workflow_manager 0.4.2 → 0.4.3
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- checksums.yaml +4 -4
- data/lib/workflow_manager/cluster.rb +2 -3
- data/lib/workflow_manager/version.rb +1 -1
- metadata +2 -2
checksums.yaml
CHANGED
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@@ -1,7 +1,7 @@
|
|
|
1
1
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---
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2
2
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SHA1:
|
|
3
|
-
metadata.gz:
|
|
4
|
-
data.tar.gz:
|
|
3
|
+
metadata.gz: 5c0c7cb2ea88880e45d2ac2b11f06c96be4fbef4
|
|
4
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+
data.tar.gz: c6dd0d5119019bd2210c59c7b1c5396732e99760
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|
5
5
|
SHA512:
|
|
6
|
-
metadata.gz:
|
|
7
|
-
data.tar.gz:
|
|
6
|
+
metadata.gz: 5d8f6e258e487ca553b395e0d4129292c7f7b44326a5b8119f3bed50728ef35e8c004007aa0f226a530c719aa586efac683b5459dfd6bd50c57a2c4c8822fc52
|
|
7
|
+
data.tar.gz: 7be6216bc73d63150e2805b108a9ae067ba6a38bf842b098fa1c5562acbd6a2131a298d1fc24f092eb28524e181780499caacb3b4d6b7e098d7303a4b209968f
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|
@@ -98,9 +98,8 @@ module WorkflowManager
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|
|
98
98
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log_file = File.join(@log_dir, new_job_script_base + "_o.log")
|
|
99
99
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err_file = File.join(@log_dir, new_job_script_base + "_e.log")
|
|
100
100
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command = "tsp sh -c 'bash #{new_job_script} 1> #{log_file} 2> #{err_file}'"
|
|
101
|
-
|
|
102
|
-
|
|
103
|
-
[pid.to_s, log_file, command]
|
|
101
|
+
job_id = `#{command}`
|
|
102
|
+
[job_id.to_s, log_file, command]
|
|
104
103
|
end
|
|
105
104
|
end
|
|
106
105
|
def job_running?(pid)
|
metadata
CHANGED
|
@@ -1,14 +1,14 @@
|
|
|
1
1
|
--- !ruby/object:Gem::Specification
|
|
2
2
|
name: workflow_manager
|
|
3
3
|
version: !ruby/object:Gem::Version
|
|
4
|
-
version: 0.4.
|
|
4
|
+
version: 0.4.3
|
|
5
5
|
platform: ruby
|
|
6
6
|
authors:
|
|
7
7
|
- Functional Genomics Center Zurich
|
|
8
8
|
autorequire:
|
|
9
9
|
bindir: bin
|
|
10
10
|
cert_chain: []
|
|
11
|
-
date: 2019-
|
|
11
|
+
date: 2019-12-05 00:00:00.000000000 Z
|
|
12
12
|
dependencies:
|
|
13
13
|
- !ruby/object:Gem::Dependency
|
|
14
14
|
name: bundler
|