tnql 1.1.0 → 1.1.1
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- checksums.yaml +4 -4
- data/CHANGELOG.md +7 -1
- data/LICENSE.txt +1 -1
- data/README.md +3 -3
- data/lib/tnql/version.rb +1 -1
- metadata +48 -56
- data/.github/CODEOWNERS +0 -2
- data/.github/workflows/lint.yml +0 -23
- data/.github/workflows/test.yml +0 -71
- data/.gitignore +0 -11
- data/.hound.yml +0 -10
- data/.rubocop.yml +0 -1
- data/Gemfile +0 -4
- data/Guardfile +0 -15
- data/bin/console +0 -10
- data/bin/setup +0 -7
- data/code_safety.yml +0 -292
- data/gemfiles/Gemfile.rails52 +0 -5
- data/gemfiles/Gemfile.rails60 +0 -5
- data/tnql.gemspec +0 -41
checksums.yaml
CHANGED
@@ -1,7 +1,7 @@
|
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1
1
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---
|
2
2
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SHA256:
|
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-
metadata.gz:
|
4
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-
data.tar.gz:
|
3
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+
metadata.gz: 5e7fe1a52c8dd14cff3661003715b53dac3d454d7e95d6dff273d58d55da8773
|
4
|
+
data.tar.gz: 042eb326a98fba15bd0bdd92de8360aaac1ab8b7c010a9a9907a64deefd23720
|
5
5
|
SHA512:
|
6
|
-
metadata.gz:
|
7
|
-
data.tar.gz:
|
6
|
+
metadata.gz: 5e1b1e45ad2efb145fa60ba7282ede036e9d69d874fef6e31724f428fa2d90fdc7b61045afd4ef6b93487ceba9c6f861fa8414423c67b705869a50f73c3c50ed
|
7
|
+
data.tar.gz: 4854b60d9c41af4d0b98bb20b39dad440c07de54488c95bef6a1797a242cf0ba1b7f136b19621fe0ebe5bf28b53cdcefa90389220a526bc7ee911ed7622b762a
|
data/CHANGELOG.md
CHANGED
@@ -1,5 +1,11 @@
|
|
1
1
|
## [Unreleased]
|
2
|
-
*
|
2
|
+
* No unreleased changes
|
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+
|
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+
## 1.1.1 / 2022-12-08
|
5
|
+
### Fixed
|
6
|
+
* Drop support for Ruby 2.6
|
7
|
+
* Support Ruby 3.1, Rails 7.0
|
8
|
+
* Replace Public Health England naming with NHS Digital
|
3
9
|
|
4
10
|
## 1.1.0 / 2021-11-25
|
5
11
|
### Added
|
data/LICENSE.txt
CHANGED
data/README.md
CHANGED
@@ -1,6 +1,6 @@
|
|
1
|
-
# TNQL [![Build Status](https://github.com/
|
1
|
+
# TNQL [![Build Status](https://github.com/NHSDigital/tnql/workflows/Test/badge.svg)](https://github.com/NHSDigital/tnql/actions?query=workflow%3Atest) [![Gem Version](https://badge.fury.io/rb/tnql.svg)](https://rubygems.org/gems/tnql)
|
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|
3
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-
Tumour Natural Query Language (TNQL) is a [Treetop](http://treetop.rubyforge.org/) driven Domain Specific Language (DSL) used by the
|
3
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+
Tumour Natural Query Language (TNQL) is a [Treetop](http://treetop.rubyforge.org/) driven Domain Specific Language (DSL) used by the NHS Digital (NHS-D) National Cancer Registration and Analysis Service (NCRAS) to identify cohorts of tumours.
|
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4
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|
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Used for analysis, research and day-to-day operations, it was first created in March 2011 to empower non-technical users to write sophisticated human readable queries without the need to know or understand the underlying datastore and/or schema.
|
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@@ -64,7 +64,7 @@ PLEASE NOTE: A side-effect of decoupling TNQL from the NCRAS SQL adapter is that
|
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## Contributing
|
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|
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-
Bug reports and pull requests are welcome on GitHub at https://github.com/
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Bug reports and pull requests are welcome on GitHub at https://github.com/NHSDigital/tnql.
|
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|
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This project is intended to be a safe, welcoming space for collaboration, and contributors are expected to adhere to the [Contributor Covenant](http://contributor-covenant.org) code of conduct.
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data/lib/tnql/version.rb
CHANGED
metadata
CHANGED
@@ -1,14 +1,14 @@
|
|
1
1
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--- !ruby/object:Gem::Specification
|
2
2
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name: tnql
|
3
3
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version: !ruby/object:Gem::Version
|
4
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-
version: 1.1.
|
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+
version: 1.1.1
|
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platform: ruby
|
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6
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authors:
|
7
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-
-
|
8
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-
autorequire:
|
7
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+
- NHSD NDRS Development Team
|
8
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+
autorequire:
|
9
9
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bindir: exe
|
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10
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cert_chain: []
|
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-
date:
|
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+
date: 2022-12-08 00:00:00.000000000 Z
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dependencies:
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- !ruby/object:Gem::Dependency
|
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name: activesupport
|
@@ -19,7 +19,7 @@ dependencies:
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version: 3.2.18
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- - "<"
|
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- !ruby/object:Gem::Version
|
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-
version: '7'
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+
version: '7.1'
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type: :runtime
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prerelease: false
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version_requirements: !ruby/object:Gem::Requirement
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@@ -29,7 +29,21 @@ dependencies:
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version: 3.2.18
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- - "<"
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- !ruby/object:Gem::Version
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version: '7'
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version: '7.1'
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- !ruby/object:Gem::Dependency
|
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name: chronic
|
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requirement: !ruby/object:Gem::Requirement
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requirements:
|
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+
- - "~>"
|
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- !ruby/object:Gem::Version
|
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+
version: '0.3'
|
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type: :runtime
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prerelease: false
|
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version_requirements: !ruby/object:Gem::Requirement
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requirements:
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- - "~>"
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- !ruby/object:Gem::Version
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version: '0.3'
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- !ruby/object:Gem::Dependency
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name: ndr_support
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requirement: !ruby/object:Gem::Requirement
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@@ -65,35 +79,35 @@ dependencies:
|
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- !ruby/object:Gem::Version
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version: 1.4.10
|
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- !ruby/object:Gem::Dependency
|
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name:
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+
name: bundler
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requirement: !ruby/object:Gem::Requirement
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requirements:
|
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-
- - "
|
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+
- - ">="
|
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- !ruby/object:Gem::Version
|
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-
version: '0
|
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-
type: :
|
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+
version: '0'
|
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+
type: :development
|
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prerelease: false
|
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version_requirements: !ruby/object:Gem::Requirement
|
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requirements:
|
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-
- - "
|
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+
- - ">="
|
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- !ruby/object:Gem::Version
|
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|
-
version: '0
|
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|
+
version: '0'
|
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95
|
- !ruby/object:Gem::Dependency
|
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|
-
name:
|
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|
+
name: guard
|
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requirement: !ruby/object:Gem::Requirement
|
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requirements:
|
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-
- - "
|
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+
- - ">="
|
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- !ruby/object:Gem::Version
|
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-
version: '
|
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+
version: '0'
|
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type: :development
|
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prerelease: false
|
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version_requirements: !ruby/object:Gem::Requirement
|
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requirements:
|
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-
- - "
|
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+
- - ">="
|
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- !ruby/object:Gem::Version
|
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-
version: '
|
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+
version: '0'
|
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- !ruby/object:Gem::Dependency
|
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name:
|
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name: guard-minitest
|
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requirement: !ruby/object:Gem::Requirement
|
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requirements:
|
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- - ">="
|
@@ -107,7 +121,7 @@ dependencies:
|
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- !ruby/object:Gem::Version
|
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version: '0'
|
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- !ruby/object:Gem::Dependency
|
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|
-
name:
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name: guard-rubocop
|
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requirement: !ruby/object:Gem::Requirement
|
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requirements:
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- - ">="
|
@@ -135,35 +149,27 @@ dependencies:
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- !ruby/object:Gem::Version
|
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version: 5.0.0
|
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- !ruby/object:Gem::Dependency
|
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name:
|
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name: ndr_dev_support
|
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requirement: !ruby/object:Gem::Requirement
|
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requirements:
|
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- - ">="
|
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- !ruby/object:Gem::Version
|
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-
version: '0'
|
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-
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prerelease: false
|
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version_requirements: !ruby/object:Gem::Requirement
|
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requirements:
|
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-
- - ">="
|
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-
- !ruby/object:Gem::Version
|
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version: '0'
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- !ruby/object:Gem::Dependency
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name: guard
|
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requirement: !ruby/object:Gem::Requirement
|
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requirements:
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-
- - ">="
|
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version: '6.0'
|
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+
- - "<"
|
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- !ruby/object:Gem::Version
|
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-
version: '0'
|
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version: '8.0'
|
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type: :development
|
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prerelease: false
|
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version_requirements: !ruby/object:Gem::Requirement
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requirements:
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- - ">="
