viral_seq 1.0.11 → 1.0.12
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- checksums.yaml +4 -4
- data/README.md +6 -1
- data/lib/viral_seq/enumerable.rb +0 -10
- data/lib/viral_seq/version.rb +1 -1
- metadata +2 -2
checksums.yaml
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@@ -1,7 +1,7 @@
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---
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SHA256:
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metadata.gz:
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data.tar.gz:
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metadata.gz: 97ecf609d8927a59e1174ea5f01794e3e9c1f598cf547f72cc53a66465817c0e
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data.tar.gz: d9c8deeb6452075aa49a63f02e8e6a6f58ef10d8969065987ffa05651e2ad2b8
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SHA512:
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metadata.gz:
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data.tar.gz:
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metadata.gz: 2f8dc3fd2c8e5f8cb0bdd130451a186790d1b9d102b66851f24d843368926632e375515e81df3e62b60dee8400effb17e9e15fcc74eab4b97c6f33dbc5cba358
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data.tar.gz: a53032e574e844411c8b11ed07f238cba1a795f819fb3cae3d5cca129f7bcd38312efb30a87520b35540915ff461ce03e4448a6cdade50bda1c77497b5a03aef
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data/README.md
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@@ -81,12 +81,17 @@ qc_seqhash.sdrm_hiv_pr(cut_off)
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## Known issues
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1. have a conflict with rails.
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2. Update on 03032021. Still have conflict. But in rails gem file, can just use `requires: false` globally and only require "viral_seq" when the module is needed in controller.
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## Updates
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### Version 1.1.2-03032021
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89
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90
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1. Fixed an issue that may cause conflicts with ActiveRecord.
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### Version 1.1.1-03022021
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1. Fixed
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1. Fixed an issue when calculating Poisson cutoff for minority mutations `ViralSeq::SeqHash.pm`.
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2. fixed an issue loading class 'OptionParser'in some ruby environments.
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### Version 1.1.0-11112020:
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data/lib/viral_seq/enumerable.rb
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# array = [1,2,3,4,5,6,7,8,9,10]
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# array.median
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# => 5.5
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# @example sum
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# array = [1,2,3,4,5,6,7,8,9,10]
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# array.sum
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# => 55
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# @example average number (mean)
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# array = [1,2,3,4,5,6,7,8,9,10]
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# array.mean
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@@ -45,12 +41,6 @@ module Enumerable
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len % 2 == 1 ? sorted[len/2] : (sorted[len/2 - 1] + sorted[len/2]).to_f / 2
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end
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# generate summed value
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# @return [Numeric] summed value
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def sum
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self.inject(0){|accum, i| accum + i }
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end
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-
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# generate mean number
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# @return [Float] mean value
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def mean
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data/lib/viral_seq/version.rb
CHANGED
metadata
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@@ -1,7 +1,7 @@
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--- !ruby/object:Gem::Specification
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name: viral_seq
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version: !ruby/object:Gem::Version
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version: 1.0.
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version: 1.0.12
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platform: ruby
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authors:
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- Shuntai Zhou
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@@ -9,7 +9,7 @@ authors:
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autorequire:
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bindir: bin
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cert_chain: []
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date: 2021-03-
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date: 2021-03-04 00:00:00.000000000 Z
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dependencies:
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- !ruby/object:Gem::Dependency
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name: bundler
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