rbbt-sources 3.1.5 → 3.1.7

checksums.yaml

@@ -1,7 +1,7 @@
 ---
 SHA1:
-  metadata.gz: 13b53e4812fd99d592f59d165ec4c04cae648a96
-  data.tar.gz: dc6398a012096ff044ecfa7addb5edb34172c574
+  metadata.gz: 1a2f9d5c13961a7fa8a3c948367f312ad15ae555
+  data.tar.gz: e6ec67742de00219a229d9cc4db6bc4a6fff67fd
 SHA512:
-  metadata.gz: a55d8d96d5d98ad1a2487abd1bc67f6f2356b0a6acd04f0cb3354c6b63f3d8a7d950085cae4403497298b436ffa9afbe94c74f38c58dfb8ac2278bdbf4e28406
-  data.tar.gz: 8a0669a043d2f959463cd0ec8d36017a48ae78f3153807aa665f51f329c9c1f4e17075337242c01c92f19fe71a18a898f6808d43f41f245fdcd62b6652353dd4
+  metadata.gz: 0f06fd95e0e4ad122ebbd35bca6cd878de70ee2cc251e99296d055cdbefa055132daf0329f3f2491624e905ac7dad5fb63edada9a88da027639afe2dc8e4e307
+  data.tar.gz: f85b6b37937b24c7a282a0d07c2e567e4db3bb816ef40a12d31f7eaf65bcbe3c1886cad923a73e6732394325161ff7750bf76dba8100aa5db3d91f0224498342

data/lib/rbbt/sources/clinvar.rb

@@ -74,5 +74,3 @@ module ClinVar
   end
 end
 
-iif ClinVar.mi_summary.produce(true).find if __FILE__ == $0
-

data/lib/rbbt/sources/uniprot.rb

@@ -150,7 +150,7 @@ module UniProt
       when value.match(/(\d+) (\d+) (.*)/)
         start, eend, description = $1, $2, $3
         description.gsub(/^FT\s+/m, '')
-      when value.match(/(\d+) (\d+)/)
+      when value.match(/^\s+(\d+) (\d+)/)
         start, eend = $1, $2
         description = nil
       else

metadata

@@ -1,14 +1,14 @@
 --- !ruby/object:Gem::Specification
 name: rbbt-sources
 version: !ruby/object:Gem::Version
-  version: 3.1.5
+  version: 3.1.7
 platform: ruby
 authors:
 - Miguel Vazquez
 autorequire: 
 bindir: bin
 cert_chain: []
-date: 2015-12-17 00:00:00.000000000 Z
+date: 2016-09-06 00:00:00.000000000 Z
 dependencies:
 - !ruby/object:Gem::Dependency
   name: rbbt-util
@@ -180,19 +180,19 @@ signing_key:
 specification_version: 4
 summary: Data sources for the Ruby Bioinformatics Toolkit (rbbt)
 test_files:
+- test/test_helper.rb
 - test/rbbt/sources/test_pubmed.rb
-- test/rbbt/sources/test_pharmagkb.rb
-- test/rbbt/sources/test_biomart.rb
+- test/rbbt/sources/test_string.rb
 - test/rbbt/sources/test_gscholar.rb
-- test/rbbt/sources/test_kegg.rb
+- test/rbbt/sources/test_biomart.rb
+- test/rbbt/sources/test_go.rb
 - test/rbbt/sources/test_pina.rb
 - test/rbbt/sources/test_entrez.rb
+- test/rbbt/sources/test_pharmagkb.rb
+- test/rbbt/sources/test_organism.rb
 - test/rbbt/sources/test_matador.rb
-- test/rbbt/sources/test_HPRD.rb
+- test/rbbt/sources/test_tfacts.rb
+- test/rbbt/sources/test_kegg.rb
 - test/rbbt/sources/test_synapse.rb
-- test/rbbt/sources/test_go.rb
 - test/rbbt/sources/test_stitch.rb
-- test/rbbt/sources/test_organism.rb
-- test/rbbt/sources/test_string.rb
-- test/rbbt/sources/test_tfacts.rb
-- test/test_helper.rb
+- test/rbbt/sources/test_HPRD.rb