rbbt-util 5.25.21 → 5.25.23

checksums.yaml

@@ -1,7 +1,7 @@
 ---
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-  data.tar.gz: 664396f0c8015466300d81608b1d1a6376ec28c3
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+  data.tar.gz: add6d584634f667abea0d292d96fb724b6f0bf8b
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data/lib/rbbt/hpc.rb

@@ -160,9 +160,9 @@ EOF
           group = File.basename(File.dirname(ENV['HOME']))
           scratch_group_dir = File.join('/gpfs/scratch/', group)
           projects_group_dir = File.join('/gpfs/projects/', group)
-          exec_cmd = %(singularity exec -e -C -H "$CONTAINER_DIR" -B "$SINGULARITY_RUBY_INLINE":"$CONTAINER_DIR/.ruby_inline":rw  -B ~/git:"$CONTAINER_DIR/git":ro -B #{scratch_group_dir}:"$CONTAINER_DIR/scratch":ro -B ~/.rbbt/software/opt/:"/opt/":ro  -B ~/.rbbt:"$CONTAINER_DIR/home/":ro -B #{projects_group_dir}:"$CONTAINER_DIR/projects":ro "$SINGULARITY_IMG" env TMPDIR="$CONTAINER_DIR/.rbbt/tmp" rbbt)
+          exec_cmd = %(singularity exec -e -C -H "$CONTAINER_DIR" -B /apps/ -B "$SINGULARITY_RUBY_INLINE":"$CONTAINER_DIR/.ruby_inline":rw  -B ~/git:"$CONTAINER_DIR/git":ro -B #{scratch_group_dir}:"$CONTAINER_DIR/scratch":ro -B ~/.rbbt/software/opt/:"/opt/":ro  -B ~/.rbbt:"$CONTAINER_DIR/home/":ro -B #{projects_group_dir}:"$CONTAINER_DIR/projects":ro "$SINGULARITY_IMG" env TMPDIR="$CONTAINER_DIR/.rbbt/tmp" rbbt)
         else
-          exec_cmd = %(singularity exec -e -B "$SINGULARITY_RUBY_INLINE":"$HOME/.ruby_inline":rw "$SINGULARITY_IMG" rbbt)
+          exec_cmd = %(singularity exec -e -B /apps/ -B "$SINGULARITY_RUBY_INLINE":"$HOME/.ruby_inline":rw "$SINGULARITY_IMG" rbbt)
         end
 
         if development

metadata

@@ -1,14 +1,14 @@
 --- !ruby/object:Gem::Specification
 name: rbbt-util
 version: !ruby/object:Gem::Version
-  version: 5.25.21
+  version: 5.25.23
 platform: ruby
 authors:
 - Miguel Vazquez
 autorequire: 
 bindir: bin
 cert_chain: []
-date: 2019-01-21 00:00:00.000000000 Z
+date: 2019-01-22 00:00:00.000000000 Z
 dependencies:
 - !ruby/object:Gem::Dependency
   name: rake