|
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- !ruby/object:Gem::Version
|
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-
version: '0'
|
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+
version: '6.0'
|
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+
- - "<"
|
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+
- !ruby/object:Gem::Version
|
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+
version: '8.0'
|
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- !ruby/object:Gem::Dependency
|
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|
-
name:
|
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name: pry
|
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requirement: !ruby/object:Gem::Requirement
|
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requirements:
|
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- - ">="
|
@@ -177,7 +183,7 @@ dependencies:
|
|
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- !ruby/object:Gem::Version
|
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version: '0'
|
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- !ruby/object:Gem::Dependency
|
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-
name:
|
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+
name: rake
|
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requirement: !ruby/object:Gem::Requirement
|
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requirements:
|
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- - ">="
|
@@ -210,24 +216,11 @@ executables: []
|
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extensions: []
|
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extra_rdoc_files: []
|
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files:
|
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|
-
- ".github/CODEOWNERS"
|
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-
- ".github/workflows/lint.yml"
|
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- ".github/workflows/test.yml"
|
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-
- ".gitignore"
|
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-
- ".hound.yml"
|
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-
- ".rubocop.yml"
|
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- CHANGELOG.md
|
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- CODE_OF_CONDUCT.md
|
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-
- Gemfile
|
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-
- Guardfile
|
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- LICENSE.txt
|
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- README.md
|
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- Rakefile
|
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-
- bin/console
|
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-
- bin/setup
|
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-
- code_safety.yml
|
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-
- gemfiles/Gemfile.rails52
|
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-
- gemfiles/Gemfile.rails60
|
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224
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- lib/tnql.rb
|
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- lib/tnql/constants.rb
|
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- lib/tnql/grammars.rb
|
@@ -263,12 +256,11 @@ files:
|
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- lib/tnql/parser.rb
|
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- lib/tnql/treetop/extensions.rb
|
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- lib/tnql/version.rb
|
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|
-
|
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homepage: https://github.com/PublicHealthEngland/tnql
|
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homepage: https://github.com/NHSDigital/tnql
|
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licenses:
|
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- MIT
|
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metadata: {}
|
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post_install_message:
|
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post_install_message:
|
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rdoc_options: []
|
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require_paths:
|
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- lib
|
@@ -276,15 +268,15 @@ required_ruby_version: !ruby/object:Gem::Requirement
|
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requirements:
|
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- - ">="
|
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- !ruby/object:Gem::Version
|
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version: '2.
|
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version: '2.7'
|
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required_rubygems_version: !ruby/object:Gem::Requirement
|
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requirements:
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- - ">="
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- !ruby/object:Gem::Version
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version: '0'
|
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requirements: []
|
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rubygems_version: 3.
|
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signing_key:
|
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rubygems_version: 3.2.33
|
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signing_key:
|
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specification_version: 4
|
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summary: Tumour Natural Query Language
|
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test_files: []
|
data/.github/CODEOWNERS
DELETED
data/.github/workflows/lint.yml
DELETED
@@ -1,23 +0,0 @@
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name: Lint
|
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-
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on: [pull_request]
|
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-
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jobs:
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rubocop:
|
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name: RuboCop
|
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-
|
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runs-on: ubuntu-latest
|
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-
|
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steps:
|
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- uses: actions/checkout@v2
|
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with:
|
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fetch-depth: 0 # fetch everything
|
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- name: Set up Ruby
|
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uses: ruby/setup-ruby@v1
|
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with:
|
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ruby-version: 3.0
|
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-
- name: Install dependencies
|
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|
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run: bundle install
|
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- name: Run RuboCop against BASE..HEAD changes
|
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|
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run: bundle exec rake rubocop:diff origin/${GITHUB_BASE_REF#*/}
|
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|
-
|
data/.github/workflows/test.yml
DELETED
@@ -1,71 +0,0 @@
|
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name: Test
|
2
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-
|
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on: [push]
|
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-
|
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jobs:
|
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test:
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strategy:
|
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matrix:
|
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ruby-version:
|
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- 2.6
|
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-
- 2.7
|
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- 3.0
|
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gemfile:
|
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|
-
- gemfiles/Gemfile.rails52
|
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|
-
- gemfiles/Gemfile.rails60
|
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|
-
|
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name: Ruby ${{ matrix.ruby-version }} / Bundle ${{ matrix.gemfile }}
|
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-
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runs-on: ubuntu-latest
|
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-
|
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env:
|
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BUNDLE_GEMFILE: ${{ matrix.gemfile }}
|
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|
-
|
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steps:
|
25
|
-
- uses: actions/checkout@v2
|
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- name: Set up Ruby
|
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|
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uses: ruby/setup-ruby@v1
|
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|
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with:
|
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ruby-version: ${{ matrix.ruby-version }}
|
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- name: Install dependencies
|
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run: bundle install
|
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-
- name: Run tests
|
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run: bundle exec rake
|
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|
-
|
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|
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# A utility job upon which Branch Protection can depend,
|
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|
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# thus remaining agnostic of the matrix.
