rbbt-util 5.17.37 → 5.17.38

checksums.yaml

@@ -1,7 +1,7 @@
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-  data.tar.gz: fbaa875c7332df4f9a5da2511e85df9e2a3fc938
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data/lib/rbbt/tsv/parallel/traverse.rb

@@ -29,7 +29,7 @@ module TSV
       when Array, Hash
         obj.size
       when File
-        return nil if Open.gzip?(file) or Open.bgzip?(file)
+        return nil if Open.gzip?(obj) or Open.bgzip?(obj)
         CMD.cmd("wc -l '#{obj.filename}'").read.to_i
       when Path, String
         obj = obj.find if Path === obj

data/lib/rbbt/util/log/progress.rb

@@ -45,7 +45,7 @@ module Log
 
         diff = time - @last_time
         report and return if diff > @frequency
-        return unless max
+        return unless max and max > 0
 
         percent = self.percent
         if @last_percent.nil?

data/lib/rbbt/util/misc/omics.rb

@@ -207,7 +207,6 @@ module Misc
   end
 
   def self.intersect_streams_cmp_chr(chr1, chr2)
-    return chr1 <=> chr2
     if chr1 =~ /^\d+$/ and chr2 =~ /^\d+$/
       chr1 <=> chr2
     elsif chr1 =~ /^\d+$/

metadata

@@ -1,14 +1,14 @@
 --- !ruby/object:Gem::Specification
 name: rbbt-util
 version: !ruby/object:Gem::Version
-  version: 5.17.37
+  version: 5.17.38
 platform: ruby
 authors:
 - Miguel Vazquez
 autorequire: 
 bindir: bin
 cert_chain: []
-date: 2015-05-28 00:00:00.000000000 Z
+date: 2015-06-01 00:00:00.000000000 Z
 dependencies:
 - !ruby/object:Gem::Dependency
   name: rake