swissparser 0.11.1 → 1.0.0

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+ *~
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+ *#
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+
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+ *.gemspec
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+ announcement.txt
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+
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+ coverage/
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+ doc/
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+ pkg/
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+ == 1.0.0 / 2010-01-11
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+
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+ * New release, the syntax for defining rules and parsers was simplified.
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+ ATTENTION: this version is not backward compatible !
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+
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+ == 0.90.0 / 2009-12-30
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+
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+ * Complete rewrite to simplify parser definition.
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+
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  == 0.11.1 / 2009-11-17
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  * 1 bug fix:
@@ -4,48 +4,59 @@
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  == DESCRIPTION:
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- Simple DSL to define parser for flat files formats common in biofinformatics.
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+ Simple DSL to define parser for flat files formats common in
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+ biofinformatics, such as Swissprot, Uniprot, KEGG, TREMBL, etc.
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- == FEATURES:
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+ SwissParser API was changed in its version 1.0.0 to simplify parser
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+ definition. The code was tested on entire Uniprot and KEGG releases
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+ and functional testing guarantees that existing features will not
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+ break after an update.
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+
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+ === Compatibility with 0.x versions
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- SwissParser is currently under fast development. However, the code base should
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- be stable enough to be used for bioinformatics research.
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+ The 1.x versions represent an API change which is *not* *backward*
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+ *compatible*. However, the rules definitions and helper need small
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+ changes. A wiki page will soon give instructions for updating your
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+ parsers.
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+
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+ == FEATURES:
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23
 
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  * Defines parsers with a clear and compact declarative syntax.
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  * The whole parsing workflow is configurable.
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  * Able to parse remote files accessible from a web or an FTP server.
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  * Users can create new parsers by extending existing parsers.
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- * A parser have access to global parameters and user defined helper methods.
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+ * Parser rules have access to user defined helper methods.
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  == USAGE:
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- See tutorials: http://wiki.github.com/paradigmatic/SwissParser
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+ See:
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+
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+ * tutorials: http://wiki.github.com/paradigmatic/SwissParser
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+ * examples: http://github.com/paradigmatic/SwissParser/tree/master/examples/
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  == REQUIREMENTS:
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  SwissParser uses only pure standard ruby.
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- Thanks to multiruby it was successfuly tested with
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+ Thanks to rvm it was successfuly tested with
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  versions:
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- * 1.9.1-p243
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- * 1.8.7-p174
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- * 1.8.6-p383
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- * jruby-bin-1.3.1
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+ * ruby-1.8.7-p302
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+ * ruby-1.9.2-p0
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+ * jruby-1.5.2
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- If you want to participate in SwissParser developpement, you will need the gem *bones*.
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- == INSTALL:
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+ No other gems are required to use it. However, if you want to
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+ participate in SwissParser developpement, you will need the gem
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+ *bones*, *rspec* and *cucumber*.
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- SwissParser is available as a gem through gemcutter. If you still use
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- rubyforge, you will need to change the sources as explained here:
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- http://gemcutter.org/pages/gem_docs
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+ == INSTALL:
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  Then you can simply install SwissParser with:
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  gem install swissparser
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- and start defining parsers by requiring it:
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+ and start parsers definitions by requiring it:
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  require 'swissparser'
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data/Rakefile CHANGED
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  task :default => :features
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  Cucumber::Rake::Task.new(:features) do |t|
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- t.cucumber_opts = "--format pretty"
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- t.rcov = true
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+ t.cucumber_opts = "--format pretty --tags ~@skip"
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+ #t.rcov = true
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  end
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  CLOBBER << "coverage/"
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