rbbt-util 5.21.93 → 5.21.94
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- checksums.yaml +4 -4
- data/lib/rbbt/util/open.rb +1 -1
- metadata +63 -63
checksums.yaml
CHANGED
@@ -1,7 +1,7 @@
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1
1
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---
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2
2
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SHA1:
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3
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-
metadata.gz:
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4
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-
data.tar.gz:
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3
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+
metadata.gz: 93f37afedb8b4b26bd91085eaaef7df99b82a0d8
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4
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+
data.tar.gz: cbfd6a8d879360594894a34dd7345f30245b7082
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5
5
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SHA512:
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6
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-
metadata.gz:
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7
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-
data.tar.gz:
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6
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+
metadata.gz: 5e1cc9aa3f9fafba3994116cd51a0f61bee05fc79ac78ac941d02511168c44a067b32be2205c30f489d50f887713d417ce69c6f2d81aeb4c5c4f353dad32e3ef
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7
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+
data.tar.gz: 110a36619736f08ef430e9da9c51bb79a69bd6352c4f1b4a98970504c9fe1d1dda23d3c6bcc55edb1688cbe3bf3b7f07e4252d06c42a4ba763143d6f612326e6
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data/lib/rbbt/util/open.rb
CHANGED
@@ -10,7 +10,7 @@ module Open
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10
10
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class OpenGzipError < StandardError; end
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11
11
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12
12
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REMOTE_CACHEDIR = File.join(ENV["HOME"], "/tmp/open_cache")
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13
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-
FileUtils.
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13
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+
FileUtils.mkdir_p REMOTE_CACHEDIR unless File.exist? REMOTE_CACHEDIR
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14
14
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15
15
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class << self
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16
16
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attr_accessor :repository_dirs
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metadata
CHANGED
@@ -1,14 +1,14 @@
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1
1
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--- !ruby/object:Gem::Specification
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2
2
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name: rbbt-util
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3
3
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version: !ruby/object:Gem::Version
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4
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-
version: 5.21.
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4
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+
version: 5.21.94
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5
5
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platform: ruby
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6
6
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authors:
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7
7
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- Miguel Vazquez
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8
8
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autorequire:
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9
9
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bindir: bin
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10
10
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cert_chain: []
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11
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-
date: 2017-08-
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11
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+
date: 2017-08-14 00:00:00.000000000 Z
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12
12
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dependencies:
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13
13
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- !ruby/object:Gem::Dependency
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14
14
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name: rake
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@@ -503,88 +503,88 @@ required_rubygems_version: !ruby/object:Gem::Requirement
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|
503
503
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version: '0'
