transrate 0.0.3 → 0.0.4

data/lib/transrate/transrater.rb

@@ -4,7 +4,7 @@ module Transrate
 
     def initialize assembly, reference, left, right, insertsize=nil, insertsd=nil
       @assembly = Assembly.new assembly
-      @reference = Assembly.new reference
+      @reference = reference.is_a?(Assembly) ? reference : Assembly.new reference
       @read_metrics = ReadMetrics.new @assembly
       @comparative_metrics = ComparativeMetrics.new(@assembly, @reference)
       self.run(left, right, insertsize, insertsd)

data/lib/transrate/version.rb

@@ -4,7 +4,7 @@ module Transrate
   module VERSION
     MAJOR = 0
     MINOR = 0
-    PATCH = 3
+    PATCH = 4
     BUILD = nil
 
     STRING = [MAJOR, MINOR, PATCH, BUILD].compact.join('.')

metadata

@@ -1,7 +1,7 @@
 --- !ruby/object:Gem::Specification
 name: transrate
 version: !ruby/object:Gem::Version
-  version: 0.0.3
+  version: 0.0.4
   prerelease: 
 platform: ruby
 authors: