t_nn 0.0.1

checksums.yaml

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data/.gitignore

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+/.bundle/
+/.yardoc
+/Gemfile.lock
+/_yardoc/
+/coverage/
+/doc/
+/pkg/
+/spec/reports/
+/tmp/

data/.rspec

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+--format documentation
+--color

data/.travis.yml

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+sudo: false
+language: ruby
+rvm:
+  - 2.3.0
+before_install: gem install bundler -v 1.13.1

data/CODE_OF_CONDUCT.md

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+# Contributor Covenant Code of Conduct
+
+## Our Pledge
+
+In the interest of fostering an open and welcoming environment, we as
+contributors and maintainers pledge to making participation in our project and
+our community a harassment-free experience for everyone, regardless of age, body
+size, disability, ethnicity, gender identity and expression, level of experience,
+nationality, personal appearance, race, religion, or sexual identity and
+orientation.
+
+## Our Standards
+
+Examples of behavior that contributes to creating a positive environment
+include:
+
+* Using welcoming and inclusive language
+* Being respectful of differing viewpoints and experiences
+* Gracefully accepting constructive criticism
+* Focusing on what is best for the community
+* Showing empathy towards other community members
+
+Examples of unacceptable behavior by participants include:
+
+* The use of sexualized language or imagery and unwelcome sexual attention or
+advances
+* Trolling, insulting/derogatory comments, and personal or political attacks
+* Public or private harassment
+* Publishing others' private information, such as a physical or electronic
+  address, without explicit permission
+* Other conduct which could reasonably be considered inappropriate in a
+  professional setting
+
+## Our Responsibilities
+
+Project maintainers are responsible for clarifying the standards of acceptable
+behavior and are expected to take appropriate and fair corrective action in
+response to any instances of unacceptable behavior.
+
+Project maintainers have the right and responsibility to remove, edit, or
+reject comments, commits, code, wiki edits, issues, and other contributions
+that are not aligned to this Code of Conduct, or to ban temporarily or
+permanently any contributor for other behaviors that they deem inappropriate,
+threatening, offensive, or harmful.
+
+## Scope
+
+This Code of Conduct applies both within project spaces and in public spaces
+when an individual is representing the project or its community. Examples of
+representing a project or community include using an official project e-mail
+address, posting via an official social media account, or acting as an appointed
+representative at an online or offline event. Representation of a project may be
+further defined and clarified by project maintainers.
+
+## Enforcement
+
+Instances of abusive, harassing, or otherwise unacceptable behavior may be
+reported by contacting the project team at okano565656@gmail.com. All
+complaints will be reviewed and investigated and will result in a response that
+is deemed necessary and appropriate to the circumstances. The project team is
+obligated to maintain confidentiality with regard to the reporter of an incident.
+Further details of specific enforcement policies may be posted separately.
+
+Project maintainers who do not follow or enforce the Code of Conduct in good
+faith may face temporary or permanent repercussions as determined by other
+members of the project's leadership.
+
+## Attribution
+
+This Code of Conduct is adapted from the [Contributor Covenant][homepage], version 1.4,
+available at [http://contributor-covenant.org/version/1/4][version]
+
+[homepage]: http://contributor-covenant.org
+[version]: http://contributor-covenant.org/version/1/4/

data/Gemfile

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+source 'https://rubygems.org'
+
+# Specify your gem's dependencies in t_nn.gemspec
+gemspec

data/LICENSE.txt

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+The MIT License (MIT)
+
+Copyright (c) 2017 tcom
+
+Permission is hereby granted, free of charge, to any person obtaining a copy
+of this software and associated documentation files (the "Software"), to deal
+in the Software without restriction, including without limitation the rights
+to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
+copies of the Software, and to permit persons to whom the Software is
+furnished to do so, subject to the following conditions:
+
+The above copyright notice and this permission notice shall be included in
+all copies or substantial portions of the Software.
+
+THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
+IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
+FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
+AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
+LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
+OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN
+THE SOFTWARE.

data/README.md

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+# TNn
+
+Welcome to your new gem! In this directory, you'll find the files you need to be able to package up your Ruby library into a gem. Put your Ruby code in the file `lib/t_nn`. To experiment with that code, run `bin/console` for an interactive prompt.
+
+TODO: Delete this and the text above, and describe your gem
+
+## Installation
+
+Add this line to your application's Gemfile:
+
+```ruby
+gem 't_nn'
+```
+
+And then execute:
+
+    $ bundle
+
+Or install it yourself as:
+
+    $ gem install t_nn
+
+## Usage
+### simple feedforward_neural_network
+respect for keras.
+
+``` ruby
+
+require "t_nn"
+
+model = TNN::FeedForwardNeuralNetwork.new(learning_rate=0.1)
+
+model.add_layer(node_num=2)
+model.add_layer(node_num=3)
+model.add_layer(node_num=1)
+
+x_train = [[0.0, 0.0],[0.0, 1.0], [1.0, 0.0], [1.0, 1.0]]
+y_train = [[ 0.0 ], [ 1.0 ],[ 1.0 ],[ 0.0 ]]
+model.fit(x_train, y_train, epoch=50000)
+
+x_test = x_train
+y_test = y_train
+
+err_rate = model.evaluate(x_test, y_test)
+
+puts "err rate: #{err_rate}%"
+
+# p x_test[0]
+# model.propagation(x_text[0])
+# puts model.get_output_layer[1].w
+
+```
+
+### result
+.... 
+
+```
+
+x [0.0,  0.0],  y [0.0] ,  output [0.03286460161620565]
+x [0.0,  1.0],  y [1.0] ,  output [0.9733866321804969]
+x [1.0,  0.0],  y [1.0] ,  output [0.9731963536942299]
+x [1.0,  1.0],  y [0.0] ,  output [0.014481150692655216]
+err rate: 2.5190691608533524%
+
+```
+
+
+### hop filed net
+sample
+``` ruby
+
+require "t_nn"
+
+data = [1.0, 1.0, -1.0, -1.0, 1.0]  # teacher data
+hop_field_net = TNN::HopFieldNetwork.new(0.0, data)
+hop_field_net.memorize
+noisedData = TNN.add_noise_data(data, 0.0) # make test data
+puts "======[before]======"
+puts "#{TNN.evaluate(data, noisedData)}%"
+hop_field_net.remember(noisedData)
+puts "======[after]======"
+puts "#{ TNN.evaluate(data,hop_field_net.nodes) }%" 
+
+```
+
+## Development
+
+After checking out the repo, run `bin/setup` to install dependencies. Then, run `rake spec` to run the tests. You can also run `bin/console` for an interactive prompt that will allow you to experiment.
+
+To install this gem onto your local machine, run `bundle exec rake install`. To release a new version, update the version number in `version.rb`, and then run `bundle exec rake release`, which will create a git tag for the version, push git commits and tags, and push the `.gem` file to [rubygems.org](https://rubygems.org).
+
+## Contributing
+
+Bug reports and pull requests are welcome on GitHub at https://github.com/[USERNAME]/t_nn. This project is intended to be a safe, welcoming space for collaboration, and contributors are expected to adhere to the [Contributor Covenant](http://contributor-covenant.org) code of conduct.
+
+
+## License
+
+The gem is available as open source under the terms of the [MIT License](http://opensource.org/licenses/MIT).
+

data/Rakefile

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+require "bundler/gem_tasks"
+require "rspec/core/rake_task"
+
+RSpec::Core::RakeTask.new(:spec)
+
+task :default => :spec

data/bin/console

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+#!/usr/bin/env ruby
+
+require "bundler/setup"
+require "t_nn"
+
+# You can add fixtures and/or initialization code here to make experimenting
+# with your gem easier. You can also use a different console, if you like.
+
+# (If you use this, don't forget to add pry to your Gemfile!)
+# require "pry"
+# Pry.start
+
+require "irb"
+IRB.start

data/bin/setup

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+#!/usr/bin/env bash
+set -euo pipefail
+IFS=$'\n\t'
+set -vx
+
+bundle install
+
+# Do any other automated setup that you need to do here

data/lib/t_nn/feedforward_neural_network.rb

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+#!/usr/bin/ruby
+# -*- encoding: utf-8 -*-
+
+module TNN
+
+  #
+  # ==
+  #
+  class FeedForwardNeuralNetwork
+    attr_accessor :layer_list, :layer_size, :link_list, :node_id, :learning_rate, :err_list, :threshold
+    def initialize(learning_rate=0.1, threshold=0.0)
+      @layer_size = 0    #layer iterator
+      @layer_list = Array.new
+      @link_list = Hash.new
+      @node_id = 0
+      @learning_rate = learning_rate
+      @err_list = Array.new
+      @threshold = threshold
+    end
+
+    def add_layer(node_num)
+      node_list = Array.new()
+      node_num.times do |num|
+        node = Node.new(0.0,"sig", @threshold)
+        node.set_id(@node_id)
+        node_list.push(node)
+        @node_id += 1
+      end
+
+      @layer_list.push(node_list)
+      # connect link
+      if @layer_size != 0  # if not first layer
+        # connect link to @layer_size - 1 layer
+        connect_nodes
+      end
+      @layer_size += 1
+    end
+
+    #
+    # === connect_nodes
+    # 
+    def connect_nodes
+      @layer_list[@layer_size - 1].each do |from_node|
+        @layer_list[@layer_size].each do |to_node|
+          @link_list["#{from_node.id}_#{to_node.id}"] = rand(-1.0...1.0)
+        end
+      end
+    end
+
+    #
+    # === 
+    #
+    # @param x_train Array
+    # @param y_train Array
+    #
+    def fit(x_train, y_train, epoch)
+      # input teacher_datas
+      epoch.times do 
+        epoch_err = 0.0 
+        x_train.zip(y_train).each do |x, y|
+          x, y = x_train.zip(y_train).sample
+          # puts "x #{x}, y #{y}"
+          propagation(x)
+          epoch_err += calc_ave_err(y)
+          back_propagation(y)
+        end
+        @err_list.push(epoch_err)
+      end
+    end
+
+    def propagation(x)
+      # input data 
+      @layer_list[0].each_with_index do |node, i|
+        node.input (x[i])
+      end
+      @layer_size.times do |layer_num|
+        if layer_num != (@layer_size-1)
+          # puts "layernum #{layer_num}"
+          @layer_list[layer_num + 1].each do |to_node|
+            sum_all_from_node = 0.0
+            @layer_list[layer_num].each do |from_node|
+              sum_all_from_node += @link_list["#{from_node.id}_#{to_node.id}"] * from_node.w
+            end
+            to_node.update_w(sum_all_from_node + 1.0)
+          end
+        end
+      end
+    end
+
+    def calc_ave_err(y)
+      sum_err = 0.0
+      @layer_list[@layer_size - 1].each_with_index do |node, i|
+        sum_err += calc_err(node.w,y[i]).abs
+      end
+      ave_err = (sum_err)/y.size
+      return ave_err 
+    end
+
+    
+    #
+    # === 
+    # 
+    # @param y Array teacher_data
+    #
+    def back_propagation(y)
+      delta = {}
+      ( @layer_size - 1).downto(0) do |layer_num|
+        if ( @layer_size - 1) == layer_num   # if output layer
+          @layer_list[layer_num].each_with_index do |output_node, i|
+              delta["#{output_node.id}"] = -1.0 * calc_err(y[i], output_node.w) * output_node.w * (1.0 -output_node.w)
+          end
+        else 
+          @layer_list[layer_num].each do |from_node|
+            # リンクの更新
+            @layer_list[layer_num + 1].each do |to_node|
+              update_weight = -1.0 * @learning_rate * delta["#{to_node.id}"] * from_node.w
+              @link_list["#{from_node.id}_#{to_node.id}"] = @link_list["#{from_node.id}_#{to_node.id}"] + update_weight 
+            end
+            # その層のdeltaの更新
+            delta["#{from_node.id}"] = calc_delta(delta,layer_num, from_node) * from_node.w * (1.0 - from_node.w)
+          end
+        end
+      end
+    end
+
+    def calc_err(teacher_data, w)
+      return (teacher_data -w)
+    end
+
+    def calc_delta(delta,layer_i, from_node)
+      sum = 0.0
+      @layer_list[layer_i+1].each do |to_node|
+        sum += delta["#{to_node.id}"] * @link_list["#{from_node.id}_#{to_node.id}"]
+      end
+      return sum
+    end
+
+    def evaluate(x_test, y_test)
+      # compare teacher_datas and output of nn
+      sum_err = 0.0
+      x_test.zip(y_test).each do |x, y|
+        propagation(x)
+        output = []
+        err = 0.0
+        @layer_list[@layer_size -1].zip(y).each do |o, y_f|
+          output.push(o.w)
+          err += (y_f - o.w).abs
+        end
+        sum_err += (err/y_test[0].size)
+        puts "x #{x}, y #{y} , output #{output}"
+      end 
+      return (sum_err/y_test.size) * 100.0
+      # return 0.0
+    end
+
+    def get_output_layer
+      return @layer_list[@layer_size-1]
+    end
+
+    class Node
+      attr_accessor :w,:active_function, :threshold, :id
+      def initialize(w = 0.0, active_function = "sig", threshold = 0.0)
+        @w = w 
+        @threshold = threshold 
+        @active_function = active_function
+      end
+
+      def set_id(id) 
+        @id = id
+      end
+
+      # it can use input fase
+      def input(w)
+        @w = w
+      end
+
+      def update_w(input)
+        # update by sigmoid
+        @w = sigmoid_fun(input)
+      end
+
+      def sigmoid_fun(x, a=1)
+        return (1.0/(1.0+Math.exp(-1.0 * a * x)))
+      end
+    end
+  end
+end
+
+

data/lib/t_nn/hop_field_network.rb

@@ -0,0 +1,134 @@
+#!/usr/bin/ruby
+# -*- encoding: utf-8 -*-
+
+
+module TNN
+  class HopFieldNetwork
+    attr_accessor :net,:train_datas,:threshold ,:nodes,:dim,:is_train
+
+    def initialize(threshold=nil, data)
+      if threshold == nil
+        @threshold = 0.0
+      else
+        @threshold = threshold
+      end
+      @train_datas=Array.new 
+      load_train_data(data)
+      @nodes = Array.new(@train_datas[0].length, 1.0)
+      @dim = @train_datas[0].length
+      @net = Array.new(@dim**2,0.0) 
+
+    end
+
+    def memorize
+      @nodes.length.times do |node_id|
+        @nodes.length.times do |node2_id|
+          sum = 0.0 
+          @train_datas.each do |train_data|
+            sum += train_data[node_id] * train_data[node2_id] if(node_id != node2_id)
+          end
+          @net[node_id * @dim + node2_id] = sum
+          @net[node2_id*@dim + node_id] = sum
+        end
+      end
+    end
+
+    #
+    # ===
+    #
+    # @param [Array] datas datas which has noise
+    #
+    def remember(datas)
+      @nodes = datas
+      e = energy
+      loop do
+        @nodes.each_with_index do |node,node_id|
+          internal_w = calc_connected_factor(node_id) 
+          update_external_w(node_id,internal_w)
+        end
+        new_e = energy
+        break if (e == new_e)
+        e = new_e
+      end
+      puts "energy : #{energy}"
+    end 
+
+    def calc_connected_factor(target_node_id)
+      sum = 0.0
+      @nodes.each_with_index do |node,node_id|
+        sum += @net[target_node_id*@dim + node_id] * node if (target_node_id != node_id )
+      end
+      return sum
+    end
+
+    def update_external_w(node_id,i_w)
+      if i_w >= @threshold
+        @nodes[node_id] = 1.0
+      else
+        @nodes[node_id] = -1.0
+      end
+    end
+
+    #
+    # calc energy function
+    #
+    def energy
+      sum = 0.0
+      @nodes.each_with_index do |node,node_id|
+        @nodes.each_with_index do |node2,node2_id|
+          sum += @net[node2_id*@dim + node_id] * node * node2 if ( node != node2)
+        end
+      end
+      sum2 = 0.0 
+      @nodes.each do |node|
+        sum2 += @threshold * node 
+      end
+
+      result = (-1.0/2.0)*sum + sum2
+      return result
+    end
+
+
+    def load_train_data(data)
+      @train_datas.push(data)
+    end
+
+  end
+
+  #
+  # === add noise to sample datas
+  # @param data Array data which we want to add noise
+  # @param noise_rate float rate of noise
+  #
+  def TNN.add_noise_data(data,noise_rate)
+    data_with_noise = Marshal.load(Marshal.dump(data))
+    data.size.times do |n|
+      if rand <= noise_rate
+        if data_with_noise[n] == -1.0
+          data_with_noise[n] = 1.0
+        else
+          data_with_noise[n] = -1.0
+        end
+      end
+    end
+
+    return data_with_noise
+  end
+
+  #
+  # === evaluate predict data with teatcher data
+  #
+  def TNN.evaluate(teacher_data,data)
+    dominator = 0.0
+    molecule = 0.0 
+    teacher_data.zip(data).each do |td,d|
+      dominator += 1 
+      molecule += 1 if td == d
+    end
+
+    return (molecule/dominator)*100
+  end
+
+end
+
+

data/lib/t_nn/version.rb

@@ -0,0 +1,3 @@
+module TNn
+  VERSION = "0.0.1"
+end

data/lib/t_nn.rb

@@ -0,0 +1,7 @@
+require "t_nn/version"
+require "t_nn/feedforward_neural_network"
+require "t_nn/hop_field_network"
+
+module TNn
+  # Your code goes here...
+end

data/t_nn.gemspec

@@ -0,0 +1,36 @@
+# coding: utf-8
+lib = File.expand_path('../lib', __FILE__)
+$LOAD_PATH.unshift(lib) unless $LOAD_PATH.include?(lib)
+require 't_nn/version'
+
+Gem::Specification.new do |spec|
+  spec.name          = "t_nn"
+  spec.version       = TNn::VERSION
+  spec.authors       = ["tcom"]
+  spec.email         = ["okano565656@gmail.com"]
+
+  spec.summary       = %q{my nn lib}
+  spec.description   = %q{my nn lib}
+  spec.homepage      = "https://github.com/Tcom242242/t_nn"
+  spec.license       = "MIT"
+
+  # Prevent pushing this gem to RubyGems.org. To allow pushes either set the 'allowed_push_host'
+  # to allow pushing to a single host or delete this section to allow pushing to any host.
+  if spec.respond_to?(:metadata)
+    # spec.metadata['allowed_push_host'] = "TODO: Set to 'http://mygemserver.com'"
+  else
+    raise "RubyGems 2.0 or newer is required to protect against " \
+      "public gem pushes."
+  end
+
+  spec.files         = `git ls-files -z`.split("\x0").reject do |f|
+    f.match(%r{^(test|spec|features)/})
+  end
+  spec.bindir        = "exe"
+  spec.executables   = spec.files.grep(%r{^exe/}) { |f| File.basename(f) }
+  spec.require_paths = ["lib"]
+
+  spec.add_development_dependency "bundler", "~> 1.13"
+  spec.add_development_dependency "rake", "~> 10.0"
+  spec.add_development_dependency "rspec", "~> 3.0"
+end

metadata

@@ -0,0 +1,101 @@
+--- !ruby/object:Gem::Specification
+name: t_nn
+version: !ruby/object:Gem::Version
+  version: 0.0.1
+platform: ruby
+authors:
+- tcom
+autorequire: 
+bindir: exe
+cert_chain: []
+date: 2017-01-06 00:00:00.000000000 Z
+dependencies:
+- !ruby/object:Gem::Dependency
+  name: bundler
+  requirement: !ruby/object:Gem::Requirement
+    requirements:
+    - - "~>"
+      - !ruby/object:Gem::Version
+        version: '1.13'
+  type: :development
+  prerelease: false
+  version_requirements: !ruby/object:Gem::Requirement
+    requirements:
+    - - "~>"
+      - !ruby/object:Gem::Version
+        version: '1.13'
+- !ruby/object:Gem::Dependency
+  name: rake
+  requirement: !ruby/object:Gem::Requirement
+    requirements:
+    - - "~>"
+      - !ruby/object:Gem::Version
+        version: '10.0'
+  type: :development
+  prerelease: false
+  version_requirements: !ruby/object:Gem::Requirement
+    requirements:
+    - - "~>"
+      - !ruby/object:Gem::Version
+        version: '10.0'
+- !ruby/object:Gem::Dependency
+  name: rspec
+  requirement: !ruby/object:Gem::Requirement
+    requirements:
+    - - "~>"
+      - !ruby/object:Gem::Version
+        version: '3.0'
+  type: :development
+  prerelease: false
+  version_requirements: !ruby/object:Gem::Requirement
+    requirements:
+    - - "~>"
+      - !ruby/object:Gem::Version
+        version: '3.0'
+description: my nn lib
+email:
+- okano565656@gmail.com
+executables: []
+extensions: []
+extra_rdoc_files: []
+files:
+- ".gitignore"
+- ".rspec"
+- ".travis.yml"
+- CODE_OF_CONDUCT.md
+- Gemfile
+- LICENSE.txt
+- README.md
+- Rakefile
+- bin/console
+- bin/setup
+- lib/t_nn.rb
+- lib/t_nn/feedforward_neural_network.rb
+- lib/t_nn/hop_field_network.rb
+- lib/t_nn/version.rb
+- t_nn.gemspec
+homepage: https://github.com/Tcom242242/t_nn
+licenses:
+- MIT
+metadata: {}
+post_install_message: 
+rdoc_options: []
+require_paths:
+- lib
+required_ruby_version: !ruby/object:Gem::Requirement
+  requirements:
+  - - ">="
+    - !ruby/object:Gem::Version
+      version: '0'
+required_rubygems_version: !ruby/object:Gem::Requirement
+  requirements:
+  - - ">="
+    - !ruby/object:Gem::Version
+      version: '0'
+requirements: []
+rubyforge_project: 
+rubygems_version: 2.5.1
+signing_key: 
+specification_version: 4
+summary: my nn lib
+test_files: []