@automagik/genie 4.260421.32 → 4.260422.1

package/dist/genie.js

@@ -155,6 +155,7 @@ ${bin} set-option -w pane-active-border-style "fg=$COLOR"
         AND (pane_id IS NULL OR pane_id = '')
         AND current_executor_id IS NULL
         AND started_at < now() - interval '1 second' * ${thresholdSeconds}
+        AND id NOT LIKE 'dir:%'
       RETURNING id
     `;for(let row of rows)console.error(`[reconcile] Reset stuck agent ${row.id} from spawning \u2192 error`),recordAuditEvent("worker",row.id,"state_changed","reconciler",{state:"error",reason:"stale_spawn"}).catch(()=>{});let resetIds=rows.map((r)=>r.id),staleWithPane=await sql`
       SELECT id, pane_id FROM agents
@@ -725,8 +726,8 @@ Next steps:`),console.log("  1. Reload tmux: tmux source ~/.tmux.conf"),console.
 `),await promptUninstallFrom(join21(home,".tmux.conf"),"generated by genie-cli","tmux.conf");for(let shellRc of[join21(home,".zshrc"),join21(home,".bashrc")])await promptUninstallFrom(shellRc,"generated by genie-cli",shellRc);let termuxDir=join21(home,".termux"),isTermux=existsSync19(termuxDir)||process.env.TERMUX_VERSION;if(isTermux){let termuxProps=join21(termuxDir,"termux.properties");if(await promptUninstallFrom(termuxProps,"generated by genie-cli","termux.properties"),!contentExists(termuxProps,"generated by genie-cli"))console.log("   Run: termux-reload-settings")}if(console.log(`
 \u2705 Uninstallation complete!`),console.log(`
 Next steps:`),console.log("  1. Reload tmux: tmux source ~/.tmux.conf"),console.log("  2. Restart your shell or run: source ~/.bashrc"),isTermux)console.log("  3. Reload Termux: termux-reload-settings")}var GENIE_CONTENT_MARKERS;var init_shortcuts=__esm(()=>{GENIE_CONTENT_MARKERS=["genie","Ctrl+","split-window","new-window","stty -ixon","Warp-like","bind-key -n","extra-keys","F1=","bind -x"]});var exports_setup={};__export(exports_setup,{setupCommand:()=>setupCommand});import{homedir as homedir18}from"os";import{join as join22}from"path";function printHeader(){console.log(),console.log(`\x1B[1m\x1B[36m${"=".repeat(64)}\x1B[0m`),console.log("\x1B[1m\x1B[36m  Genie Setup Wizard\x1B[0m"),console.log(`\x1B[1m\x1B[36m${"=".repeat(64)}\x1B[0m`),console.log()}function printSection(title,description){if(console.log(),console.log(`\x1B[1m${title}\x1B[0m`),description)console.log(`\x1B[2m${description}\x1B[0m`);console.log()}async function configureSession(config,quick){if(printSection("2. Session Configuration","Configure tmux session settings"),quick)return console.log(`  Using defaults: session="${config.session.name}", window="${config.session.defaultWindow}"`),config;let sessionName=await esm_default5({message:"Session name:",default:config.session.name}),defaultWindow=await esm_default5({message:"Default window name:",default:config.session.defaultWindow}),autoCreate=await esm_default4({message:"Auto-create session on connect?",default:config.session.autoCreate});return config.session={name:sessionName,defaultWindow,autoCreate},config}async function configureTerminal(config,quick){if(printSection("3. Terminal Defaults","Configure default values for term commands"),quick)return console.log(`  Using defaults: timeout=${config.terminal.execTimeout}ms, lines=${config.terminal.readLines}`),config;let timeoutStr=await esm_default5({message:"Exec timeout (milliseconds):",default:String(config.terminal.execTimeout),validate:(v)=>{let n=Number.parseInt(v,10);return!Number.isNaN(n)&&n>0?!0:"Must be a positive number"}}),linesStr=await esm_default5({message:"Read lines (default for genie agent read):",default:String(config.terminal.readLines),validate:(v)=>{let n=Number.parseInt(v,10);return!Number.isNaN(n)&&n>0?!0:"Must be a positive number"}}),worktreeBase=await esm_default5({message:"Worktree base directory (leave empty for ~/.genie/worktrees/<project>/):",default:config.terminal.worktreeBase??""});return config.terminal={execTimeout:Number.parseInt(timeoutStr,10),readLines:Number.parseInt(linesStr,10),...worktreeBase?