sushi_fabric 0.3.3 → 0.3.5

data/bin/sushi_fabric

@@ -1,6 +1,6 @@
 #!/usr/bin/env ruby
 # encoding: utf-8
-# Version = '20141222-172420'
+# Version = '20150326-155111'
 
 require 'sushi_fabric'
 
@@ -15,8 +15,8 @@ Usage:
   o.on(:dataset_tsv, '-d dataset_tsv', '--dataset', String, 'DataSet file (.tsv) (This option is prior to dataset_id option)')
   o.on(:parameterset_tsv, '-m parameterset_tsv', '--parameterset', String, 'Parameterset file (.tsv)')
   o.on(:run_mode, '-r', '--run', 'Real run mode. without this option, it runs with test run mode which checks only DataSet and Parameters and no submittion')
-  o.on(:project, '1001', '-p', '--project', String, 'Project Number (default: 1001)')
-  o.on(:user, 'sushi_lover', '-u', '--user', String, 'Submit user (default: sushi_lover)')
+  o.on(:project, '1001', '-p project', '--project', String, 'Project Number (default: 1001)')
+  o.on(:user, 'sushi_lover', '-u user', '--user', String, 'Submit user (default: sushi_lover)')
   o.on(:load_path, '-I load_path', '--load_path', 'Add path where SushiApp class is located (default: ./lib)')
   o.on(:next_dataset_name, '-n next_dataset_name', '--next_dataset_name', 'Next DataSet Name (default: Analysis_Category+ID+Date )')
   o.parse!(ARGV)

data/lib/sushi_fabric/sushiApp.rb

@@ -1,6 +1,6 @@
 #!/usr/bin/env ruby
 # encoding: utf-8
-# Version = '20150326-142037'
+# Version = '20150326-150304'
 
 require 'csv'
 require 'fileutils'
@@ -202,6 +202,23 @@ class SushiApp
         @dataset_hash << row.to_hash
         @dataset << row.to_hash
       end
+
+      # save in sushi db
+      data_set_arr = []
+      headers = []
+      rows = []
+      data_set_arr = {'DataSetName'=>File.basename(@dataset_tsv_file).gsub(/.tsv/, ''), 'ProjectNumber'=>@project.gsub(/p/,'')}
+      csv = CSV.readlines(@dataset_tsv_file, :col_sep=>"\t")
+      csv.each do |row|
+        if headers.empty?
+          headers = row
+        else
+          rows << row
+        end
+      end
+      unless NO_ROR
+        @dataset_sushi_id = save_data_set(data_set_arr.to_a.flatten, headers, rows)
+      end
     elsif @dataset_sushi_id
       @dataset_hash = []
       @dataset = []

data/lib/sushi_fabric/version.rb

@@ -1,3 +1,3 @@
 module SushiFabric
-  VERSION = "0.3.3"
+  VERSION = "0.3.5"
 end

metadata

@@ -1,7 +1,7 @@
 --- !ruby/object:Gem::Specification
 name: sushi_fabric
 version: !ruby/object:Gem::Version
-  version: 0.3.3
+  version: 0.3.5
   prerelease: 
 platform: ruby
 authors: