rbbt-util 5.26.71 → 5.26.72

checksums.yaml

@@ -1,7 +1,7 @@
 ---
 SHA256:
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-  data.tar.gz: f52aa959fd3bff75cfdb484412c504af9bd2bf59f2b5f0932475eadf2ad3e93d
+  metadata.gz: 48218a636227053649451600d1225572ad96f01ed39d67fbf42a1f8f8c7c7c77
+  data.tar.gz: 612183134de313b8a3dd986faf314d2593ce95c7a2c17d8146d5cdf6eb5b5ff9
 SHA512:
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-  data.tar.gz: 3fb1e8e47fe3b04641bbd526962a1e58be8e197f7ec309465f7ff6944e0d605d84cd03a039f62f148922916e37fbd6de04842025c45b6bab0aea5c20121ede4e
+  metadata.gz: de75682521e5fa1ada0d0f1e3fca19bd20ad6d877abe1a070c6244e7de6a22d7f2564d89308b9a27a7a0de7ab150f4aa58566f78a4bbe89c3fdcd695e262998c
+  data.tar.gz: 017f12231eaf26f807b00a5317f656b2694f70c9cf38cc4044648abdd313c2083124cd49120fb08550700d297d7807fb4a26defc69aa55c4143fd2c23fcc3c87

data/lib/rbbt/rest/client.rb

@@ -43,7 +43,6 @@ class WorkflowRESTClient
       end
     end
 
-    
     stream_input = @can_stream ? task_info(task)[:input_options].select{|k,o| o[:stream] }.collect{|k,o| k }.first : nil
     RemoteStep.new(url, task, name, fixed_inputs, task_info[:result_type], task_info[:result_description], @exec_exports.include?(task), @stream_exports.include?(task), stream_input)
   end

data/lib/rbbt/rest/client/get.rb

@@ -84,7 +84,11 @@ class WorkflowRESTClient
     res = capture_exception do
       Misc.insist(2, 0.5) do
         Log.debug{ "RestClient clean: #{ url } - #{Misc.fingerprint params}" }
-        res = RestClient.get(self.encode(url), :params => params)
+        res = begin 
+                RestClient.get(self.encode(url), :params => params)
+              rescue RestClient::NotFound
+                return nil
+              end
         raise TryAgain if res.code == 202
         res
       end

data/lib/rbbt/rest/client/run.rb

@@ -69,7 +69,6 @@ class WorkflowRESTClient::RemoteStep
                      err.rewind
                      err.read
                    end
-            iii text
             ne = WorkflowRESTClient.parse_exception text
             case ne
             when String
@@ -82,23 +81,37 @@ class WorkflowRESTClient::RemoteStep
           end
         end
 
-        Log.debug{ "RestClient execute: #{ url } - #{Misc.fingerprint task_params}" }
+        task_params.each do |k,v|
+          task_params[k] = v.read if IO === v
+        end
+
+        Log.debug{ "RestClient execute: #{ task_url } - #{Misc.fingerprint task_params}" }
         RestClient::Request.execute(:method => :post, :url => task_url, :payload => task_params, :block_response => bl)
       end
 
-      reader = Zlib::GzipReader.new(sout)
-      res_io = Misc.open_pipe do |sin|
-        while c = reader.read(Misc::BLOCK_SIZE)
-          sin.write c
+      # It seems like now response body are now decoded by Net::HTTP after 2.1
+      # https://github.com/rest-client/rest-client/blob/cf3e5a115bcdb8f3344aeac0e45b44d67fac1a42/history.md
+      decode = Gem.loaded_specs["rest-client"].version < Gem::Version.create('2.1')
+      if decode
+        reader = Zlib::GzipReader.new(sout)
+        res_io = Misc.open_pipe do |sin|
+          while c = reader.read(Misc::BLOCK_SIZE)
+            sin.write c
+          end
+          sin.close
+          @done = true
+        end
+        ConcurrentStream.setup(res_io, :threads => [post_thread]) do
+          @done = true
+          @streaming = false
+        end
+      else
+        ConcurrentStream.setup(sout, :threads => [post_thread]) do
+          @done = true
+          @streaming = false
         end
-        sin.close
-        @done = true
       end
 
-      ConcurrentStream.setup(res_io, :threads => [post_thread]) do
-        @done = true
-        @streaming = false
-      end
     end
   end
 

data/share/rbbt_commands/app/start

@@ -73,6 +73,7 @@ Misc.in_dir(app_dir) do
     options[:options].split(";").each do |pair|
       name, _sep, value = pair.partition("=")
       name = name[1..-1].to_sym if name[0] == ':'
+      value = value.to_i if value =~ /^\d+$/
       options[name] = value
     end
   end

data/share/rbbt_commands/benchmark/throughput

@@ -28,3 +28,5 @@ bar = Log::ProgressBar.new_bar nil, :desc => "Throughput"
 while line = STDIN.gets
   bar.tick
 end
+
+bar.done

data/share/rbbt_commands/workflow/install

@@ -18,6 +18,9 @@ repo is not specified then 'http://github.com/Rbbt-Workflows/' will be used. If
 the workflow is already installed it will be updated. If 'all' is specified
 instead of a particular workflow, all installed workflows will be updated.
 
+You can set the environment variable RBBT_WORKFLOW_AUTOINSTALL=true to make
+workflows install automatically as required.
+
 -h--help Print this help
 
 EOF

data/share/rbbt_commands/workflow/task

@@ -397,7 +397,8 @@ begin
 
     job.fork
   else
-    job.run(:stream)
+    nostream = options[:printname] || options[:printpath]
+    job.run(nostream ? false : :stream)
     res = job
   end
 

metadata

@@ -1,14 +1,14 @@
 --- !ruby/object:Gem::Specification
 name: rbbt-util
 version: !ruby/object:Gem::Version
-  version: 5.26.71
+  version: 5.26.72
 platform: ruby
 authors:
 - Miguel Vazquez
 autorequire: 
 bindir: bin
 cert_chain: []
-date: 2019-09-05 00:00:00.000000000 Z
+date: 2019-09-06 00:00:00.000000000 Z
 dependencies:
 - !ruby/object:Gem::Dependency
   name: rake