|
504
504
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requirements: []
|
505
505
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rubyforge_project:
|
506
|
-
rubygems_version: 2.6.
|
506
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+
rubygems_version: 2.6.12
|
507
507
|
signing_key:
|
508
508
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specification_version: 4
|
509
509
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summary: Utilities for the Ruby Bioinformatics Toolkit (rbbt)
|
510
510
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test_files:
|
511
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-
- test/
|
511
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+
- test/rbbt/test_entity.rb
|
512
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+
- test/rbbt/workflow/test_doc.rb
|
513
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+
- test/rbbt/workflow/test_step.rb
|
514
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+
- test/rbbt/workflow/step/test_dependencies.rb
|
515
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+
- test/rbbt/workflow/test_task.rb
|
512
516
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- test/rbbt/resource/test_path.rb
|
513
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-
- test/rbbt/
|
514
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-
- test/rbbt/
|
515
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-
- test/rbbt/
|
516
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-
- test/rbbt/
|
517
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-
- test/rbbt/
|
517
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+
- test/rbbt/util/test_colorize.rb
|
518
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+
- test/rbbt/util/misc/test_omics.rb
|
519
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+
- test/rbbt/util/misc/test_pipes.rb
|
520
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+
- test/rbbt/util/misc/test_lock.rb
|
521
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+
- test/rbbt/util/misc/test_multipart_payload.rb
|
522
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+
- test/rbbt/util/misc/test_bgzf.rb
|
518
523
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- test/rbbt/util/test_concurrency.rb
|
519
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-
- test/rbbt/util/test_log.rb
|
520
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-
- test/rbbt/util/test_chain_methods.rb
|
521
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-
- test/rbbt/util/test_simpleopt.rb
|
522
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-
- test/rbbt/util/simpleopt/test_parse.rb
|
523
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-
- test/rbbt/util/simpleopt/test_get.rb
|
524
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-
- test/rbbt/util/simpleopt/test_setup.rb
|
525
524
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- test/rbbt/util/test_cmd.rb
|
526
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-
- test/rbbt/util/test_semaphore.rb
|
527
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-
- test/rbbt/util/concurrency/test_threads.rb
|
528
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-
- test/rbbt/util/concurrency/processes/test_socket.rb
|
529
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-
- test/rbbt/util/concurrency/test_processes.rb
|
530
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-
- test/rbbt/util/test_tmpfile.rb
|
531
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-
- test/rbbt/util/test_open.rb
|
532
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-
- test/rbbt/util/test_filecache.rb
|
533
525
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- test/rbbt/util/R/test_eval.rb
|
534
526
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- test/rbbt/util/R/test_model.rb
|
527
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+
- test/rbbt/util/test_log.rb
|
535
528
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- test/rbbt/util/test_simpleDSL.rb
|
536
529
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- test/rbbt/util/log/test_progress.rb
|
537
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-
- test/rbbt/util/
|
530
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+
- test/rbbt/util/test_tmpfile.rb
|
538
531
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- test/rbbt/util/test_R.rb
|
539
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-
- test/rbbt/util/misc/test_lock.rb
|
540
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-
- test/rbbt/util/misc/test_pipes.rb
|
541
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-
- test/rbbt/util/misc/test_bgzf.rb
|
542
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-
- test/rbbt/util/misc/test_omics.rb
|
543
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-
- test/rbbt/util/misc/test_multipart_payload.rb
|
544
532
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- test/rbbt/util/test_excel2tsv.rb
|
545
533
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- test/rbbt/util/test_misc.rb
|
546
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-
- test/rbbt/
|
547
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-
- test/rbbt/
|
548
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-
- test/rbbt/
|
549
