trinitycrmod 0.3.11 → 0.3.12
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- checksums.yaml +4 -4
- data/VERSION +1 -1
- data/lib/trinitycrmod/trinity.rb +38 -0
- data/trinitycrmod.gemspec +2 -2
- metadata +1 -1
checksums.yaml
CHANGED
@@ -1,7 +1,7 @@
|
|
1
1
|
---
|
2
2
|
SHA1:
|
3
|
-
metadata.gz:
|
4
|
-
data.tar.gz:
|
3
|
+
metadata.gz: a84258c4e74cbad84b2cd657f8aea092d9cc7bf4
|
4
|
+
data.tar.gz: f1a9bec20a809cf64c63ad0a808edb6ae931e4da
|
5
5
|
SHA512:
|
6
|
-
metadata.gz:
|
7
|
-
data.tar.gz:
|
6
|
+
metadata.gz: 14b7f43998e0d4707f6e77a929bcca7395f54a464740b5402c5e5e49a575b4e690e11bc5b6b71f4cea90bba67f1950e7ea68b1c1e34ef4f0a22e5721f7778f14
|
7
|
+
data.tar.gz: 687755340f32f4cc6e59925f338c227c400aa20ed4709f39ebf68023d18a1c558a46306eee2c600cb8fe34b79dcbddb56471867945dcdd2b81a1b5968c362243
|
data/VERSION
CHANGED
@@ -1 +1 @@
|
|
1
|
-
0.3.
|
1
|
+
0.3.12
|
data/lib/trinitycrmod/trinity.rb
CHANGED
@@ -18,6 +18,7 @@ class CodeRunner
|
|
18
18
|
|
19
19
|
# Use the Run::FortranNamelist tools to process the variable database
|
20
20
|
setup_namelists(@code_module_folder)
|
21
|
+
@variables += [:flux_pars]
|
21
22
|
require 'trinitycrmod/output_files'
|
22
23
|
require 'trinitycrmod/graphs'
|
23
24
|
require 'trinitycrmod/trinity_gs2'
|
@@ -95,6 +96,43 @@ class CodeRunner
|
|
95
96
|
end
|
96
97
|
|
97
98
|
|
99
|
+
# Update submission parameters in the normal way then deal with parameters
|
100
|
+
# for the flux code. Each flux code will behave differently.
|
101
|
+
#
|
102
|
+
# * Gs2
|
103
|
+
# flux_pars: {nx: 43, delt: {1=> 0.01, 2=>0.05}}
|
104
|
+
# will set nx for all runs to be 43, and delt for run 1 to 0.01, delt
|
105
|
+
# for run 2 to be 0.05
|
106
|
+
def update_submission_parameters(parameters, start_from_defaults=true)
|
107
|
+
super(parameters, start_from_defaults)
|
108
|
+
if @flux_pars
|
109
|
+
@flux_pars.each do |par, val|
|
110
|
+
if @flux_option == "gs2"
|
111
|
+
if val.kind_of? Hash
|
112
|
+
val.each{|n,v| gs2_runs[n].set(par, v)}
|
113
|
+
else
|
114
|
+
gs2_runs.each{|r| r.set(par, val)}
|
115
|
+
end
|
116
|
+
end
|
117
|
+
end
|
118
|
+
end
|
119
|
+
self
|
120
|
+
end
|
121
|
+
|
122
|
+
# Override CodeRunner::Run method to deal with flux_pars properly
|
123
|
+
# when generating run_name
|
124
|
+
def generate_run_name
|
125
|
+
@run_name = %[v#@version] + @naming_pars.inject("") do |str, par|
|
126
|
+
case par
|
127
|
+
when :flux_pars
|
128
|
+
str+="_flx_#{send(par).map{|k,v| "#{k}_#{v.to_s[0..8]}"}.join("_")}}"
|
129
|
+
else
|
130
|
+
str+="_#{par}_#{send(par).to_s[0...8]}"
|
131
|
+
end
|
132
|
+
end
|
133
|
+
@run_name = @run_name.gsub(/\s+/, "_").gsub(/[\/{}]/, '') + "_id_#@id"
|
134
|
+
end
|
135
|
+
|
98
136
|
# The number of separate flux tube results needed for the jacobian
|
99
137
|
def n_flux_tubes
|
100
138
|
d1 = dflx_stencil_actual - 1
|
data/trinitycrmod.gemspec
CHANGED
@@ -2,11 +2,11 @@
|
|
2
2
|
# DO NOT EDIT THIS FILE DIRECTLY
|
3
3
|
# Instead, edit Jeweler::Tasks in Rakefile, and run 'rake gemspec'
|
4
4
|
# -*- encoding: utf-8 -*-
|
5
|
-
# stub: trinitycrmod 0.3.
|
5
|
+
# stub: trinitycrmod 0.3.12 ruby lib
|
6
6
|
|
7
7
|
Gem::Specification.new do |s|
|
8
8
|
s.name = "trinitycrmod"
|
9
|
-
s.version = "0.3.
|
9
|
+
s.version = "0.3.12"
|
10
10
|
|
11
11
|
s.required_rubygems_version = Gem::Requirement.new(">= 0") if s.respond_to? :required_rubygems_version=
|
12
12
|
s.require_paths = ["lib"]
|