sequenceserver 1.0.9 → 1.0.10

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Files changed (6) hide show
  1. checksums.yaml +4 -4
  2. data/lib/sequenceserver/blast/report.rb +3 -2
  3. data/lib/sequenceserver/version.rb +1 -1
  4. data/package.json +1 -1
  5. data/views/search.erb +1 -0
  6. metadata +3 -3
checksums.yaml CHANGED
@@ -1,7 +1,7 @@
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  SHA1:
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- metadata.gz: 377a59dc018c8f3b29b5fdf13053596cf64e3692
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- data.tar.gz: dac95b98ef707bd1f31f720da2d7c8bdc917bd2e
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+ metadata.gz: 66da846389f3ce5c74ae20a5059a6eda2bb9773f
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+ data.tar.gz: 5c9f1391166ea5ef3f3c933b1fd7e8d29ab442f5
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  SHA512:
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- metadata.gz: 68c2d0fe6755ed18258a8c80018158589f0b9564b7d5479778a1d23db1020aad033fee9660440113e180fd5608eae73feba84efcf472f45b91f850e416ce4192
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- data.tar.gz: 9b4206c5f045621ebfd42d99e4a5209c7cd48bd89297c684b95f897a6b12232ffc79ea3d8c6c9570da6ac9efdf6ecfdad975cadeef502c827bdb75a198e1c7f3
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+ metadata.gz: 63fa546748a645f125411f96cce4b26993ba932f26c396cef8cd9f14f7ae221e6e04055d54a2d0dffec5892a4b25cb970eec69fa8f7d057bb1ca93f097a0e5ee
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+ data.tar.gz: f98a024ab509a0301a3397432ab8078c435464e56448de6418e9390b360a72745b48969fd8b719b255053024d90b7637cb28ce7597983ce3c0fd00f22f2c74e3
data/lib/sequenceserver/blast/report.rb CHANGED
@@ -33,8 +33,9 @@ module SequenceServer
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  # Generate report.
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  def generate
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- xml = Formatter.run(search_id, 'xml').file
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- ir = node_to_array(Ox.parse(xml.open.read).root)
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+ ox = Ox.load_file(Formatter.run(search_id, 'xml').file.path,
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+ :skip => :skip_none)
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+ ir = node_to_array ox.root
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  extract_program_info ir
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  extract_params ir
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  extract_stats ir
data/lib/sequenceserver/version.rb CHANGED
@@ -1,4 +1,4 @@
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  # Define version number.
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  module SequenceServer
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- VERSION = '1.0.9'
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+ VERSION = '1.0.10'
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  end
data/package.json CHANGED
@@ -1,7 +1,7 @@
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  {
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  "name": "SequenceServer",
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  "description": "BLAST search made easy!",
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- "version": "1.0.9",
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+ "version": "1.0.10",
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  "homepage": "http://www.sequenceserver.com",
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  "repository": "https://github.com/yannickwurm/sequenceserver",
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  "author": {
data/views/search.erb CHANGED
@@ -418,6 +418,7 @@
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  class="modal-content">
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  <div
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  class="modal-header">
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+ <button type="button" class="close" data-dismiss="modal" aria-label="Close"><span aria-hidden="true">&times;</span></button>
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  <h3>View and download sequence</h3>
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  </div>
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metadata CHANGED
@@ -1,7 +1,7 @@
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  --- !ruby/object:Gem::Specification
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  name: sequenceserver
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  version: !ruby/object:Gem::Version
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- version: 1.0.9
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+ version: 1.0.10
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  platform: ruby
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  authors:
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  - Anurag Priyam
@@ -11,7 +11,7 @@ authors:
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  autorequire:
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  bindir: bin
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  cert_chain: []
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- date: 2016-11-19 00:00:00.000000000 Z
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+ date: 2017-06-13 00:00:00.000000000 Z
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  dependencies:
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  - !ruby/object:Gem::Dependency
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  name: sinatra
@@ -683,7 +683,7 @@ required_rubygems_version: !ruby/object:Gem::Requirement
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  version: '0'
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  requirements: []
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  rubyforge_project:
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- rubygems_version: 2.2.5
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+ rubygems_version: 2.5.2
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  signing_key:
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  specification_version: 4
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  summary: BLAST search made easy!