tao_rdfizer 0.9.1 → 0.9.2

checksums.yaml

@@ -1,7 +1,7 @@
 ---
 SHA1:
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-  data.tar.gz: 0216a19ec23514d036319e1f9125694d50dfb0e9
+  metadata.gz: 7d273692bcd55639734303a562b784a10aa70f33
+  data.tar.gz: 52a38df02c8f7281648fa1fa217495678d94df85
 SHA512:
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+  metadata.gz: 497a10e7db3043f497e9602d204dbbcbb8b11d09261a68d677d6485e98df1a642a772007ab5d877de5de2d8beadce9dd52108c753ddb18568a78bd1f9a55a1b5
+  data.tar.gz: 8dae7f177c792044161dbfce3bc58e5a35bdb2e885d659cf84dec46f2924d67df9c335848e01b71d01d4b51da6ac6687b7bac1d8e28af7847f40dfc416e3706b

data/bin/tao_rdfizer

@@ -5,8 +5,8 @@ require 'json'
 begin
 	annotations = JSON.parse File.read(ARGV[0]), :symbolize_names => true
 	annotations = [annotations] unless annotations.class == Array
-	# mode = :annotations
-	mode = :spans
+	mode = :annotations
+	# mode = :spans
 	rdfizer = TAO::RDFizer.new(mode)
 	puts rdfizer.rdfize(annotations)
 rescue ArgumentError, IOError => e

data/lib/tao_rdfizer/tao_rdfizer.rb

@@ -9,19 +9,14 @@ class TAO::RDFizer
   # if mode == nil then produces both
   def initialize(mode = nil)
   	@mode = mode
-		template_filename = unless mode.nil?
-			if mode == :annotations
-				'view/tao_annotations_ttl.erb'
-			elsif mode == :spans
-				'view/tao_spans_ttl.erb'
-			else
-				'view/tao_ttl.erb'
-			end
+		template = if !mode.nil? && mode == :spans
+			ERB_SPANS_TTL
 		else
-			'view/tao_ttl.erb'
+			ERB_ANNOTATIONS_TTL
 		end
-		@tao_ttl_erb = ERB.new(File.read(template_filename), nil, '-')
-		@prefix_ttl_erb = ERB.new(File.read("view/prefixes_ttl.erb"), nil, '-')
+
+		@tao_ttl_erb = ERB.new(template, nil, '-')
+		@prefix_ttl_erb = ERB.new(ERB_PREFIXES_TTL, nil, '-')
   end
 
 	def rdfize(annotations_col)
@@ -151,6 +146,8 @@ class TAO::RDFizer
 		ttl = @prefix_ttl_erb.result(binding) + @tao_ttl_erb.result(binding)
 	end
 
+	private
+
 	def include_parent?(spans, span)
 		# spans.each{|s| return true if (s[:begin] <= span[:begin] && s[:end] > span[:end]) || (s[:begin] < span[:begin] && s[:end] >= span[:end])}
 		spans.each{|s| return true if s[:begin] <= span[:begin] && s[:end] >= span[:end]}
@@ -180,4 +177,45 @@ class TAO::RDFizer
 			namespaces.has_key?('_base') ? "<#{clabel}>" : "prj:#{clabel}"
 		end
 	end
+
+	ERB_ANNOTATIONS_TTL = <<~HEREDOC
+		<% denotations.each do |d| -%>
+		<%= d[:obj_uri] %> tao:denoted_by <%= d[:span_uri] %> ;
+			rdf:type <%= d[:cls_uri] %> .
+		<% end -%>
+		<%# relations -%>
+		<% relations.each do |r| -%>
+		<%= r[:subj_uri] %> <%= r[:pred_uri] %> <%= r[:obj_uri] %> .
+		<% end -%>
+	HEREDOC
+
+	ERB_SPANS_TTL = <<~HEREDOC
+		<% spans.each do |s| -%>
+		<%= s[:span_uri] %> rdf:type tao:Text_span ;
+			tao:belongs_to <<%= s[:source_uri] %>> ;
+			tao:begins_at <%= s[:begin] %> ;
+			tao:ends_at <%= s[:end] %> ;
+		<% s[:precedings].each do |s| -%>
+			tao:follows <%= s[:span_uri] %> ;
+		<% end -%>
+		<% s[:children].each do |s| -%>
+			tao:contains <%= s[:span_uri] %> ;
+		<% end -%>
+			tao:has_text "<%= s[:text] %>" .
+		<% end -%>
+	HEREDOC
+
+	ERB_PREFIXES_TTL = <<~HEREDOC
+		@prefix rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> .
+		@prefix tao: <http://pubannotation.org/ontology/tao.owl#> .
+		<%# namespaces -%>
+		<% namespaces.each_key do |p| -%>
+		<% if p == '_base' -%>
+		@base <<%= namespaces[p] %>> .
+		<% else -%>
+		@prefix <%= p %>: <<%= namespaces[p] %>> .
+		<% end -%>
+		<% end -%>
+	HEREDOC
+
 end

metadata

@@ -1,7 +1,7 @@
 --- !ruby/object:Gem::Specification
 name: tao_rdfizer
 version: !ruby/object:Gem::Version
-  version: 0.9.1
+  version: 0.9.2
 platform: ruby
 authors:
 - Jin-Dong Kim
@@ -21,9 +21,6 @@ files:
 - bin/tao_rdfizer
 - lib/tao_rdfizer.rb
 - lib/tao_rdfizer/tao_rdfizer.rb
-- view/prefixes_ttl.erb
-- view/tao_annotations_ttl.erb
-- view/tao_spans_ttl.erb
 homepage: https://github.com/pubannotation/tao_rdfizer
 licenses:
 - MIT

data/view/prefixes_ttl.erb

@@ -1,10 +0,0 @@
-@prefix rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> .
-@prefix tao: <http://pubannotation.org/ontology/tao.owl#> .
-<%# namespaces -%>
-<% namespaces.each_key do |p| -%>
-<% if p == '_base' -%>
-@base <%= "<#{namespaces[p]}>" %> .
-<% else -%>
-@prefix <%= p %>: <%= "<#{namespaces[p]}>" %> .
-<% end -%>
-<% end -%>

data/view/tao_annotations_ttl.erb

@@ -1,9 +0,0 @@
-<%# denotations -%>
-<% denotations.each do |d| -%>
-<%= d[:obj_uri] %> tao:denoted_by <%= d[:span_uri] %> ;
-	rdf:type <%= d[:cls_uri] %> .
-<% end -%>
-<%# relations -%>
-<% relations.each do |r| -%>
-<%= r[:subj_uri] %> <%= r[:pred_uri] %> <%= r[:obj_uri] %> .
-<% end -%>

data/view/tao_spans_ttl.erb

@@ -1,14 +0,0 @@
-<%# spans -%>
-<% spans.each do |s| -%>
-<%= s[:span_uri] %> rdf:type tao:Text_span ;
-	tao:belongs_to <%= "<#{s[:source_uri]}>" %> ;
-	tao:begins_at <%= s[:begin] %> ;
-	tao:ends_at <%= s[:end] %> ;
-<% s[:precedings].each do |s| -%>
-	tao:follows <%= s[:span_uri] %> ;
-<% end -%>
-<% s[:children].each do |s| -%>
-	tao:contains <%= s[:span_uri] %> ;
-<% end -%>
-	tao:has_text "<%= s[:text] %>" .
-<% end -%>