search_biomodel 2.1.1 → 2.1.2
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- data/VERSION +1 -1
- data/lib/search_biomodel.rb +5 -5
- data/search_biomodel.gemspec +1 -1
- metadata +3 -3
data/VERSION
CHANGED
|
@@ -1 +1 @@
|
|
|
1
|
-
2.1.
|
|
1
|
+
2.1.2
|
data/lib/search_biomodel.rb
CHANGED
|
@@ -39,7 +39,7 @@ module SysMODB
|
|
|
39
39
|
|
|
40
40
|
results.each_with_index do |a, i|
|
|
41
41
|
sbml_results[i] = Hash.new
|
|
42
|
-
sbml_results[i] = Nori.parse(@connection.getSimpleModel(a))[:simple_models][:simple_model]
|
|
42
|
+
sbml_results[i] = Nori.parse(@connection.getSimpleModel(a))[:simple_models][:simple_model] unless a.nil?
|
|
43
43
|
end
|
|
44
44
|
sbml_results
|
|
45
45
|
end
|
|
@@ -52,7 +52,7 @@ module SysMODB
|
|
|
52
52
|
soap.body = {:id => model_id, :attributes! => {:id => {"xsi:type" => "xsd:string"}}}
|
|
53
53
|
end
|
|
54
54
|
|
|
55
|
-
search_results = response.to_hash[:get_model_by_id_response][:get_model_by_id_return]
|
|
55
|
+
search_results = response.to_hash[:get_model_by_id_response][:get_model_by_id_return] unless response.nil?
|
|
56
56
|
if search_results.nil?
|
|
57
57
|
[]
|
|
58
58
|
else
|
|
@@ -68,7 +68,7 @@ module SysMODB
|
|
|
68
68
|
soap.body = {:id => model_id, :attributes! => {:id => {"xsi:type" => "xsd:string"}}}
|
|
69
69
|
end
|
|
70
70
|
|
|
71
|
-
search_results = response.to_hash[:get_simple_model_by_id_response][:get_simple_model_by_id_return]
|
|
71
|
+
search_results = response.to_hash[:get_simple_model_by_id_response][:get_simple_model_by_id_return] unless response.nil?
|
|
72
72
|
|
|
73
73
|
if search_results.nil?
|
|
74
74
|
[]
|
|
@@ -87,7 +87,7 @@ module SysMODB
|
|
|
87
87
|
soap.body = {:ChEBBId => search_string, :attributes! => {:ChEBBId => {"xsi:type" => "xsd:string"}}}
|
|
88
88
|
end
|
|
89
89
|
|
|
90
|
-
search_results = response.to_hash[:get_models_id_by_ch_ebi_id_response][:get_models_id_by_ch_ebi_id_return][:get_models_id_by_ch_ebi_id_return]
|
|
90
|
+
search_results = response.to_hash[:get_models_id_by_ch_ebi_id_response][:get_models_id_by_ch_ebi_id_return][:get_models_id_by_ch_ebi_id_return] unless response.nil?
|
|
91
91
|
if search_results.nil?
|
|
92
92
|
[]
|
|
93
93
|
else
|
|
@@ -143,7 +143,7 @@ module SysMODB
|
|
|
143
143
|
response = client.request(:biom, "get_all_models") do
|
|
144
144
|
soap.body = {:modelName => "?", :attributes! => {:modelName => {"xsi:type" => "xsd:string"}}}
|
|
145
145
|
end
|
|
146
|
-
search_results = response.to_hash[:multi_ref][:item]
|
|
146
|
+
search_results = response.to_hash[:multi_ref][:item] unless response.nil?
|
|
147
147
|
if search_results.nil?
|
|
148
148
|
[]
|
|
149
149
|
else
|
data/search_biomodel.gemspec
CHANGED
metadata
CHANGED
|
@@ -1,13 +1,13 @@
|
|
|
1
1
|
--- !ruby/object:Gem::Specification
|
|
2
2
|
name: search_biomodel
|
|
3
3
|
version: !ruby/object:Gem::Version
|
|
4
|
-
hash:
|
|
4
|
+
hash: 15
|
|
5
5
|
prerelease: false
|
|
6
6
|
segments:
|
|
7
7
|
- 2
|
|
8
8
|
- 1
|
|
9
|
-
-
|
|
10
|
-
version: 2.1.
|
|
9
|
+
- 2
|
|
10
|
+
version: 2.1.2
|
|
11
11
|
platform: ruby
|
|
12
12
|
authors:
|
|
13
13
|
- Niall Beard
|