semin-ulla 0.9.4 → 0.9.5
Sign up to get free protection for your applications and to get access to all the features.
- data/History.txt +4 -0
- data/Manifest.txt +2 -0
- data/lib/ulla/cli.rb +11 -11
- data/lib/ulla.rb +1 -1
- data/ulla.gemspec +2 -2
- metadata +3 -1
data/History.txt
CHANGED
data/Manifest.txt
CHANGED
@@ -7,11 +7,13 @@ Rakefile
|
|
7
7
|
bin/ulla
|
8
8
|
config/website.yml
|
9
9
|
config/website.yml.sample
|
10
|
+
lib/.nmatrix_extensions.rb.swp
|
10
11
|
lib/math_extensions.rb
|
11
12
|
lib/narray_extensions.rb
|
12
13
|
lib/nmatrix_extensions.rb
|
13
14
|
lib/string_extensions.rb
|
14
15
|
lib/ulla.rb
|
16
|
+
lib/ulla/.cli.rb.swp
|
15
17
|
lib/ulla/cli.rb
|
16
18
|
lib/ulla/environment.rb
|
17
19
|
lib/ulla/environment_class_hash.rb
|
data/lib/ulla/cli.rb
CHANGED
@@ -6,17 +6,6 @@ require 'bio'
|
|
6
6
|
require 'set'
|
7
7
|
require 'facets'
|
8
8
|
|
9
|
-
require 'math_extensions'
|
10
|
-
require 'string_extensions'
|
11
|
-
require 'narray_extensions'
|
12
|
-
require 'nmatrix_extensions'
|
13
|
-
|
14
|
-
require 'ulla/environment'
|
15
|
-
require 'ulla/environment_class_hash'
|
16
|
-
require 'ulla/environment_feature'
|
17
|
-
require 'ulla/environment_feature_array'
|
18
|
-
require 'ulla/heatmap_array'
|
19
|
-
|
20
9
|
# This is a module for an actual command line interpreter for Ulla
|
21
10
|
# ---
|
22
11
|
# Copyright (C) 2008-9 Semin Lee
|
@@ -362,6 +351,17 @@ Options:
|
|
362
351
|
exit 1
|
363
352
|
end
|
364
353
|
|
354
|
+
require 'math_extensions'
|
355
|
+
require 'string_extensions'
|
356
|
+
require 'narray_extensions'
|
357
|
+
require 'nmatrix_extensions'
|
358
|
+
|
359
|
+
require 'ulla/environment'
|
360
|
+
require 'ulla/environment_class_hash'
|
361
|
+
require 'ulla/environment_feature'
|
362
|
+
require 'ulla/environment_feature_array'
|
363
|
+
require 'ulla/heatmap_array'
|
364
|
+
|
365
365
|
#
|
366
366
|
# Part 2 END
|
367
367
|
#
|
data/lib/ulla.rb
CHANGED
data/ulla.gemspec
CHANGED
@@ -2,7 +2,7 @@
|
|
2
2
|
|
3
3
|
Gem::Specification.new do |s|
|
4
4
|
s.name = %q{ulla}
|
5
|
-
s.version = "0.9.
