sushi_fabric 1.1.1 → 1.1.2

checksums.yaml

@@ -1,7 +1,7 @@
 ---
 SHA256:
-  metadata.gz: f27bf481942df3066dc10ead974eb849cbc0c2f7ad010599d2d75b7cdf9d6762
-  data.tar.gz: fd39ea3911fd3f9571ceb4c3b2071e51103109d85f7e9e042edabddc95733adc
+  metadata.gz: d8673a804328196ed41af9ab969a5ae84871bcdfe642e699c7564d9a30ebeb5b
+  data.tar.gz: 3749f2baffa9e17e37e26e36d5942bcef0d70d0ad6e1b34844892e48ab2e9482
 SHA512:
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-  data.tar.gz: 930e64f997d8383991e88c5c6f21fab27d5c1f40e59e16987b002a62615d96aa65571eca1c055708c75b0f96496bd3bf3a9ee72d025e5a75e1e1e79b8143c973
+  metadata.gz: 0dc67d3759495c74ca090c919843dd2be3a05243a74bf9ad5a4966c9522d9434216320a9ad98edcb01eea7207f7caececa1212c4c0cefef7f561fe5710690121
+  data.tar.gz: 1e81885828d563c1008c1b80b40f88fd9045de043715ca99c60b900dedb8671eda0746d90fb1a4505332230c0294cad073001c2b9af6ca3643f756e4e7f9f395

data/lib/sushi_fabric/sushiApp.rb

@@ -1,6 +1,6 @@
 #!/usr/bin/env ruby
 # encoding: utf-8
-# Version = '20210813-192118'
+# Version = '20211015-142855'
 
 require 'csv'
 require 'fileutils'
@@ -20,6 +20,7 @@ module SushiFabric
     config.scratch_dir = '/tmp/scratch'
     config.module_source = nil
     config.course_mode = nil
+    config.rails_host = nil
   end
 
   # load custmized parameters if there is
@@ -41,6 +42,7 @@ module SushiFabric
     config.scratch_dir = '/tmp/scratch'
     config.module_source = nil
     config.course_mode = nil
+    config.rails_host = nil
   end
 end
       EOF
@@ -53,7 +55,7 @@ end
   SUSHI_APP_DIR = config.sushi_app_dir
   SCRATCH_DIR = config.scratch_dir
   MODULE_SOURCE = config.module_source
-  
+  RAILS_HOST = config.rails_host 
   unless File.exist?(GSTORE_DIR)
     FileUtils.mkdir_p GSTORE_DIR
   end
@@ -524,7 +526,7 @@ rm -rf #{@scratch_dir} || exit 1
     job_id = 0
     begin
       #job_id = @workflow_manager.start_monitoring(job_script, @user, 0, script_content, project_number, gsub_options.join(' '), @gstore_script_dir)
-      job_id = @workflow_manager.start_monitoring3(job_script, script_content, @user, project_number, gsub_options.join(' '), @gstore_script_dir, @next_dataset_id)
+      job_id = @workflow_manager.start_monitoring3(job_script, script_content, @user, project_number, gsub_options.join(' '), @gstore_script_dir, @next_dataset_id, RAILS_HOST)
     rescue => e
       time = Time.now.strftime("[%Y.%m.%d %H:%M:%S]")
       @logger.error("*"*50)

data/lib/sushi_fabric/version.rb

@@ -1,3 +1,3 @@
 module SushiFabric
-  VERSION = "1.1.1"
+  VERSION = "1.1.2"
 end

metadata

@@ -1,14 +1,14 @@
 --- !ruby/object:Gem::Specification
 name: sushi_fabric
 version: !ruby/object:Gem::Version
-  version: 1.1.1
+  version: 1.1.2
 platform: ruby
 authors:
 - Functional Genomics Center Zurich
 autorequire: 
 bindir: bin
 cert_chain: []
-date: 2021-08-15 00:00:00.000000000 Z
+date: 2021-10-15 00:00:00.000000000 Z
 dependencies:
 - !ruby/object:Gem::Dependency
   name: bundler