rbbt-sources 3.2.9 → 3.2.10
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- checksums.yaml +4 -4
- data/lib/rbbt/sources/organism.rb +1 -0
- metadata +12 -12
checksums.yaml
CHANGED
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@@ -1,7 +1,7 @@
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1
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---
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2
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SHA256:
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3
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-
metadata.gz:
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4
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-
data.tar.gz:
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3
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+
metadata.gz: 11d9b944f87f8b7794a5c8514aaa8a472bc66d6699b96cbf4c7092af69ae1f72
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4
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data.tar.gz: '096c7bcd009caddf4846b8c7da76236db9ae848eef6965dbd77f9e6debe32484'
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5
5
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SHA512:
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6
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-
metadata.gz:
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7
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-
data.tar.gz:
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6
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+
metadata.gz: 0257f816289ff190a5bbb13139ce39571a1d32e37146624b8bf952ae2e67d0afac32d2bd210b27090879379a262e135a968f3c543202825f67b38addab43a0f6
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7
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data.tar.gz: bf5506cac9ea24dfd5b781ad9a81def07e7fc96c949554dbd373b3dc0409c64e81b3f0cb3510cc046c96be9ec59c340a68fe8de10e27e55021be2f1780ef3479
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@@ -69,6 +69,7 @@ module Organism
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69
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end
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Rbbt.claim Rbbt.software.opt.bin.liftOver, :proc do |file|
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72
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Open.mkdir File.dirname(file) unless File.directory?(file)
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url = "http://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/liftOver"
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CMD.cmd_log("wget '#{url}' -O '#{file}' && chmod +rx #{file}")
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end
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metadata
CHANGED
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@@ -1,14 +1,14 @@
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1
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--- !ruby/object:Gem::Specification
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name: rbbt-sources
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version: !ruby/object:Gem::Version
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4
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-
version: 3.2.
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4
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version: 3.2.10
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platform: ruby
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authors:
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- Miguel Vazquez
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autorequire:
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bindir: bin
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cert_chain: []
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11
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-
date: 2023-03-
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11
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date: 2023-03-28 00:00:00.000000000 Z
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dependencies:
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- !ruby/object:Gem::Dependency
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name: rbbt-util
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@@ -183,19 +183,19 @@ signing_key:
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specification_version: 4
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summary: Data sources for the Ruby Bioinformatics Toolkit (rbbt)
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test_files:
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186
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-
- test/rbbt/sources/test_HPRD.rb
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187
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-
- test/rbbt/sources/test_biomart.rb
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188
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- test/rbbt/sources/test_entrez.rb
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189
186
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- test/rbbt/sources/test_go.rb
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190
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- test/rbbt/sources/test_gscholar.rb
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191
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- test/rbbt/sources/test_kegg.rb
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192
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- test/rbbt/sources/test_matador.rb
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193
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- test/rbbt/sources/test_organism.rb
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194
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- test/rbbt/sources/test_pharmagkb.rb
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195
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-
- test/rbbt/sources/test_pina.rb
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196
187
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- test/rbbt/sources/test_pubmed.rb
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188
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- test/rbbt/sources/test_pina.rb
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189
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- test/rbbt/sources/test_pharmagkb.rb
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190
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+
- test/rbbt/sources/test_organism.rb
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191
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+
- test/rbbt/sources/test_synapse.rb
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192
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+
- test/rbbt/sources/test_entrez.rb
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- test/rbbt/sources/test_stitch.rb
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194
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- test/rbbt/sources/test_biomart.rb
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195
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- test/rbbt/sources/test_HPRD.rb
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- test/rbbt/sources/test_string.rb
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199
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-
- test/rbbt/sources/
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197
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+
- test/rbbt/sources/test_kegg.rb
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- test/rbbt/sources/test_tfacts.rb
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199
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+
- test/rbbt/sources/test_matador.rb
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200
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- test/rbbt/sources/test_gscholar.rb
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- test/test_helper.rb
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