umappp 0.1.4 → 0.1.5

Sign up to get free protection for your applications and to get access to all the features.
checksums.yaml CHANGED
@@ -1,7 +1,7 @@
1
1
  ---
2
2
  SHA256:
3
- metadata.gz: fde6f3e2f4fc7014e87ddd4cdcb5fefe60d14e34364682a667436373293ec86e
4
- data.tar.gz: aecbfebfbaa5181eeb6572cb27e8cd5621d52bb2b7912ffbdc786eada4e8d8c0
3
+ metadata.gz: cc70f43249cb1993d3fdb810a0cc542e9da383c113f3119414c43723e613ccf0
4
+ data.tar.gz: ec95857557261b5d1aa066dae830ffb7648e7758dd50a96c14af5332a2563e9f
5
5
  SHA512:
6
- metadata.gz: 21a24bf715c70961237d428679e7e2bd2b090843275ec989251645ef7b2cb579f6a130ae5a46cfedbcf34d25b72f6db9a41032dc0d7df39c62e93d39c5e36e2a
7
- data.tar.gz: 5006adc1daa306597e2bfe961a6cbdc9bcf6a291d24bad200766551c8cf2f15b4096e544758da1040c0d0e46c7b6840cca58c1df3facc372000588e3c9a6da4c
6
+ metadata.gz: b0d0be70caca251226572ae920adab0938451383a90444235ffd939ad23e58c73034cdce95fa4639d26da9f5517453f0aa2b78fcb8d254d03685726b55ceb10d
7
+ data.tar.gz: 4cebd1fb124c6d61bf083af58283f75a9e6a714c2ad4425a2c72871fa1bee579bb7377859691187ecfb6f845d6e2b8d4bb670e1837813fe7e6dbb33975aa2c70
data/README.md CHANGED
@@ -28,10 +28,12 @@ gem install umappp
28
28
  This Gem provides the module `Umappp` and its singular method `Umappp.run()`. The first argument of `Umappp.run()` is a two-dimensional Ruby array or a two-dimensional Numo array. [Numo](https://github.com/ruby-numo/numo-narray) is a library for performing N-dimensional array computing like NumPy. The argument is converted to `Numo::SFloat`. SFloat is a single precision floating point number type of Numo::NArray.
29
29
 
30
30
  ```ruby
31
- Umappp.run(embedding) # embedding is two-dimensional Ruby array or Numo array
31
+ # The embedding is two-dimensional Ruby array or Numo array
32
+ # Returns Numo::SFloat
33
+ r = Umappp.run(embedding)
32
34
 
33
- # with parameters
34
- Umappp.run(pixels, num_threads: 8, a: 1.8956, b: 0.8006)
35
+ # Run with parameters
36
+ r = Umappp.run(pixels, num_threads: 8, a: 1.8956, b: 0.8006)
35
37
  ```
36
38
 
37
39
  Available parameters and their default values
@@ -1,5 +1,5 @@
1
1
  # frozen_string_literal: true
2
2
 
3
3
  module Umappp
4
- VERSION = "0.1.4"
4
+ VERSION = "0.1.5"
5
5
  end
data/lib/umappp.rb CHANGED
@@ -37,6 +37,7 @@ module Umappp
37
37
  # @param seed [Integer]
38
38
  # @param batch [Boolean]
39
39
  # @param num_threads [Integer]
40
+ # @return [Numo::SFloat] the final embedding
40
41
 
41
42
  def self.run(embedding, method: :annoy, ndim: 2, tick: 0, **params)
42
43
  unless (u = (params.keys - default_parameters.keys)).empty?
@@ -1,6 +1,9 @@
1
1
  #ifndef UMAPPP_NEIGHBOR_LIST_HPP
2
2
  #define UMAPPP_NEIGHBOR_LIST_HPP
3
3
 
4
+ #include <utility>
5
+ #include <vector>
6
+
4
7
  /**
5
8
  * @file NeighborList.hpp
6
9
  *
@@ -38,7 +38,7 @@ enum InitMethod { SPECTRAL, SPECTRAL_ONLY, RANDOM, NONE };
38
38
  /**
39
39
  * @cond
40
40
  */
41
- int choose_num_epochs(int num_epochs, size_t size) {
41
+ inline int choose_num_epochs(int num_epochs, size_t size) {
42
42
  if (num_epochs < 0) {
43
43
  // Choosing the number of epochs. We use a simple formula to decrease
44
44
  // the number of epochs with increasing size, with the aim being that
metadata CHANGED
@@ -1,14 +1,14 @@
1
1
  --- !ruby/object:Gem::Specification
2
2
  name: umappp
3
3
  version: !ruby/object:Gem::Version
4
- version: 0.1.4
4
+ version: 0.1.5
5
5
  platform: ruby
6
6
  authors:
7
7
  - kojix2
8
8
  autorequire:
9
9
  bindir: bin
10
10
  cert_chain: []
11
- date: 2022-10-12 00:00:00.000000000 Z
11
+ date: 2022-11-02 00:00:00.000000000 Z
12
12
  dependencies:
13
13
  - !ruby/object:Gem::Dependency
14
14
  name: numo-narray