sushi_fabric 0.6.2 → 0.6.3

checksums.yaml

@@ -1,7 +1,7 @@
 ---
 SHA1:
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-  data.tar.gz: b5c40a65c50b874dbc1a26815144810b16f67b26
+  metadata.gz: eb3c7b926db086c8ed7e1ceb0c1931388dcb4ac9
+  data.tar.gz: d8192ad40f84de8f5d71798597c9265b246d70e2
 SHA512:
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+  data.tar.gz: 4089dc1323ce6dd2cd799dd6806595770e347bce89d6afde0d511e5f85913c4276763a4d4f358fcb52bfa683cb54c388bdc034f4a50ae75cd56589f65e5fb470

data/lib/sushi_fabric/sushiApp.rb

@@ -1,6 +1,6 @@
 #!/usr/bin/env ruby
 # encoding: utf-8
-# Version = '20161103-080724'
+# Version = '20161103-082137'
 
 require 'csv'
 require 'fileutils'
@@ -568,9 +568,9 @@ rm -rf #{@scratch_dir} || exit 1
       ## WRITE THE JOB SCRIPT
       sample_name = @dataset['Name']||@dataset.first
       @job_script = if @dataset_sushi_id and dataset = DataSet.find_by_id(@dataset_sushi_id.to_i)
-                      File.join(@job_script_dir, sample_name) + '_' + dataset.name.gsub(/\s+/,'_') + '.sh'
+                      File.join(@job_script_dir, @analysis_category + '_' + sample_name) + '_' + dataset.name.gsub(/\s+/,'_') + '.sh'
                     else 
-                      File.join(@job_script_dir, sample_name) + '.sh'
+                      File.join(@job_script_dir, @analysis_category + '_' + sample_name) + '.sh'
                     end
       make_job_script
       @job_scripts << @job_script
@@ -579,9 +579,9 @@ rm -rf #{@scratch_dir} || exit 1
   end
   def dataset_mode
     @job_script = if @dataset_sushi_id and dataset = DataSet.find_by_id(@dataset_sushi_id.to_i)
-                    File.join(@job_script_dir, dataset.name.gsub(/\s+/,'_') + '.sh')
+                    File.join(@job_script_dir, @analysis_category + '_' + dataset.name.gsub(/\s+/,'_') + '.sh')
                   else 
-                    File.join(@job_script_dir, 'job_script.sh')
+                    File.join(@job_script_dir, @analysis_category + '_' + 'job_script.sh')
                   end
     make_job_script
     @job_scripts << @job_script

data/lib/sushi_fabric/version.rb

@@ -1,3 +1,3 @@
 module SushiFabric
-  VERSION = "0.6.2"
+  VERSION = "0.6.3"
 end

metadata

@@ -1,7 +1,7 @@
 --- !ruby/object:Gem::Specification
 name: sushi_fabric
 version: !ruby/object:Gem::Version
-  version: 0.6.2
+  version: 0.6.3
 platform: ruby
 authors:
 - Functional Genomics Center Zurich