: var(--ds-muted);
124
+ cursor: pointer;
125
+ transition: var(--ds-transition);
126
+ }
127
+ .filter-item:hover { color: var(--ds-cream); }
128
+ .filter-item input { accent-color: var(--ds-blue); }
129
+ .filter-dot {
130
+ width: 8px;
131
+ height: 8px;
132
+ display: inline-block;
133
+ }
134
+
135
+ /* Graph container */
136
+ .cy-container {
137
+ position: absolute;
138
+ top: 51px;
139
+ left: 180px;
140
+ right: 0;
141
+ bottom: 0;
142
+ background: var(--ds-bg);
143
+ }
144
+
145
+ /* Node info panel */
146
+ .node-info {
147
+ position: fixed;
148
+ bottom: 12px;
149
+ right: 12px;
150
+ background: var(--ds-surface);
151
+ border: 1px solid var(--ds-border);
152
+ padding: 12px 16px;
153
+ max-width: 300px;
154
+ z-index: 90;
155
+ display: none;
156
+ }
157
+ .node-info-title {
158
+ font-family: var(--ds-font-display);
159
+ font-size: 1rem;
160
+ letter-spacing: 0.04em;
161
+ margin-bottom: 4px;
162
+ }
163
+ .node-info-type {
164
+ font-family: var(--ds-font-mono);
165
+ font-size: 0.625rem;
166
+ color: var(--ds-muted);
167
+ letter-spacing: 0.1em;
168
+ text-transform: uppercase;
169
+ }
170
+ .node-info-edges {
171
+ margin-top: 8px;
172
+ font-size: 0.75rem;
173
+ color: var(--ds-text);
174
+ }
175
+
176
+ @media (max-width: 767px) {
177
+ .graph-sidebar { display: none; }
178
+ .cy-container { left: 0; }
179
+ }
180
+
181
+ .loading {
182
+ display: flex;
183
+ align-items: center;
184
+ justify-content: center;
185
+ height: 100vh;
186
+ color: var(--ds-muted);
187
+ font-family: var(--ds-font-mono);
188
+ }
189
+ </style>
190
+ </head>
191
+ <body>
192
+ <div id="app" class="loading">Loading Graph...</div>
193
+
194
+ <script src="https://cdnjs.cloudflare.com/ajax/libs/cytoscape/3.28.1/cytoscape.min.js"></script>
195
+ <script src="https://cdn.jsdelivr.net/npm/@modelcontextprotocol/ext-apps/dist/src/app-with-deps.js"></script>
196
+ <script>
197
+ (async function() {
198
+ var THREAD_COLORS = {
199
+ 'INFORMS': '#4A7BC8',
200
+ 'CONTRADICTS': '#C95A4A',
201
+ 'CONVERGES': '#C8A43C',
202
+ 'ENABLES': '#4A9B72',
203
+ 'INVALIDATES': '#A63D2F',
204
+ 'BELONGS_TO': '#5C5A56',
205
+ 'REASONING_INFORMS': '#6B4E8B',
206
+ 'HSI_CONNECTION': '#4A9B8E',
207
+ 'REVERSE_SALIENT': '#A63D2F',
208
+ 'ANALOGOUS_TO': '#C87137',
209
+ 'STRUCTURALLY_ISOMORPHIC': '#6B4E8B',
210
+ 'RESOLVES_VIA': '#2D6B4A',
211
+ 'CAUSES': '#B5602A',
212
+ 'ROOT_CAUSE_OF': '#C95A4A',
213
+ 'FEEDS_INTO': '#4A9B72',
214
+ 'CO_OCCURS': '#C8A43C'
215
+ };
216
+
217
+ var app = new App();
218
+ var connected = false;
219
+ try {
220
+ await app.connect();
221
+ connected = true;
222
+ } catch (e) {
223
+ console.warn('MCP Apps bridge not available');
224
+ }
225
+
226
+ var cy = null;
227
+ var roomData = null;
228
+
229
+ app.ontoolresult = function(result) {
230
+ try {
231
+ var text = result.content && result.content[0] && result.content[0].text;
232
+ if (text) {
233
+ roomData = JSON.parse(text);
234
+ render(roomData);
235
+ }
236
+ } catch (e) {
237
+ document.getElementById('app').innerHTML = '<p>Error parsing graph data</p>';
238
+ }
239
+ };
240
+
241
+ window.refreshGraph = async function() {
242
+ if (connected) {
243
+ try {
244
+ var result = await app.callServerTool({ name: 'room-graph', arguments: {} });
245
+ if (result && result.content && result.content[0]) {
246
+ roomData = JSON.parse(result.content[0].text);
247
+ render(roomData);
