scbi_fastq 0.0.21 → 0.0.22
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- checksums.yaml +4 -4
- data/lib/scbi_fastq/version.rb +1 -1
- data/scbi_fastq.gemspec +1 -1
- data/test/scbi_fastq_test.rb +3 -2
- metadata +3 -3
checksums.yaml
CHANGED
@@ -1,7 +1,7 @@
|
|
1
1
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---
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2
2
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SHA1:
|
3
|
-
metadata.gz:
|
4
|
-
data.tar.gz:
|
3
|
+
metadata.gz: 0613b7cdf31d5130e5f4825e31f74e382fd102cd
|
4
|
+
data.tar.gz: 89da08263e5293f6fede290f6d1b015694ff29ff
|
5
5
|
SHA512:
|
6
|
-
metadata.gz:
|
7
|
-
data.tar.gz:
|
6
|
+
metadata.gz: bfd8d6f9b304f204c6e2d27a677cb205d8004d303cb675b2e88866b9c8894ce832f786bae6bcbceed97ab2af566d095f3822612b1d8adfa018228be168942b8a
|
7
|
+
data.tar.gz: 302b1f5b88f68d593b17be3c495d577cb9e0eeb0eb9f199da3bfe33bf0e1996bce58c3641842af4196c4f7b0c77e92eb5efd0920a09b969caa580ef4c9d410c1
|
data/lib/scbi_fastq/version.rb
CHANGED
data/scbi_fastq.gemspec
CHANGED
@@ -18,7 +18,7 @@ Gem::Specification.new do |spec|
|
|
18
18
|
spec.test_files = spec.files.grep(%r{^(test|spec|features)/})
|
19
19
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spec.require_paths = ["lib"]
|
20
20
|
|
21
|
-
spec.add_runtime_dependency "scbi_zcat", ">= 0.0.
|
21
|
+
spec.add_runtime_dependency "scbi_zcat", ">= 0.0.2"
|
22
22
|
spec.add_development_dependency "bundler", "~> 1.7"
|
23
23
|
spec.add_development_dependency "rake", "~> 10.0"
|
24
24
|
end
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data/test/scbi_fastq_test.rb
CHANGED
@@ -228,12 +228,13 @@ class TestScbiFastq < Test::Unit::TestCase
|
|
228
228
|
#fill_file(100)
|
229
229
|
|
230
230
|
|
231
|
-
fqr=FastqFile.new('/tmp/pair2.fastq.gz')
|
231
|
+
#fqr=FastqFile.new('/tmp/pair2.fastq.gz')
|
232
|
+
fqr=FastqFile.new('/tmp/659634_4-4_2.fastq.gz')
|
232
233
|
|
233
234
|
i=1
|
234
235
|
|
235
236
|
fqr.each do |n,s,q|
|
236
|
-
puts n
|
237
|
+
#puts n
|
237
238
|
#assert_equal(@seq_name+i.to_s,n)
|
238
239
|
#assert_equal(@seq_fasta*i,s)
|
239
240
|
#assert_equal((@seq_qual*i*@seq_fasta.length),q)
|
metadata
CHANGED
@@ -1,7 +1,7 @@
|
|
1
1
|
--- !ruby/object:Gem::Specification
|
2
2
|
name: scbi_fastq
|
3
3
|
version: !ruby/object:Gem::Version
|
4
|
-
version: 0.0.
|
4
|
+
version: 0.0.22
|
5
5
|
platform: ruby
|
6
6
|
authors:
|
7
7
|
- dariogf
|
@@ -16,14 +16,14 @@ dependencies:
|
|
16
16
|
requirements:
|
17
17
|
- - ">="
|
18
18
|
- !ruby/object:Gem::Version
|
19
|
-
version: 0.0.
|
19
|
+
version: 0.0.2
|
20
20
|
type: :runtime
|
21
21
|
prerelease: false
|
22
22
|
version_requirements: !ruby/object:Gem::Requirement
|
23
23
|
requirements:
|
24
24
|
- - ">="
|
25
25
|
- !ruby/object:Gem::Version
|
26
|
-
version: 0.0.
|
26
|
+
version: 0.0.2
|
27
27
|
- !ruby/object:Gem::Dependency
|
28
28
|
name: bundler
|
29
29
|
requirement: !ruby/object:Gem::Requirement
|