workflow_manager 0.8.1 → 0.9.0
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- checksums.yaml +4 -4
- data/Gemfile.lock +9 -8
- data/lib/workflow_manager/version.rb +1 -1
- data/start_workflow_manager.sh +5 -5
- metadata +6 -6
checksums.yaml
CHANGED
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@@ -1,7 +1,7 @@
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1
1
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---
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2
2
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SHA256:
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3
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-
metadata.gz:
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4
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-
data.tar.gz:
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3
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+
metadata.gz: 120bc6b3498d6366882d6274765b9996bf6a66b992067716dd5d34b0d12537d7
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4
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+
data.tar.gz: 84b9d14e46363cc6e8e8d93409cd1edca162da3697e590ea68427a02ee8de9c7
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5
5
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SHA512:
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6
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-
metadata.gz:
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|
7
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-
data.tar.gz:
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|
6
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+
metadata.gz: b070889a1ee8d888475c96b40f8ee3b7a42d98654f57507a5bf82536e5936ba56eb9f1ecac632de247d4ea9faf90c1cefa30de5c42bae31f8cb894704399e807
|
|
7
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+
data.tar.gz: 5ddfb1618cdd7b92908d5d76ce5a3ecd5ef3311ab65d5e50abba49be42c1b313be336d55d34551c47f3125a21e60fe32a3dd533707751d91923bae4b5e4b7d5c
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data/Gemfile.lock
CHANGED
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@@ -6,20 +6,21 @@ PATH
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|
|
6
6
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GEM
|
|
7
7
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remote: https://rubygems.org/
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|
8
8
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specs:
|
|
9
|
-
concurrent-ruby (1.2.
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|
9
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+
concurrent-ruby (1.2.3)
|
|
10
10
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connection_pool (2.4.1)
|
|
11
|
-
rack (3.0.
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|
12
|
-
redis (5.0.
|
|
13
|
-
redis-client (>= 0.
|
|
14
|
-
redis-client (0.
|
|
11
|
+
rack (3.0.9)
|
|
12
|
+
redis (5.0.8)
|
|
13
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+
redis-client (>= 0.17.0)
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|
14
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+
redis-client (0.19.1)
|
|
15
15
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connection_pool
|
|
16
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-
sidekiq (7.1
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|
16
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+
sidekiq (7.2.1)
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|
17
17
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concurrent-ruby (< 2)
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|
18
18
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connection_pool (>= 2.3.0)
|
|
19
19
|
rack (>= 2.2.4)
|
|
20
|
-
redis-client (>= 0.
|
|
20
|
+
redis-client (>= 0.19.0)
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|
21
21
|
|
|
22
22
|
PLATFORMS
|
|
23
|
+
ruby
|
|
23
24
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x86_64-linux
|
|
24
25
|
|
|
25
26
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DEPENDENCIES
|
|
@@ -28,4 +29,4 @@ DEPENDENCIES
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|
|
28
29
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workflow_manager!
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|
29
30
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|
|
30
31
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BUNDLED WITH
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|
31
|
-
2.
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|
32
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+
2.5.5
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data/start_workflow_manager.sh
CHANGED
|
@@ -1,12 +1,12 @@
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|
|
1
1
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#!/usr/bin/bash
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|
2
2
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source /usr/local/ngseq/etc/lmod_profile
|
|
3
|
-
module load Dev/Ruby/3.
|
|
4
|
-
module load Tools/Redis/7.
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|
5
|
-
|
|
3
|
+
module load Dev/Ruby/3.2.3
|
|
4
|
+
module load Tools/Redis/7.2.4
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|
5
|
+
. "/usr/local/ngseq/miniconda3/etc/profile.d/conda.sh"
|
|
6
|
+
conda activate gtools_env
|
|
6
7
|
which python
|
|
7
8
|
which g-sub
|
|
8
9
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which g-req
|
|
9
10
|
mkdir -p logs
|
|
10
11
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mkdir -p dbs
|
|
11
|
-
|
|
12
|
-
bundle exec workflow_manager -d druby://fgcz-h-032:40001
|
|
12
|
+
bundle exec workflow_manager -d druby://fgcz-h-031:40001
|
metadata
CHANGED
|
@@ -1,14 +1,14 @@
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|
|
1
1
|
--- !ruby/object:Gem::Specification
|
|
2
2
|
name: workflow_manager
|
|
3
3
|
version: !ruby/object:Gem::Version
|
|
4
|
-
version: 0.
|
|
4
|
+
version: 0.9.0
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|
5
5
|
platform: ruby
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|
6
6
|
authors:
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|
7
7
|
- Functional Genomics Center Zurich
|
|
8
|
-
autorequire:
|
|
8
|
+
autorequire:
|
|
9
9
|
bindir: bin
|
|
10
10
|
cert_chain: []
|
|
11
|
-
date:
|
|
11
|
+
date: 2024-02-06 00:00:00.000000000 Z
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|
12
12
|
dependencies:
|
|
13
13
|
- !ruby/object:Gem::Dependency
|
|
14
14
|
name: bundler
|
|
@@ -98,7 +98,7 @@ homepage: ''
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|
|
98
98
|
licenses:
|
|
99
99
|
- MIT
|
|
100
100
|
metadata: {}
|
|
101
|
-
post_install_message:
|
|
101
|
+
post_install_message:
|
|
102
102
|
rdoc_options: []
|
|
103
103
|
require_paths:
|
|
104
104
|
- lib
|
|
@@ -113,8 +113,8 @@ required_rubygems_version: !ruby/object:Gem::Requirement
|
|
|
113
113
|
- !ruby/object:Gem::Version
|
|
114
114
|
version: '0'
|
|
115
115
|
requirements: []
|
|
116
|
-
rubygems_version: 3.
|
|
117
|
-
signing_key:
|
|
116
|
+
rubygems_version: 3.5.5
|
|
117
|
+
signing_key:
|
|
118
118
|
specification_version: 4
|
|
119
119
|
summary: Workflow Manager manages job submissions using dRuby.
|
|
120
120
|
test_files:
|