rbbt-util 5.21.13 → 5.21.14

checksums.yaml

@@ -1,7 +1,7 @@
 ---
 SHA1:
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-  data.tar.gz: 9c6ad7d0a952e326608b4d0ff64fb5d1b45a5c20
+  metadata.gz: bc81333fa2224f9798ec8c5f3583e1beb0f0727a
+  data.tar.gz: 82b98cc5e04810f68cab186885573f39c75ff48a
 SHA512:
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+  metadata.gz: 2405bde12c9ec67363ff809a56de15081780d2fdf9f03f6d5156d1271298d9f700212ff09d50cce097f12d40995cbd26479781997477adb3bb1c76dc0bb6f939
+  data.tar.gz: b258f95256da72cb90dafec38c6aea9c26f786f2cb10a6d402d17d26c7414a47691eefa49506fdb23e274aeb0780eb39f15c6c0bc8225499c7bf906943445908

data/lib/rbbt/tsv/stream.rb

@@ -182,6 +182,7 @@ module TSV
               end
             end
 
+            values = [[]] * str.length if values.nil?
             values = values.collect{|list| list * "|" } * sep
 
           else

data/lib/rbbt/util/misc/pipes.rb

@@ -659,7 +659,7 @@ module Misc
     end
   end
 
-  def self.sort_mutations(stream)
+  def self.sort_mutation_stream(stream)
     CMD.cmd('grep ":" | sort -u | sed "s/^M:/MT:/" | env LC_ALL=C sort -k1,1 -k2,2n -t:', :in => stream, :pipe => true, :no_fail => true)
   end
 

metadata

@@ -1,7 +1,7 @@
 --- !ruby/object:Gem::Specification
 name: rbbt-util
 version: !ruby/object:Gem::Version
-  version: 5.21.13
+  version: 5.21.14
 platform: ruby
 authors:
 - Miguel Vazquez