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-
- test/rbbt/
|
550
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-
- test/rbbt/
|
551
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-
- test/rbbt/
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552
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-
- test/rbbt/
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553
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-
- test/rbbt/
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554
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-
- test/rbbt/
|
555
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-
- test/rbbt/
|
556
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-
- test/rbbt/
|
557
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-
- test/rbbt/
|
534
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+
- test/rbbt/util/test_open.rb
|
535
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+
- test/rbbt/util/test_simpleopt.rb
|
536
|
+
- test/rbbt/util/simpleopt/test_parse.rb
|
537
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+
- test/rbbt/util/simpleopt/test_setup.rb
|
538
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+
- test/rbbt/util/simpleopt/test_get.rb
|
539
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+
- test/rbbt/util/test_filecache.rb
|
540
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+
- test/rbbt/util/concurrency/test_processes.rb
|
541
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+
- test/rbbt/util/concurrency/test_threads.rb
|
542
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+
- test/rbbt/util/concurrency/processes/test_socket.rb
|
543
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+
- test/rbbt/util/test_semaphore.rb
|
544
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+
- test/rbbt/util/test_chain_methods.rb
|
545
|
+
- test/rbbt/test_resource.rb
|
546
|
+
- test/rbbt/test_packed_index.rb
|
558
547
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- test/rbbt/tsv/test_change_id.rb
|
559
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-
- test/rbbt/tsv/
|
548
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+
- test/rbbt/tsv/test_attach.rb
|
560
549
|
- test/rbbt/tsv/test_filter.rb
|
550
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+
- test/rbbt/tsv/test_parser.rb
|
551
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+
- test/rbbt/tsv/test_accessor.rb
|
561
552
|
- test/rbbt/tsv/test_matrix.rb
|
562
|
-
- test/rbbt/tsv/test_attach.rb
|
563
|
-
- test/rbbt/tsv/test_manipulate.rb
|
564
553
|
- test/rbbt/tsv/test_field_index.rb
|
565
|
-
- test/rbbt/tsv/test_index.rb
|
566
554
|
- test/rbbt/tsv/test_util.rb
|
567
|
-
- test/rbbt/tsv/
|
568
|
-
- test/rbbt/
|
569
|
-
- test/rbbt/
|
570
|
-
- test/rbbt/
|
571
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-
- test/rbbt/
|
572
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-
- test/rbbt/
|
573
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-
- test/rbbt/
|
574
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-
- test/rbbt/
|
575
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-
- test/rbbt/
|
576
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-
- test/rbbt/
|
577
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-
- test/rbbt/
|
578
|
-
- test/rbbt/
|
579
|
-
- test/rbbt/
|
580
|
-
- test/rbbt/
|
581
|
-
- test/rbbt/annotations/test_util.rb
|
582
|
-
- test/rbbt/test_resource.rb
|
583
|
-
- test/rbbt/persist/tsv/test_tokyocabinet.rb
|
555
|
+
- test/rbbt/tsv/test_index.rb
|
556
|
+
- test/rbbt/tsv/test_parallel.rb
|
557
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+
- test/rbbt/tsv/test_manipulate.rb
|
558
|
+
- test/rbbt/tsv/test_excel.rb
|
559
|
+
- test/rbbt/tsv/parallel/test_through.rb
|
560
|
+
- test/rbbt/tsv/parallel/test_traverse.rb
|
561
|
+
- test/rbbt/tsv/test_stream.rb
|
562
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+
- test/rbbt/test_association.rb
|
563
|
+
- test/rbbt/association/test_database.rb
|
564
|
+
- test/rbbt/association/test_item.rb
|
565
|
+
- test/rbbt/association/test_open.rb
|
566
|
+
- test/rbbt/association/test_util.rb
|
567
|
+
- test/rbbt/association/test_index.rb
|
568
|
+
- test/rbbt/test_knowledge_base.rb
|
584
569
|
- test/rbbt/persist/tsv/test_kyotocabinet.rb
|
585
|
-
- test/rbbt/persist/tsv/test_lmdb.rb
|
586
|
-
- test/rbbt/persist/tsv/test_leveldb.rb
|
587
570
|
- test/rbbt/persist/tsv/test_cdb.rb
|
571
|
+
- test/rbbt/persist/tsv/test_lmdb.rb
|
588
572
|
- test/rbbt/persist/tsv/test_sharder.rb
|
573
|
+
- test/rbbt/persist/tsv/test_leveldb.rb
|
574
|
+
- test/rbbt/persist/tsv/test_tokyocabinet.rb
|
589
575
|
- test/rbbt/persist/test_tsv.rb
|
590
576
|
- test/rbbt/test_tsv.rb
|
577
|
+
- test/rbbt/test_annotations.rb
|
578
|
+
- test/rbbt/test_fix_width_table.rb
|
579
|
+
- test/rbbt/test_workflow.rb
|
580
|
+
- test/rbbt/entity/test_identifiers.rb
|
581
|
+
- test/rbbt/annotations/test_util.rb
|
582
|
+
- test/rbbt/test_monitor.rb
|
583
|
+
- test/rbbt/test_persist.rb
|
584
|
+
- test/rbbt/knowledge_base/test_entity.rb
|
585
|
+
- test/rbbt/knowledge_base/test_registry.rb
|
586
|
+
- test/rbbt/knowledge_base/test_syndicate.rb
|
587
|
+
- test/rbbt/knowledge_base/test_query.rb
|
588
|
+
- test/rbbt/knowledge_base/test_enrichment.rb
|
589
|
+
- test/rbbt/knowledge_base/test_traverse.rb
|
590
|
+
- test/test_helper.rb
|