{worktreeBase}:{}},config}async function configureShortcuts(config,quick){printSection("4. Keyboard Shortcuts","Warp-like tmux shortcuts for quick navigation");let home=homedir18(),tmuxConf=join22(home,".tmux.conf");if(isShortcutsInstalled(tmuxConf))return console.log("  \x1B[32m\u2713\x1B[0m Tmux shortcuts already installed"),config.shortcuts.tmuxInstalled=!0,config;if(console.log("  Available shortcuts:"),console.log("    \x1B[36mCtrl+T\x1B[0m \u2192 New tab (window)"),console.log("    \x1B[36mCtrl+S\x1B[0m \u2192 Vertical split"),console.log("    \x1B[36mCtrl+H\x1B[0m \u2192 Horizontal split"),console.log(),quick)return console.log("  Skipped in quick mode. Run \x1B[36mgenie setup --shortcuts\x1B[0m to install."),config;if(await esm_default4({message:"Install tmux keyboard shortcuts?",default:!1}))console.log(),await installShortcuts(),config.shortcuts.tmuxInstalled=!0,await updateShortcutsConfig({tmuxInstalled:!0});else console.log("  Skipped. Run \x1B[36mgenie shortcuts install\x1B[0m later.");return config}function printCodexResult(result2){if(result2==="changed")console.log("  \x1B[32m\u2713\x1B[0m Codex config updated");else if(result2==="unchanged")console.log("  \x1B[32m\u2713\x1B[0m Codex config already up to date");else console.log("  \x1B[31m\u2717\x1B[0m Failed to update codex config")}async function configureCodex(config,quick){printSection("5. Codex Integration","Configure OpenAI Codex for genie agents");let codexCheck=await checkCommand("codex");if(!codexCheck.exists)return console.log("  \x1B[33m!\x1B[0m Codex CLI not found. Skipping codex integration."),config;if(console.log(`  \x1B[32m\u2713\x1B[0m Codex CLI found (${codexCheck.version??"unknown version"})`),isCodexConfigured())return console.log("  \x1B[32m\u2713\x1B[0m Codex config already configured"),config.codex={configured:!0},config;if(console.log(),console.log("  Genie needs to configure codex for agent communication:"),console.log("    \x1B[36mdisable_paste_burst\x1B[0m \u2192 Reliable tmux command injection"),console.log("    \x1B[36mOTel exporter\x1B[0m       \u2192 Telemetry relay for state detection"),console.log(`  Config: \x1B[2m${contractPath(getCodexConfigPath())}\x1B[0m`),console.log(),quick){let result2=ensureCodexOtelConfig();return printCodexResult(result2),config.codex={configured:result2!=="error"},config}if(await esm_default4({message:"Configure Codex for genie agent integration?",default:!0})){let result2=ensureCodexOtelConfig();printCodexResult(result2),config.codex={configured:result2!=="error"}}else console.log("  Skipped. Run \x1B[36mgenie setup --codex\x1B[0m later.");return config}async function configureDebug(config,quick){if(printSection("6. Debug Options","Logging and debugging settings"),quick)return console.log("  Using defaults: tmuxDebug=false, verbose=false"),config;let tmuxDebug=await esm_default4({message:"Enable tmux debug logging?",default:config.logging.tmuxDebug}),verbose=await esm_default4({message:"Enable verbose mode?",default:config.logging.verbose});return config.logging={tmuxDebug,verbose},config}async function configurePromptMode(config,quick){if(printSection("7. Prompt Mode","Controls how genie injects system prompts into Claude Code"),quick)return console.log(`  Using default: promptMode="${config.promptMode}"`),config;console.log("  append  \u2014 Uses --append-system-prompt-file (preserves Claude Code default system prompt)"),console.log("  system  \u2014 Uses --system-prompt-file (replaces Claude Code default system prompt)"),console.log();let promptMode=await esm_default11({message:"Prompt mode:",choices:[{name:"append (recommended \u2014 preserves CC default)",value:"append"},{name:"system (replaces CC default)",value:"system"}],default:config.promptMode});return config.promptMode=promptMode,config}async function showSummaryAndSave(config){printSection("Summary",`Configuration will be saved to ${contractPath(getGenieConfigPath())}`),console.log(`  Session: \x1B[36m${config.session.name}\x1B[0m (window: ${config.session.defaultWindow})`),console.log(`  Terminal: timeout=${config.terminal.execTimeout}ms, lines=${config.terminal.readLines}`),console.log(`  Shortcuts: ${config.shortcuts.tmuxInstalled?"\x1B[32minstalled\x1B[0m":"\x1B[2mnot installed\x1B[0m"}`),console.log(`  Codex:   ${config.codex?.configured?"\x1B[32mconfigured\x1B[0m":"\x1B[2mnot configured\x1B[0m"}`),console.log(`  Debug: tmux=${config.logging.tmuxDebug}, verbose=${config.logging.verbose}`),console.log(`  Prompt mode: \x1B[36m${config.promptMode}\x1B[0m`),console.log(),config.setupComplete=!0,config.lastSetupAt=new Date().toISOString(),await saveGenieConfig(config),console.log("\x1B[32m\u2713 Configuration saved!\x1B[0m")}async function showCurrentConfig(){let config=await loadGenieConfig();console.log(),console.log("\x1B[1mCurrent Genie Configuration\x1B[0m"),console.log(`\x1B[2m${contractPath(getGenieConfigPath())}\x1B[0m`),console.log(),console.log(JSON.stringify(config,null,2)),console.log()}function printNextSteps(){console.log(),console.log("\x1B[1mNext Steps:\x1B[0m"),console.log(),console.log("  Start a session:  \x1B[36mgenie\x1B[0m"),console.log("  Watch AI work:    \x1B[36mtmux attach -t genie\x1B[0m"),console.log("  Check health:     \x1B[36mgenie doctor\x1B[0m"),console.log()}async function setupCommand(options={}){if(options.show){await showCurrentConfig();return}if(options.reset){await resetConfig(),console.log("\x1B[32m\u2713 Configuration reset to defaults.