viral_seq 1.0.11 → 1.0.12
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- checksums.yaml +4 -4
- data/README.md +6 -1
- data/lib/viral_seq/enumerable.rb +0 -10
- data/lib/viral_seq/version.rb +1 -1
- metadata +2 -2
checksums.yaml
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---
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SHA256:
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metadata.gz:
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data.tar.gz:
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metadata.gz: 97ecf609d8927a59e1174ea5f01794e3e9c1f598cf547f72cc53a66465817c0e
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data.tar.gz: d9c8deeb6452075aa49a63f02e8e6a6f58ef10d8969065987ffa05651e2ad2b8
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metadata.gz:
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metadata.gz: 2f8dc3fd2c8e5f8cb0bdd130451a186790d1b9d102b66851f24d843368926632e375515e81df3e62b60dee8400effb17e9e15fcc74eab4b97c6f33dbc5cba358
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data.tar.gz: a53032e574e844411c8b11ed07f238cba1a795f819fb3cae3d5cca129f7bcd38312efb30a87520b35540915ff461ce03e4448a6cdade50bda1c77497b5a03aef
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data/README.md
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@@ -81,12 +81,17 @@ qc_seqhash.sdrm_hiv_pr(cut_off)
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## Known issues
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1. have a conflict with rails.
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2. Update on 03032021. Still have conflict. But in rails gem file, can just use `requires: false` globally and only require "viral_seq" when the module is needed in controller.
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## Updates
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### Version 1.1.2-03032021
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1. Fixed an issue that may cause conflicts with ActiveRecord.
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### Version 1.1.1-03022021
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1. Fixed
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1. Fixed an issue when calculating Poisson cutoff for minority mutations `ViralSeq::SeqHash.pm`.
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2. fixed an issue loading class 'OptionParser'in some ruby environments.
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### Version 1.1.0-11112020:
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data/lib/viral_seq/enumerable.rb
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# array = [1,2,3,4,5,6,7,8,9,10]
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# array.median
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# => 5.5
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# @example sum
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# array = [1,2,3,4,5,6,7,8,9,10]
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# array.sum
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# => 55
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# @example average number (mean)
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# array = [1,2,3,4,5,6,7,8,9,10]
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# array.mean
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@@ -45,12 +41,6 @@ module Enumerable
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len % 2 == 1 ? sorted[len/2] : (sorted[len/2 - 1] + sorted[len/2]).to_f / 2
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end
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# generate summed value
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# @return [Numeric] summed value
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def sum
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self.inject(0){|accum, i| accum + i }
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end
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# generate mean number
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# @return [Float] mean value
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def mean
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data/lib/viral_seq/version.rb
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metadata
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--- !ruby/object:Gem::Specification
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name: viral_seq
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version: !ruby/object:Gem::Version
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version: 1.0.
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version: 1.0.12
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platform: ruby
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authors:
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- Shuntai Zhou
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autorequire:
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bindir: bin
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cert_chain: []
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date: 2021-03-
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date: 2021-03-04 00:00:00.000000000 Z
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dependencies:
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- !ruby/object:Gem::Dependency
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name: bundler
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