viral_seq 1.2.9 → 1.3.0

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data/README.md

@@ -179,6 +179,10 @@ qc_seqhash.sdrm_hiv_pr(cut_off)
 
 ## Updates
 
+### Version 1.3.0-08302021
+
+  1. Fixed a bug in the `tcs` pipeline. 
+
 ### Version 1.2.9-08022021
 
   1. Fixed a bug when reading the input primer sequences in lowercases.

data/bin/tcs

@@ -401,7 +401,11 @@ begin
       when 4
         joined_sh = shp.join2(model: :indiv)
       end
-      return joined_sh
+      if joined_sh
+        return joined_sh
+      else
+        joined_sh = ViralSeq::SeqHash.new
+      end
     end
 
     if primer[:end_join]

data/lib/viral_seq/version.rb

@@ -2,6 +2,6 @@
 # version info and histroy
 
 module ViralSeq
-  VERSION = "1.2.9"
+  VERSION = "1.3.0"
   TCS_VERSION = "2.3.8"
 end

metadata

@@ -1,7 +1,7 @@
 --- !ruby/object:Gem::Specification
 name: viral_seq
 version: !ruby/object:Gem::Version
-  version: 1.2.9
+  version: 1.3.0
 platform: ruby
 authors:
 - Shuntai Zhou
@@ -9,7 +9,7 @@ authors:
 autorequire:
 bindir: bin
 cert_chain: []
-date: 2021-08-02 00:00:00.000000000 Z
+date: 2021-08-30 00:00:00.000000000 Z
 dependencies:
 - !ruby/object:Gem::Dependency
   name: bundler