rput 0.1.4 → 0.1.5
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- data/VERSION +1 -1
- data/lib/starter.rb +3 -3
- data/rput.gemspec +1 -1
- metadata +3 -3
data/VERSION
CHANGED
@@ -1 +1 @@
|
|
1
|
-
0.1.
|
1
|
+
0.1.5
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data/lib/starter.rb
CHANGED
@@ -30,7 +30,7 @@ class CycleController
|
|
30
30
|
end
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31
31
|
def run_as_batch(script, logpath)
|
32
32
|
raise "#{script} missing" unless File.exist?(script)
|
33
|
-
raise "#{
|
33
|
+
#raise "#{logpath} missing" unless File.exist?(logpath)
|
34
34
|
raise "User Number of parsimony trees not set" unless @opts[:num_parsi_trees] > 0
|
35
35
|
raise "Total Number of parsimony trees not set" unless @opts[:num_ptrees] > 0
|
36
36
|
opts = @opts[:iter].to_s
|
@@ -129,7 +129,7 @@ class TreeBunchStarter
|
|
129
129
|
:base_dir => @base_dir,
|
130
130
|
:exp_name => opts[:exp_name]
|
131
131
|
)
|
132
|
-
c.run_as_batch(@cluster_batch, @
|
132
|
+
c.run_as_batch(@cluster_batch, @logpath)
|
133
133
|
"cluster"
|
134
134
|
else
|
135
135
|
logput "****** Start update no #{@update_id} ********"
|
@@ -185,7 +185,7 @@ class TreeBunchStarter
|
|
185
185
|
:base_dir => @base_dir,
|
186
186
|
:exp_name => opts[:exp_name]
|
187
187
|
)
|
188
|
-
c.run_as_batch(@cluster_batch, @
|
188
|
+
c.run_as_batch(@cluster_batch, @logpath)
|
189
189
|
"cluster"
|
190
190
|
else
|
191
191
|
logput "Start generating initial bunch"
|
data/rput.gemspec
CHANGED
metadata
CHANGED
@@ -1,13 +1,13 @@
|
|
1
1
|
--- !ruby/object:Gem::Specification
|
2
2
|
name: rput
|
3
3
|
version: !ruby/object:Gem::Version
|
4
|
-
hash:
|
4
|
+
hash: 17
|
5
5
|
prerelease:
|
6
6
|
segments:
|
7
7
|
- 0
|
8
8
|
- 1
|
9
|
-
-
|
10
|
-
version: 0.1.
|
9
|
+
- 5
|
10
|
+
version: 0.1.5
|
11
11
|
platform: ruby
|
12
12
|
authors:
|
13
13
|
- Fernando Izquierdo-Carrasco
|