|
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|
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test_matrix:
|
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|
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if: ${{ always() }}
|
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|
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runs-on: ubuntu-latest
|
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|
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name: Matrix
|
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|
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needs: test
|
42
|
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steps:
|
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|
-
- name: Check build matrix status
|
44
|
-
if: ${{ needs.test.result != 'success' }}
|
45
|
-
run: exit 1
|
46
|
-
|
47
|
-
notify:
|
48
|
-
# Run only on master, but regardless of whether tests past:
|
49
|
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if: ${{ always() && github.ref == 'refs/heads/master' }}
|
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|
-
|
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|
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needs: test_matrix
|
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|
-
|
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|
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runs-on: ubuntu-latest
|
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|
-
|
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|
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steps:
|
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|
-
- uses: 8398a7/action-slack@v3
|
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|
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with:
|
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|
-
status: custom
|
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|
-
fields: workflow,commit,author
|
60
|
-
custom_payload: |
|
61
|
-
{
|
62
|
-
channel: 'C7FQWGDHP',
|
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|
-
username: 'CI – ' + '${{ github.repository }}'.split('/')[1],
|
64
|
-
icon_emoji: ':hammer_and_wrench:',
|
65
|
-
attachments: [{
|
66
|
-
color: '${{ needs.test_matrix.result }}' === 'success' ? 'good' : '${{ needs.test_matrix.result }}' === 'failure' ? 'danger' : 'warning',
|
67
|
-
text: `${process.env.AS_WORKFLOW} against \`${{ github.ref }}\` (${process.env.AS_COMMIT}) for ${{ github.actor }} resulted in *${{ needs.test_matrix.result }}*.`
|
68
|
-
}]
|
69
|
-
}
|
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|
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env:
|
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test/tnql_test.rb:
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comments:
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reviewed_by: timgentry
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tnql.gemspec:
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reviewed_by: ollietulloch
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safe_revision: 14e059d904af19a4921a37b2949529b916d19b93
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data/gemfiles/Gemfile.rails52
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data/gemfiles/Gemfile.rails60
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data/tnql.gemspec
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@@ -1,41 +0,0 @@
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# coding: utf-8
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lib = File.expand_path('lib', __dir__)
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$LOAD_PATH.unshift(lib) unless $LOAD_PATH.include?(lib)
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require 'tnql/version'
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Gem::Specification.new do |spec|
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spec.name = 'tnql'
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spec.version = Tnql::VERSION
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spec.authors = ['PHE NDR IT Development Team']
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spec.email = []
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spec.summary = 'Tumour Natural Query Language'
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spec.description = 'Domain Specific Language for querying PHE NCRAS datastores'
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spec.homepage = 'https://github.com/PublicHealthEngland/tnql'
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spec.license = 'MIT'
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spec.files = `git ls-files -z`.split("\x0").
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reject { |f| f.match(%r{^(test|spec|features)/}) }
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# SECURE BNS 2018-08-06: Minimise sharing of (public-key encrypted) slack secrets in .travis.yml
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spec.files -= %w[.travis.yml] # Not needed in the gem
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spec.bindir = 'exe'
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spec.executables = spec.files.grep(%r{^exe/}) { |f| File.basename(f) }
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spec.require_paths = ['lib']
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spec.required_ruby_version = '>= 2.6'
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spec.add_dependency 'activesupport', '>= 3.2.18', '< 7'
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spec.add_dependency 'ndr_support', '>= 3.0', '< 6'
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spec.add_dependency 'treetop', '>= 1.4.10'
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spec.add_dependency 'chronic', '~> 0.3'
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spec.add_development_dependency 'ndr_dev_support', '~> 6.0'
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spec.add_development_dependency 'bundler'
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spec.add_development_dependency 'rake'
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spec.add_development_dependency 'minitest', '>= 5.0.0'
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spec.add_development_dependency 'pry'
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spec.add_development_dependency 'guard'
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spec.add_development_dependency 'guard-rubocop'
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spec.add_development_dependency 'guard-minitest'
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spec.add_development_dependency 'terminal-notifier-guard' if RUBY_PLATFORM =~ /darwin/
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end
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