\x1B[0m"),console.log();return}let config=await loadGenieConfig();if(options.shortcuts){printHeader(),await configureShortcuts(config,!1),await markSetupComplete();return}if(options.terminal){printHeader(),config=await configureTerminal(config,!1),await saveGenieConfig(config),console.log("\x1B[32m\u2713 Terminal configuration saved.\x1B[0m");return}if(options.session){printHeader(),config=await configureSession(config,!1),await saveGenieConfig(config),console.log("\x1B[32m\u2713 Session configuration saved.\x1B[0m");return}if(options.codex){if(printHeader(),config=await configureCodex(config,!1),await saveGenieConfig(config),config.codex?.configured)console.log("\x1B[32m\u2713 Codex configuration saved.\x1B[0m");return}let quick=options.quick??!1;if(printHeader(),quick)console.log("\x1B[2mQuick mode: accepting all defaults\x1B[0m");config=await configureSession(config,quick),config=await configureTerminal(config,quick),config=await configureShortcuts(config,quick),config=await configureCodex(config,quick),config=await configureDebug(config,quick),config=await configurePromptMode(config,quick),await showSummaryAndSave(config),installGenieTmuxConf(),printNextSteps()}function installGenieTmuxConf(){let{existsSync:existsSync20,copyFileSync:copyFileSync2,mkdirSync:mkdirSync10,chmodSync:chmodSync2}=__require("fs"),{resolve:resolve3,dirname:dirname6}=__require("path"),genieHome3=process.env.GENIE_HOME??join22(homedir18(),".genie"),dest=join22(genieHome3,"tmux.conf");if(existsSync20(dest))return;let src=[resolve3(__dirname,"..","..","scripts","tmux","genie.tmux.conf"),resolve3(__dirname,"..","scripts","tmux","genie.tmux.conf")].find((p)=>existsSync20(p));if(!src)return;try{mkdirSync10(genieHome3,{recursive:!0}),copyFileSync2(src,dest),console.log(`\x1B[32m\u2713\x1B[0m Installed genie tmux config to ${dest}`)}catch{}let osc52Src=join22(dirname6(src),"osc52-copy.sh"),osc52Dest=join22(genieHome3,"osc52-copy.sh");if(existsSync20(osc52Src))try{copyFileSync2(osc52Src,osc52Dest),chmodSync2(osc52Dest,493)}catch{}}var __dirname="/home/runner/_work/genie/genie/src/genie-commands";var init_setup=__esm(()=>{init_esm14();init_codex_config();init_genie_config2();init_system_detect();init_shortcuts()});var exports_version={};__export(exports_version,{VERSION:()=>VERSION});import{existsSync as existsSync23,readFileSync as readFileSync17}from"fs";import{dirname as dirname6,resolve as resolve3}from"path";function readVersionFromPackageJson(){let candidates=[resolve3(dirname6(import.meta.dir??__dirname),"..","..","package.json"),resolve3(dirname6(import.meta.dir??__dirname),"..","package.json"),resolve3(dirname6(import.meta.dir??__dirname),"package.json")];for(let candidate of candidates)try{if(existsSync23(candidate)){let pkg=JSON.parse(readFileSync17(candidate,"utf-8"));if(pkg.version)return pkg.version}}catch{}return FALLBACK_VERSION}var __dirname="/home/runner/_work/genie/genie/src/lib",FALLBACK_VERSION="0.0.0-unknown",VERSION;var init_version=__esm(()=>{VERSION=readVersionFromPackageJson()});var exports_agent_directory={};__export(exports_agent_directory,{rm:()=>rm3,resolve:()=>resolve4,ls:()=>ls,loadIdentity:()=>loadIdentity,getProjectRoot:()=>getProjectRoot,get:()=>get2,findSessionByRepo:()=>findSessionByRepo,edit:()=>edit,add:()=>add});import{existsSync as existsSync24}from"fs";import{join as join26}from"path";function getProjectRoot(){if(process.env.GENIE_PROJECT_ROOT)return process.env.GENIE_PROJECT_ROOT;try{let{execSync:execSync6}=__require("child_process");return execSync6("git rev-parse --show-toplevel",{encoding:"utf-8",stdio:["pipe","pipe","pipe"]}).trim()}catch{return process.cwd()}}async function add(entry2,_options){if(!entry2.name||entry2.name.trim()==="")throw Error("Agent name is required.");if(!entry2.dir||entry2.dir.trim()==="")throw Error("Agent directory (--dir) is required.");if(!existsSync24(entry2.dir))throw Error(`Directory does not exist: ${entry2.dir}`);let agentsPath=join26(entry2.dir,"AGENTS.md");if(!existsSync24(agentsPath))throw Error(`AGENTS.md not found in ${entry2.dir}. Each agent directory must contain an AGENTS.md file.`);let full={...entry2,promptMode:entry2.promptMode??"append",registeredAt:new Date().toISOString()},existing=await resolve4(entry2.name);if(existing&&!existing.builtin)throw Error(`Agent "${entry2.name}" already exists. Use "genie dir edit" to update or "genie dir rm" first.`);let metadata=buildMetadata(full),{getConnection:getConnection2}=await Promise.resolve().then(() => (init_db(),exports_db)),sql=await getConnection2();return await sql`
-    INSERT INTO agents (id, role, custom_name, started_at, metadata)
-    VALUES (${`dir:${entry2.name}`}, ${entry2.name}, ${entry2.name}, now(), ${sql.json(metadata)})
+    INSERT INTO agents (id, role, custom_name, started_at, state, metadata)
+    VALUES (${`dir:${entry2.name}`}, ${entry2.name}, ${entry2.name}, now(), ${null}, ${sql.json(metadata)})
     ON CONFLICT (id) DO UPDATE SET metadata = ${sql.json(metadata)}
   `,full}async function rm3(name,options){let{getConnection:getConnection2}=await Promise.resolve().then(() => (init_db(),exports_db)),sql=await getConnection2(),dirRemoved=(await sql`DELETE FROM agents WHERE id = ${`dir:${name}`}`).count>0;if(options?.force){let roleDelete=await sql`DELETE FROM agents WHERE role = ${name}`;return{removed:dirRemoved||roleDelete.count>0}}if(dirRemoved)return{removed:!0};let instances=await sql`SELECT id FROM agents WHERE role = ${name}`;if(instances.length===0)return{removed:!1};let idList=instances.map((r)=>r.id).join(", ");return{removed:!1,message:`No directory entry for "${name}". Active instances: ${idList}. Use 'genie kill <id>' to terminate, or re-run with --force to remove all.`}}async function resolve4(name){let templateTeam=await lookupTemplateTeam(name);try{let{getConnection:getConnection2}=await Promise.resolve().then(() => (init_db(),exports_db)),rows=await(await getConnection2())`
       SELECT role, metadata, created_at FROM agents
@@ -2039,11 +2040,11 @@ ${body}`;writeFileSync12(filePath,output,"utf-8")}function serializeSdkConfig(sd
       HAVING COUNT(*) > 1
        ORDER BY COUNT(*) DESC, custom_name ASC
        LIMIT 200
-    `},queryFn=opts?.query??defaultQuery;return{id:"rot.duplicate-agents",version,riskClass:"low",async query(){return{duplicates:await queryFn()}},shouldFire(state){return state.duplicates.length>0},render(state){let row=state.duplicates[0],subject=`${row.team}/${row.custom_name}`;return{type:"rot.detected",subject,payload:{pattern_id:"pattern-4-duplicate-agents",entity_id:subject,observed_state_json:{team:row.team,custom_name:row.custom_name,dup_count:row.dup_count,agent_ids:row.agent_ids,total_offending_pairs:state.duplicates.length}}}}}}var init_pattern_4_duplicate_agents=__esm(()=>{init_db();init_detectors();registerDetector(createDuplicateAgentsDetector())});function createZombieTeamLeadDetector(opts){let thresholdMs=(opts?.idleMinutes??DEFAULT_IDLE_MINUTES)*60*1000,version=opts?.version??"0.1.0",defaultQuery=async()=>{let sql=await getConnection();return(await sql`
+    `},queryFn=opts?.query??defaultQuery;return{id:"rot.duplicate-agents",version,riskClass:"low",async query(){return{duplicates:await queryFn()}},shouldFire(state){return state.duplicates.length>0},render(state){let row=state.duplicates[0],subject=`${row.team}/${row.custom_name}`;return{type:"rot.detected",subject,payload:{pattern_id:"pattern-4-duplicate-agents",entity_id:subject,observed_state_json:{team:row.team,custom_name:row.custom_name,dup_count:row.dup_count,agent_ids:row.agent_ids,total_offending_pairs:state.duplicates.length}}}}}}var init_pattern_4_duplicate_agents=__esm(()=>{init_db();init_detectors();registerDetector(createDuplicateAgentsDetector())});function teamLeadPredicate(sql){return sql`id IN (SELECT DISTINCT reports_to FROM agents WHERE reports_to IS NOT NULL)`}function createZombieTeamLeadDetector(opts){let thresholdMs=(opts?.idleMinutes??DEFAULT_IDLE_MINUTES)*60*1000,version=opts?.version??"0.1.0",defaultQuery=async()=>{let sql=await getConnection();return(await sql`
       WITH active_leads AS (
         SELECT id, team, state
           FROM agents
-         WHERE role = 'team-lead'
+         WHERE ${teamLeadPredicate(sql)}
            AND team IS NOT NULL
            AND state = ANY(${sql.array([...ALIVE_STATES])})
       ),
@@ -2119,7 +2120,7 @@ ${body}`;writeFileSync12(filePath,output,"utf-8")}function serializeSdkConfig(sd
       team_leads AS (
         SELECT DISTINCT ON (team) team, id AS lead_agent_id, state AS lead_state
           FROM agents
-         WHERE role = 'team-lead'
+         WHERE ${teamLeadPredicate(sql)}
            AND team IS NOT NULL
          ORDER BY team, created_at DESC
       )

package/package.json

@@ -1,6 +1,6 @@
 {
   "name": "@automagik/genie",
-  "version": "4.260421.32",
+  "version": "4.260422.1",
   "description": "Collaborative terminal toolkit for human + AI workflows",
   "type": "module",
   "bin": {

package/plugins/genie/.claude-plugin/plugin.json

@@ -1,6 +1,6 @@
 {
   "name": "genie",
-  "version": "4.260421.32",
+  "version": "4.260422.1",
   "description": "Human-AI partnership for Claude Code. Share a terminal, orchestrate workers, evolve together. Brainstorm ideas, turn them into wishes, execute with /work, validate with /review, and ship as one team.",
   "author": {
     "name": "Namastex Labs"

package/plugins/genie/package.json

@@ -1,6 +1,6 @@
 {
   "name": "genie-plugin",
-  "version": "4.260421.32",
+  "version": "4.260422.1",
   "private": true,
   "description": "Runtime dependencies for genie bundled CLIs",
   "type": "module",

package/src/db/migrations/046_dir_agents_state_null.sql

@@ -0,0 +1,19 @@
+-- Backfill: clear 'spawning'/'error' from directory-agent identity rows.
+--
+-- Directory rows (id prefix `dir:`) are identity records, not runtime spawns.
+-- They never have a pane or executor of their own — state is tracked via
+-- their runtime/executor children. Prior to this fix, directory.add()
+-- INSERTed without a `state` value and the column DEFAULT ('spawning')
+-- applied, causing reconcileStaleSpawns() to flip every dir row to
+-- 'error' ~60s after every `genie serve` boot.
+--
+-- The INSERT is now corrected in agent-directory.ts to pass NULL explicitly,
+-- and reconcileStaleSpawns() skips `dir:%` ids as belt-and-suspenders.
+-- This migration repairs rows already poisoned by the old behavior.
+UPDATE agents
+   SET state = NULL,
+       last_state_change = now()
+ WHERE id LIKE 'dir:%'
+   AND state IN ('spawning', 'error')
+   AND (pane_id IS NULL OR pane_id = '')
+   AND current_executor_id IS NULL;