rbbt-study 0.2.15 → 0.2.16
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- checksums.yaml +8 -8
- data/lib/rbbt/entity/study.rb +17 -0
- metadata +2 -2
checksums.yaml
CHANGED
@@ -1,15 +1,15 @@
|
|
1
1
|
---
|
2
2
|
!binary "U0hBMQ==":
|
3
3
|
metadata.gz: !binary |-
|
4
|
-
|
4
|
+
YTNhYWFhNWNlNzdhYjEyMzg3MThiYzllMzYxYmJkNmY0ZDEyZTcxNw==
|
5
5
|
data.tar.gz: !binary |-
|
6
|
-
|
6
|
+
MjkxZDA5M2EyZjFiN2ZlNGI3ZGExMDBmMjczY2Y1ZTRhMDQ5OWI1Yw==
|
7
7
|
SHA512:
|
8
8
|
metadata.gz: !binary |-
|
9
|
-
|
10
|
-
|
11
|
-
|
9
|
+
YmM3ZmE4OGVmOTVhNDg4NWQ0N2E1NTM2Nzc2Zjg3NzFlNDgxZmI4NDNhNmE2
|
10
|
+
Mzg2N2I5NDlhNGY1MzE0Yjk1MmEwODRlY2QyMGFhZDdlNTgwMzlhNDU0OWRl
|
11
|
+
NzU3ZjQzNDE4MGZhODg1ZTY1NGRjMTMyZDRhNThhZGRkNzZlN2I=
|
12
12
|
data.tar.gz: !binary |-
|
13
|
-
|
14
|
-
|
15
|
-
|
13
|
+
YmMyNmE2MTg5MTE0MWE4ODBiYzg0Njc3ZWMwMzBmNDg0YzljM2UxMjcwZGIy
|
14
|
+
NDgzZTM0NTljNTI0MTlhZDE1OWZlOWRkOWY2NTM4OGNlNTIxNTU2ZmYzODA0
|
15
|
+
NDU2MDlhZmVmNjc0ZGMxYmNlMDQ0YTg4M2MyZDA2MTQ5NDk3NTg=
|
data/lib/rbbt/entity/study.rb
CHANGED
@@ -105,6 +105,23 @@ module Study
|
|
105
105
|
select{|f| File.directory? f}.sort.collect{|s| Study.setup(File.basename(s))}
|
106
106
|
end
|
107
107
|
|
108
|
+
def self.studies
|
109
|
+
case study_dir
|
110
|
+
when nil
|
111
|
+
[]
|
112
|
+
when Path
|
113
|
+
study_dir.find_all.collect do |study_path|
|
114
|
+
study_path.glob('*').select{|f| f.directory? }
|
115
|
+
end.flatten.collect{|f| self.annotate f}
|
116
|
+
else
|
117
|
+
Dir.glob(File.join(study_dir, "*"))
|
118
|
+
end.sort.collect do |dir|
|
119
|
+
study = Study.setup(File.basename(dir))
|
120
|
+
study.dir = study_dir.annotate(dir)
|
121
|
+
study
|
122
|
+
end
|
123
|
+
end
|
124
|
+
|
108
125
|
def dir
|
109
126
|
@dir ||= if Path === Study.study_dir
|
110
127
|
Study.study_dir[self]
|
metadata
CHANGED
@@ -1,14 +1,14 @@
|
|
1
1
|
--- !ruby/object:Gem::Specification
|
2
2
|
name: rbbt-study
|
3
3
|
version: !ruby/object:Gem::Version
|
4
|
-
version: 0.2.
|
4
|
+
version: 0.2.16
|
5
5
|
platform: ruby
|
6
6
|
authors:
|
7
7
|
- Miguel Vazquez
|
8
8
|
autorequire:
|
9
9
|
bindir: bin
|
10
10
|
cert_chain: []
|
11
|
-
date: 2013-11-
|
11
|
+
date: 2013-11-25 00:00:00.000000000 Z
|
12
12
|
dependencies: []
|
13
13
|
description: This gem add the study entity with suport for NGS, Microarray and other
|
14
14
|
types of data
|