rbbt-util 5.34.10 → 5.34.11

checksums.yaml

@@ -1,7 +1,7 @@
 ---
 SHA256:
-  metadata.gz: c8d689458bf34dc4d6f87f0541579a39ce1820470028db527ea366ad9ebb5c60
-  data.tar.gz: 4adc7dfec047abdeff9783386c2d0c017b37e4459b51d928179dc9199a779b5c
+  metadata.gz: 32b17775f7faf2220a471559cf7faf7db5f2515001a19e1fe5d70f3b588c06dd
+  data.tar.gz: '09b9518c2dadcdff12799cb9ece8b91a1f096c3953e695854fdf4b937868a345'
 SHA512:
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-  data.tar.gz: a61457b87e1ce1243c903e46bf06f88242fbb6e939eb44f9fb23a8531c24e023471cbb2d42ecd7f3886eb7efa52d333ac94df348a0f8e29be0eecacc4d5d0ae8
+  metadata.gz: 56976a81e8aca514a836fd260d8e57c074252f9ef1e03bfb54496c1107bd6ecf27fa33f9e7d9f4c8ca39f5e8a4a2cc28c560e15cb26ec81855202aea8a53d41c
+  data.tar.gz: b195a055a913b56dd3cb70dc1da1bede56462a7eb55bce0ff437a53abdf556cee39dad8f8e49a6246705116990a666adc24e354345d5759d1f0d3690df2908dd

data/bin/rbbt_find.rb

@@ -65,7 +65,7 @@ found.each do |path|
     if nocolor
       puts path
     else
-      color = File.exists?(path) ? (File.directory?(path) ? :blue : nil) : :red
+      color = File.exist?(path) ? (File.directory?(path) ? :blue : nil) : :red
       puts Log.color color, path
     end
 

data/lib/rbbt/util/config.rb

@@ -125,6 +125,8 @@ module Rbbt::Config
     if String === value && m = value.match(/^env:(.*)/)
       variable = m.captures.first
       ENV[variable]
+    elsif value == 'nil'
+      nil
     else
       value
     end

data/test/rbbt/entity/test_identifiers.rb

@@ -52,7 +52,7 @@ class TestEntityIdentifiers < Test::Unit::TestCase
     tsv.key_field = key_field
     tsv.fields = [description_field, gene_field]
     descriptions = tsv.slice(description_field)
-    Open.write(description_file, descriptions.to_single.to_s) #unless File.exists? description_file
+    Open.write(description_file, descriptions.to_single.to_s) #unless File.exist? description_file
     values = tsv.slice(gene_field)
     values.identifiers = description_file
 

data/test/rbbt/util/test_open.rb

@@ -181,7 +181,7 @@ class TestOpen < Test::Unit::TestCase
       Misc.consume_stream(StringIO.new(text), false, file)
 
       assert_equal text, Open.read(file)
-      assert !File.exists?(file)
+      assert !File.exist?(file)
       assert Open.exists? file
     end
 

metadata

@@ -1,7 +1,7 @@
 --- !ruby/object:Gem::Specification
 name: rbbt-util
 version: !ruby/object:Gem::Version
-  version: 5.34.10
+  version: 5.34.11
 platform: ruby
 authors:
 - Miguel Vazquez