|
5
|
+
s.version = "0.9.5"
|
6
6
|
|
7
7
|
s.required_rubygems_version = Gem::Requirement.new(">= 0") if s.respond_to? :required_rubygems_version=
|
8
8
|
s.authors = ["Semin Lee"]
|
@@ -12,7 +12,7 @@ Gem::Specification.new do |s|
|
|
12
12
|
s.email = ["seminlee@gmail.com"]
|
13
13
|
s.executables = ["ulla"]
|
14
14
|
s.extra_rdoc_files = ["History.txt", "Manifest.txt", "PostInstall.txt", "README.rdoc", "website/index.txt"]
|
15
|
-
s.files = [".autotest", "History.txt", "Manifest.txt", "PostInstall.txt", "README.rdoc", "Rakefile", "bin/ulla", "config/website.yml", "config/website.yml.sample", "lib/math_extensions.rb", "lib/narray_extensions.rb", "lib/nmatrix_extensions.rb", "lib/string_extensions.rb", "lib/ulla.rb", "lib/ulla/cli.rb", "lib/ulla/environment.rb", "lib/ulla/environment_class_hash.rb", "lib/ulla/environment_feature.rb", "lib/ulla/environment_feature_array.rb", "lib/ulla/heatmap_array.rb", "script/console", "script/destroy", "script/generate", "script/txt2html", "test/test_helper.rb", "test/test_math_extensions.rb", "test/test_narray_extensions.rb", "test/test_nmatrix_extensions.rb", "test/test_string_extensions.rb", "test/test_ulla.rb", "test/ulla/test_cli.rb", "test/ulla/test_environment_class_hash.rb", "test/ulla/test_environment_feature.rb", "ulla.gemspec", "website/index.html", "website/index.txt", "website/javascripts/rounded_corners_lite.inc.js", "website/stylesheets/screen.css", "website/template.html.erb"]
|
15
|
+
s.files = [".autotest", "History.txt", "Manifest.txt", "PostInstall.txt", "README.rdoc", "Rakefile", "bin/ulla", "config/website.yml", "config/website.yml.sample", "lib/.nmatrix_extensions.rb.swp", "lib/math_extensions.rb", "lib/narray_extensions.rb", "lib/nmatrix_extensions.rb", "lib/string_extensions.rb", "lib/ulla.rb", "lib/ulla/.cli.rb.swp", "lib/ulla/cli.rb", "lib/ulla/environment.rb", "lib/ulla/environment_class_hash.rb", "lib/ulla/environment_feature.rb", "lib/ulla/environment_feature_array.rb", "lib/ulla/heatmap_array.rb", "script/console", "script/destroy", "script/generate", "script/txt2html", "test/test_helper.rb", "test/test_math_extensions.rb", "test/test_narray_extensions.rb", "test/test_nmatrix_extensions.rb", "test/test_string_extensions.rb", "test/test_ulla.rb", "test/ulla/test_cli.rb", "test/ulla/test_environment_class_hash.rb", "test/ulla/test_environment_feature.rb", "ulla.gemspec", "website/index.html", "website/index.txt", "website/javascripts/rounded_corners_lite.inc.js", "website/stylesheets/screen.css", "website/template.html.erb"]
|
16
16
|
s.has_rdoc = true
|
17
17
|
s.homepage = %q{http://www-cryst.bioc.cam.ac.uk/ulla}
|
18
18
|
s.post_install_message = %q{PostInstall.txt}
|
metadata
CHANGED
@@ -1,7 +1,7 @@
|
|
1
1
|
--- !ruby/object:Gem::Specification
|
2
2
|
name: semin-ulla
|
3
3
|
version: !ruby/object:Gem::Version
|
4
|
-
version: 0.9.
|
4
|
+
version: 0.9.5
|
5
5
|
platform: ruby
|
6
6
|
authors:
|
7
7
|
- Semin Lee
|
@@ -95,11 +95,13 @@ files:
|
|
95
95
|
- bin/ulla
|
96
96
|
- config/website.yml
|
97
97
|
- config/website.yml.sample
|
98
|
+
- lib/.nmatrix_extensions.rb.swp
|
98
99
|
- lib/math_extensions.rb
|
99
100
|
- lib/narray_extensions.rb
|
100
101
|
- lib/nmatrix_extensions.rb
|
101
102
|
- lib/string_extensions.rb
|
102
103
|
- lib/ulla.rb
|
104
|
+
- lib/ulla/.cli.rb.swp
|
103
105
|
- lib/ulla/cli.rb
|
104
106
|
- lib/ulla/environment.rb
|
105
107
|
- lib/ulla/environment_class_hash.rb
|