248
+ }
249
+ } catch (e) { console.error('Refresh failed:', e); }
250
+ }
251
+ };
252
+
253
+ window.setLayout = function(name) {
254
+ if (!cy) return;
255
+ cy.layout({ name: name, animate: true, animationDuration: 500, padding: 40 }).run();
256
+ document.querySelectorAll('.layout-btn').forEach(function(btn) {
257
+ btn.classList.toggle('active', btn.dataset.layout === name);
258
+ });
259
+ };
260
+
261
+ window.toggleThread = function(type, visible) {
262
+ if (!cy) return;
263
+ cy.edges().forEach(function(edge) {
264
+ var edgeType = edge.data('type') || edge.data('label');
265
+ if (edgeType === type) {
266
+ if (visible) edge.show(); else edge.hide();
267
+ }
268
+ });
269
+ };
270
+
271
+ window.fitGraph = function() {
272
+ if (cy) cy.fit(null, 40);
273
+ };
274
+
275
+ function escapeHtml(str) {
276
+ if (!str) return '';
277
+ return String(str).replace(/&/g,'&amp;').replace(/</g,'&lt;').replace(/>/g,'&gt;').replace(/"/g,'&quot;');
278
+ }
279
+
280
+ function render(data) {
281
+ var nodes = data.graphNodes || [];
282
+ var edges = data.graphEdges || [];
283
+ var layoutName = data._layout || 'cose';
284
+
285
+ // Collect unique thread types from data
286
+ var threadTypes = {};
287
+ for (var i = 0; i < edges.length; i++) {
288
+ var t = edges[i].data.type || 'INFORMS';
289
+ threadTypes[t] = (threadTypes[t] || 0) + 1;
290
+ }
291
+
292
+ var html = '';
293
+ // Header
294
+ html += '<div class="graph-header">';
295
+ html += '<div class="graph-title">' + escapeHtml(data.name || 'Knowledge Graph') + '</div>';
296
+ html += '<div class="graph-stats">' + nodes.length + ' nodes / ' + edges.length + ' edges</div>';
297
+ html += '<div class="graph-controls">';
298
+ html += '<button class="graph-btn layout-btn' + (layoutName==='cose'?' active':'') + '" data-layout="cose" onclick="setLayout(\'cose\')">COSE</button>';
299
+ html += '<button class="graph-btn layout-btn' + (layoutName==='circle'?' active':'') + '" data-layout="circle" onclick="setLayout(\'circle\')">CIRCLE</button>';
300
+ html += '<button class="graph-btn layout-btn' + (layoutName==='breadthfirst'?' active':'') + '" data-layout="breadthfirst" onclick="setLayout(\'breadthfirst\')">TREE</button>';
301
+ html += '<button class="graph-btn" onclick="fitGraph()">FIT</button>';
302
+ html += '<button class="graph-btn" onclick="refreshGraph()">REFRESH</button>';
303
+ html += '</div>';
304
+ html += '</div>';
305
+
306
+ // Accent bar
307
+ html += '<div class="accent-bar"><span></span><span></span><span></span><span></span><span></span></div>';
308
+
309
+ // Sidebar with thread filters
310
+ html += '<aside class="graph-sidebar">';
311
+ html += '<div class="sidebar-title">THREADS</div>';
312
+ var types = Object.keys(threadTypes).sort();
313
+ for (var j = 0; j < types.length; j++) {
314
+ var tt = types[j];
315
+ var col = THREAD_COLORS[tt] || '#5C5A56';
316
+ html += '<label class="filter-item">';
317
+ html += '<input type="checkbox" checked onchange="toggleThread(\'' + tt + '\', this.checked)">';
318
+ html += '<span class="filter-dot" style="background:' + col + '"></span>';
319
+ html += tt.replace(/_/g, ' ') + ' (' + threadTypes[tt] + ')';
320
+ html += '</label>';
321
+ }
322
+ html += '</aside>';
323
+
324
+ // Graph container
325
+ html += '<div id="cy" class="cy-container"></div>';
326
+
327
+ // Node info panel
328
+ html += '<div id="node-info" class="node-info">';
329
+ html += '<div class="node-info-title" id="info-title"></div>';
330
+ html += '<div class="node-info-type" id="info-type"></div>';
331
+ html += '<div class="node-info-edges" id="info-edges"></div>';
332
+ html += '</div>';
333
+
334
+ document.getElementById('app').innerHTML = html;
335
+ document.getElementById('app').className = '';
336
+
337
+ // Initialize Cytoscape
338
+ cy = cytoscape({
339
+ container: document.getElementById('cy'),
340
+ elements: nodes.concat(edges),
341
+ style: [
342
+ {
343
+ selector: 'node',
344
+ style: {
345
+ 'label': 'data(label)',
346
+ 'background-color': function(ele) { return ele.data('color') || '#4A7BC8'; },
347
+ 'color': '#f5f1e8',
348
+ 'font-size': function(ele) { return ele.data('type') === 'section' ? '11px' : '9px'; },
349
+ 'font-family': 'Inter, sans-serif',
350
+ 'text-valign': 'bottom',
351
+ 'text-margin-y': 4,
352
+ 'width': function(ele) { return ele.data('type') === 'section' ? 32 : 20; },
353
+ 'height': function(ele) { return ele.data('type') === 'section' ? 32 : 20; },
354
+ 'border-width': 1,
355
+ 'border-color': '#404040',
356
+ 'text-wrap': 'ellipsis',
357
+ 'text-max-width': '80px'
358
+ }
359
+ },
360
+ {
361
+ selector: 'edge',
362
+ style: {
363
+ 'line-color': function(ele) { return THREAD_COLORS[ele.data('type')] || '#5C5A56'; },
364
+ 'target-arrow-color': function(ele) { return THREAD_COLORS[ele.data('type')] || '#5C5A56'; },
365
+ 'target-arrow-shape': 'triangle',
366
+ 'width': 1.5,
367
+ 'opacity': 0.7,
368
+ 'curve-style': 'bezier'
369
+ }
370
+ },
371
+ {
372
+ selector: 'edge[type = "ANALOGOUS_TO"]',
373
+ style: {
374
+ 'line-style': 'dashed',
375
+ 'line-dash-pattern': [6, 3]
376
+ }
377
+ },
378
+ {
379
+ selector: 'node:selected',
380
+ style: {
381
+ 'border-width': 3,
382
+ 'border-color': '#C8A43C'
383
+ }
384
+ }
385
+ ],
386
+ layout: { name: layoutName, animate: false, padding: 40 }
387
+ });
388
+
389
+ // Node click handler
390
+ cy.on('tap', 'node', function(evt) {
391
+ var node = evt.target;
392
+ var panel = document.getElementById('node-info');
393
+ var title = document.getElementById('info-title');
394
+ var type = document.getElementById('info-type');
395
+ var edgesDiv = document.getElementById('info-edges');
396
+
397
+ title.textContent = node.data('label') || node.id();
398
+ type.textContent = (node.data('type') || 'node').toUpperCase();
399
+
400
+ var connected = node.connectedEdges();
401
+ var edgeList = [];
402
+ connected.forEach(function(e) {
403
+ var other = e.source().id() === node.id() ? e.target() : e.source();
404
+ edgeList.push((e.data('type')||'--') + ' -> ' + (other.data('label')||other.id()));
405
+ });
406
+ edgesDiv.textContent = edgeList.length > 0 ? edgeList.join(', ') : 'No connections';
407
+
408
+ panel.style.display = 'block';
409
+
410
+ // Update model context on node click
411
+ if (window.connected) {
412
+ app.updateModelContext({
413
+ content: [{ type: 'text', text: 'User selected graph node: ' + node.data('label') + ' (type: ' + node.data('type') + ')' }]
414
+ }).catch(function() {});
415
+ }
416
+ });
417
+
418
+ // Background click hides panel
419
+ cy.on('tap', function(evt) {
420
+ if (evt.target === cy) {
421
+ document.getElementById('node-info').style.display = 'none';
422
+ }
423
+ });
424
+ }
425
+ })();
426
+ </script>
427
+ </body>
428
+ </html>