seqtrimnext 2.0.38 → 2.0.39

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data/History.txt CHANGED
@@ -1,3 +1,7 @@
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+ === 2.0.39 2011-07-07
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+
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+ Fixed database list option
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+
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  === 2.0.38 2011-07-07
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  Optional Initial Stats generation in templates
data/bin/seqtrimnext CHANGED
@@ -237,12 +237,12 @@ optparse = OptionParser.new do |opts|
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  options[:qual] = file
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  end
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-
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-
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  options[:list_db] = nil
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+ options[:list_db_name] = 'ALL'
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+
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  opts.on( '-L', '--list_db [DB_NAME]', 'List entries IDs in DB_NAME. Use "-L all" to view all available databases' ) do |value|
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  options[:list_db] = true
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- options[:list_db_name] = value
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+ options[:list_db_name] = value if value
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  end
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  options[:gen_params] = false
@@ -280,7 +280,7 @@ optparse.parse!
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  if options[:list_db] then
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  # List database entries in a database
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- ListDb.new($DB_PATH,options[:list_db])
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+ ListDb.new($DB_PATH,options[:list_db_name])
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  exit
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  end
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data/lib/seqtrimnext.rb CHANGED
@@ -30,7 +30,7 @@ module Seqtrimnext
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  # SEQTRIM_VERSION_STAGE = 'b'
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  # SEQTRIM_VERSION = "2.0.0#{SEQTRIM_VERSION_STAGE}#{SEQTRIM_VERSION_REVISION}"
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- VERSION = '2.0.38'
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+ VERSION = '2.0.39'
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  SEQTRIM_VERSION = VERSION
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metadata CHANGED
@@ -2,7 +2,7 @@
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  name: seqtrimnext
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  version: !ruby/object:Gem::Version
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  prerelease:
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- version: 2.0.38
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+ version: 2.0.39
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  platform: ruby
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  authors:
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  - Dario Guerrero & Almudena Bocinos