viral_seq 1.0.12 → 1.0.13
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- checksums.yaml +4 -4
- data/Gemfile.lock +1 -1
- data/README.md +7 -2
- data/lib/viral_seq/math.rb +3 -3
- data/lib/viral_seq/version.rb +1 -1
- metadata +1 -1
checksums.yaml
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@@ -1,7 +1,7 @@
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---
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SHA256:
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metadata.gz:
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data.tar.gz:
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metadata.gz: 7816fd2b8da8109a24a33b8663e5f4fa5f098ed590c7403f909b593ebdd78c2f
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4
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data.tar.gz: adaffa3e35268eaed0bb2d0c5a6ba387f8b09bc04561a3714f9e155a55466cd5
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SHA512:
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metadata.gz:
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data.tar.gz:
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metadata.gz: 5bfbb3c2e78ae8ef01b1750b5135a76b7fdf65ecc00ccfe141e488154adfc9b0ddff42a58ee9f682f46576060632d12cd6e540bea26e81d8bd9e346f5e7bca84
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data.tar.gz: 3b491d3070f2e7aacc73c1c9f4942fe770f2c0e4eebe5c021e5558ce7fa0e4299c44ddde51b07b4c3118d7832236be9703707209ea0ebfb6591a576871ad0804
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data/Gemfile.lock
CHANGED
data/README.md
CHANGED
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@@ -80,11 +80,16 @@ qc_seqhash.sdrm_hiv_pr(cut_off)
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```
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## Known issues
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-
1. have a conflict with rails
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84
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2. Update on 03032021. Still have conflict. But in rails gem file, can just use `requires: false` globally and only require "viral_seq" when the module is needed in controller
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1. ~~have a conflict with rails.~~
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84
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2. ~~Update on 03032021. Still have conflict. But in rails gem file, can just use `requires: false` globally and only require "viral_seq" when the module is needed in controller.~~
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85
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3. The conflict seems to be resovled. It was from a combination of using `!` as a function for factorial and the gem name `viral_seq`. @_@
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## Updates
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### Version 1.1.3-03032021
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1. Fixed the conflict with rails.
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### Version 1.1.2-03032021
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1. Fixed an issue that may cause conflicts with ActiveRecord.
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data/lib/viral_seq/math.rb
CHANGED
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@@ -67,7 +67,7 @@ module ViralSeq
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67
67
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@k = k
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@poisson_hash = {}
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(0..k).each do |n|
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70
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-
p = (rate**n * ::Math::E**(-rate))
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+
p = (rate**n * ::Math::E**(-rate))/n.factorial
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@poisson_hash[n] = p
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end
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end
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@@ -155,9 +155,9 @@ class Integer
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# factorial method for an Integer
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156
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# @return [Integer] factorial for given Integer
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# @example factorial for 5
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158
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-
#
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158
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+
# 5.factorial
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# => 120
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160
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-
def
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160
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+
def factorial
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if self == 0
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return 1
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else
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data/lib/viral_seq/version.rb
CHANGED